RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 FAM50AQ14320 339 aaKnown RBP18.51■□□□□ 0.55
USP11-208ENST00000480104 ATF5Q9Y2D1 282 aaPredicted RBP18.51■□□□□ 0.55
USP11-208ENST00000480104 PLEKHH1Q9ULM0 1364 aa18.51■□□□□ 0.55
USP11-208ENST00000480104 DLC1Q96QB1 1528 aa18.5■□□□□ 0.55
USP11-208ENST00000480104 NRXN1Q9ULB1 1477 aa18.5■□□□□ 0.55
USP11-208ENST00000480104 TECPR2O15040 1411 aa18.49■□□□□ 0.55
USP11-208ENST00000480104 PDE3BQ13370 1112 aa18.48■□□□□ 0.55
USP11-208ENST00000480104 STK26Q9P289 416 aa18.48■□□□□ 0.55
USP11-208ENST00000480104 SHANK3Q9BYB0 1731 aa18.47■□□□□ 0.55
USP11-208ENST00000480104 PRDM11Q9NQV5 511 aa18.45■□□□□ 0.54
USP11-208ENST00000480104 STRN4Q9NRL3 753 aa18.43■□□□□ 0.54
USP11-208ENST00000480104 USP35Q9P2H5 1018 aa18.43■□□□□ 0.54
USP11-208ENST00000480104 GPR162Q16538 588 aa18.42■□□□□ 0.54
USP11-208ENST00000480104 SGIP1Q9BQI5 828 aa18.42■□□□□ 0.54
USP11-208ENST00000480104 RGPD8O14715 1765 aaPredicted RBP18.42■□□□□ 0.54
USP11-208ENST00000480104 KIF1BO60333 1816 aa18.42■□□□□ 0.54
USP11-208ENST00000480104 RGPD3A6NKT7 1758 aaPredicted RBP18.41■□□□□ 0.54
USP11-208ENST00000480104 RGPD4Q7Z3J3 1758 aa18.41■□□□□ 0.54
USP11-208ENST00000480104 HSPA6P17066 643 aa18.41■□□□□ 0.54
USP11-208ENST00000480104 BCL11BQ9C0K0 894 aaPredicted RBP18.41■□□□□ 0.54
USP11-208ENST00000480104 BARGINQ6ZT62 677 aa18.4■□□□□ 0.54
USP11-208ENST00000480104 MAP3K5Q99683 1374 aa18.4■□□□□ 0.54
USP11-208ENST00000480104 TRPM3Q9HCF6 1732 aaPredicted RBP18.4■□□□□ 0.54
USP11-208ENST00000480104 IFT172Q9UG01 1749 aa18.39■□□□□ 0.53
USP11-208ENST00000480104 ROCK1Q13464 1354 aa18.39■□□□□ 0.53
USP11-208ENST00000480104 ABCC11Q96J66 1382 aa18.39■□□□□ 0.53
USP11-208ENST00000480104 ALS2Q96Q42 1657 aa18.38■□□□□ 0.53
USP11-208ENST00000480104 PLSCR1O15162 318 aa18.38■□□□□ 0.53
USP11-208ENST00000480104 CAPN15O75808 1086 aa18.38■□□□□ 0.53
USP11-208ENST00000480104 CHRNA2Q15822 529 aa18.38■□□□□ 0.53
USP11-208ENST00000480104 PMFBP1Q8TBY8 1022 aa18.38■□□□□ 0.53
USP11-208ENST00000480104 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
USP11-208ENST00000480104 RPGRIP1LQ68CZ1 1315 aa18.38■□□□□ 0.53
USP11-208ENST00000480104 KIAA0232Q92628 1395 aa18.38■□□□□ 0.53
USP11-208ENST00000480104 ARXQ96QS3 562 aa18.37■□□□□ 0.53
USP11-208ENST00000480104 KNDC1Q76NI1 1749 aa18.36■□□□□ 0.53
USP11-208ENST00000480104 CRYBG1Q9Y4K1 1723 aa18.36■□□□□ 0.53
USP11-208ENST00000480104 PROM2Q8N271 834 aa18.35■□□□□ 0.53
USP11-208ENST00000480104 PPLO60437 1756 aa18.35■□□□□ 0.53
USP11-208ENST00000480104 SSH2Q76I76 1423 aa18.34■□□□□ 0.53
USP11-208ENST00000480104 APLP2Q06481 763 aa18.34■□□□□ 0.53
USP11-208ENST00000480104 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
USP11-208ENST00000480104 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.52
USP11-208ENST00000480104 PTF1AQ7RTS3 328 aa18.33■□□□□ 0.52
USP11-208ENST00000480104 STK32BQ9NY57 414 aa18.33■□□□□ 0.52
USP11-208ENST00000480104 OVOS2A0A0G2JMS6 1433 aa18.32■□□□□ 0.52
USP11-208ENST00000480104 OVOS2A0A0J9YW53 1432 aa18.32■□□□□ 0.52
USP11-208ENST00000480104 OVOS2Q6IE36 1432 aa18.32■□□□□ 0.52
USP11-208ENST00000480104 ADGRF5Q8IZF2 1346 aa18.32■□□□□ 0.52
USP11-208ENST00000480104 TCP11L2Q8N4U5 519 aa18.32■□□□□ 0.52
USP11-208ENST00000480104 ATP10DQ9P241 1426 aa18.32■□□□□ 0.52
USP11-208ENST00000480104 PEAK1Q9H792 1746 aa18.31■□□□□ 0.52
USP11-208ENST00000480104 GPRASP1Q5JY77 1395 aa18.3■□□□□ 0.52
USP11-208ENST00000480104 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
USP11-208ENST00000480104 C11orf95C9JLR9 678 aaPredicted RBP18.3■□□□□ 0.52
USP11-208ENST00000480104 SLC15A2Q16348 729 aa18.3■□□□□ 0.52
USP11-208ENST00000480104 LARP1Q6PKG0 1096 aaKnown RBP18.3■□□□□ 0.52
USP11-208ENST00000480104 YTHDC2Q9H6S0 1430 aaKnown RBP18.3■□□□□ 0.52
USP11-208ENST00000480104 EVA1CP58658 441 aa18.29■□□□□ 0.52
USP11-208ENST00000480104 ANKARQ7Z5J8 1434 aa18.29■□□□□ 0.52
USP11-208ENST00000480104 SLC34A2O95436 690 aa18.28■□□□□ 0.52
USP11-208ENST00000480104 PARP4Q9UKK3 1724 aaKnown RBP18.27■□□□□ 0.52
USP11-208ENST00000480104 ZC3H6P61129 1189 aaKnown RBP18.27■□□□□ 0.52
USP11-208ENST00000480104 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
USP11-208ENST00000480104 COL13A1Q5TAT6 717 aaPredicted RBP18.26■□□□□ 0.51
USP11-208ENST00000480104 KLHL34Q8N239 644 aa18.26■□□□□ 0.51
USP11-208ENST00000480104 GPBP1L1Q9HC44 474 aaPredicted RBP18.26■□□□□ 0.51
USP11-208ENST00000480104 SAFB2Q14151 953 aaKnown RBP eCLIP18.25■□□□□ 0.51
USP11-208ENST00000480104 TXNRD1Q16881 649 aa18.25■□□□□ 0.51
USP11-208ENST00000480104 SBF2Q86WG5 1849 aa18.24■□□□□ 0.51
USP11-208ENST00000480104 ATP7BP35670 1465 aa18.24■□□□□ 0.51
USP11-208ENST00000480104 PCNTO95613 3336 aa18.23■□□□□ 0.51
USP11-208ENST00000480104 PRELPP51888 382 aa18.23■□□□□ 0.51
USP11-208ENST00000480104 SIRT1Q96EB6 747 aa18.23■□□□□ 0.51
USP11-208ENST00000480104 THRAP3Q9Y2W1 955 aaKnown RBP18.23■□□□□ 0.51
USP11-208ENST00000480104 PHRF1Q9P1Y6 1649 aaKnown RBP18.23■□□□□ 0.51
USP11-208ENST00000480104 YBX3P16989 372 aaKnown RBP eCLIP18.21■□□□□ 0.51
USP11-208ENST00000480104 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
USP11-208ENST00000480104 NLGN2Q8NFZ4 835 aa18.2■□□□□ 0.5
USP11-208ENST00000480104 ZNF526Q8TF50 670 aaPredicted RBP18.2■□□□□ 0.5
USP11-208ENST00000480104 LRRC37A3O60309 1634 aa18.2■□□□□ 0.5
USP11-208ENST00000480104 PIK3C2GO75747 1445 aa18.19■□□□□ 0.5
USP11-208ENST00000480104 PRAM1Q96QH2 718 aa18.19■□□□□ 0.5
USP11-208ENST00000480104 PRR36Q9H6K5 1346 aa18.19■□□□□ 0.5
USP11-208ENST00000480104 TNS4Q8IZW8 715 aa18.18■□□□□ 0.5
USP11-208ENST00000480104 DNAJC5GQ8N7S2 189 aa18.18■□□□□ 0.5
USP11-208ENST00000480104 GRIN3BO60391 1043 aa18.17■□□□□ 0.5
USP11-208ENST00000480104 APLP1P51693 650 aa18.17■□□□□ 0.5
USP11-208ENST00000480104 NUTM2GQ5VZR2 741 aa18.17■□□□□ 0.5
USP11-208ENST00000480104 LMO7Q8WWI1 1683 aa18.17■□□□□ 0.5
USP11-208ENST00000480104 ADCY9O60503 1353 aa18.17■□□□□ 0.5
USP11-208ENST00000480104 AATKQ6ZMQ8 1374 aa18.17■□□□□ 0.5
USP11-208ENST00000480104 ITGAEP38570 1179 aa18.16■□□□□ 0.5
USP11-208ENST00000480104 DDB1Q16531 1140 aa18.16■□□□□ 0.5
USP11-208ENST00000480104 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
USP11-208ENST00000480104 COL5A2P05997 1499 aaPredicted RBP18.14■□□□□ 0.5
USP11-208ENST00000480104 ANKRD30BQ9BXX2 1392 aa18.14■□□□□ 0.49
USP11-208ENST00000480104 BCL9O00512 1426 aa18.14■□□□□ 0.49
USP11-208ENST00000480104 MARCH10Q8NA82 808 aaPredicted RBP18.13■□□□□ 0.49
USP11-208ENST00000480104 HIRIP3Q9BW71 556 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms