RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 SPATA31A1Q5TZJ5 1347 aa16.89■□□□□ 0.29
CCDC18-208ENST00000479653 TNS1Q9HBL0 1735 aaKnown RBP16.88■□□□□ 0.29
CCDC18-208ENST00000479653 NRXN1Q9ULB1 1477 aa16.87■□□□□ 0.29
CCDC18-208ENST00000479653 FMN2Q9NZ56 1722 aa16.87■□□□□ 0.29
CCDC18-208ENST00000479653 PAK3O75914 559 aaPredicted RBP16.86■□□□□ 0.29
CCDC18-208ENST00000479653 NRAPQ86VF7 1730 aa16.85■□□□□ 0.29
CCDC18-208ENST00000479653 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
CCDC18-208ENST00000479653 SIRT1Q96EB6 747 aa16.85■□□□□ 0.29
CCDC18-208ENST00000479653 SLC4A1APQ9BWU0 796 aaKnown RBP16.85■□□□□ 0.29
CCDC18-208ENST00000479653 GPRASP1Q5JY77 1395 aa16.85■□□□□ 0.29
CCDC18-208ENST00000479653 EVA1CP58658 441 aa16.84■□□□□ 0.29
CCDC18-208ENST00000479653 YTHDC2Q9H6S0 1430 aaKnown RBP16.84■□□□□ 0.29
CCDC18-208ENST00000479653 COL14A1Q05707 1796 aaKnown RBP16.83■□□□□ 0.28
CCDC18-208ENST00000479653 RRBP1Q9P2E9 1410 aaKnown RBP16.83■□□□□ 0.28
CCDC18-208ENST00000479653 THSD7AQ9UPZ6 1657 aa16.83■□□□□ 0.28
CCDC18-208ENST00000479653 ABCA3Q99758 1704 aa16.82■□□□□ 0.28
CCDC18-208ENST00000479653 PRAM1Q96QH2 718 aa16.82■□□□□ 0.28
CCDC18-208ENST00000479653 CAMTA1Q9Y6Y1 1673 aa16.81■□□□□ 0.28
CCDC18-208ENST00000479653 ZBTB7AO95365 584 aa16.81■□□□□ 0.28
CCDC18-208ENST00000479653 POGKQ9P215 609 aa16.81■□□□□ 0.28
CCDC18-208ENST00000479653 PPLO60437 1756 aa16.81■□□□□ 0.28
CCDC18-208ENST00000479653 ZC3H6P61129 1189 aaKnown RBP16.8■□□□□ 0.28
CCDC18-208ENST00000479653 KIAA0232Q92628 1395 aa16.79■□□□□ 0.28
CCDC18-208ENST00000479653 ANKRD30BQ9BXX2 1392 aa16.79■□□□□ 0.28
CCDC18-208ENST00000479653 ACIN1Q9UKV3 1341 aaKnown RBP16.79■□□□□ 0.28
CCDC18-208ENST00000479653 BARGINQ6ZT62 677 aa16.79■□□□□ 0.28
CCDC18-208ENST00000479653 NGDNQ8NEJ9 315 aaKnown RBP16.79■□□□□ 0.28
CCDC18-208ENST00000479653 PDGFDQ9GZP0 370 aaPredicted RBP16.79■□□□□ 0.28
CCDC18-208ENST00000479653 ATF5Q9Y2D1 282 aaPredicted RBP16.79■□□□□ 0.28
CCDC18-208ENST00000479653 RGPD8O14715 1765 aaPredicted RBP16.78■□□□□ 0.28
CCDC18-208ENST00000479653 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.28
CCDC18-208ENST00000479653 NUP188Q5SRE5 1749 aa16.77■□□□□ 0.28
CCDC18-208ENST00000479653 PPARGC1BQ86YN6 1023 aaKnown RBP16.77■□□□□ 0.28
CCDC18-208ENST00000479653 SYT17Q9BSW7 474 aa16.77■□□□□ 0.28
CCDC18-208ENST00000479653 HIRIP3Q9BW71 556 aaPredicted RBP16.77■□□□□ 0.28
CCDC18-208ENST00000479653 BCL11BQ9C0K0 894 aaPredicted RBP16.77■□□□□ 0.28
CCDC18-208ENST00000479653 RREB1Q92766 1687 aa16.76■□□□□ 0.27
CCDC18-208ENST00000479653 TCP11L2Q8N4U5 519 aa16.76■□□□□ 0.27
CCDC18-208ENST00000479653 FHDC1Q9C0D6 1143 aaPredicted RBP16.76■□□□□ 0.27
CCDC18-208ENST00000479653 ANO8Q9HCE9 1232 aaPredicted RBP16.76■□□□□ 0.27
CCDC18-208ENST00000479653 CFAP70Q5T0N1 1121 aa16.75■□□□□ 0.27
CCDC18-208ENST00000479653 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
CCDC18-208ENST00000479653 C14orf93Q9H972 538 aaKnown RBP16.75■□□□□ 0.27
CCDC18-208ENST00000479653 ANKARQ7Z5J8 1434 aa16.75■□□□□ 0.27
CCDC18-208ENST00000479653 CEP350Q5VT06 3117 aa16.75■□□□□ 0.27
CCDC18-208ENST00000479653 GIGYF1O75420 1035 aaPredicted RBP16.74■□□□□ 0.27
CCDC18-208ENST00000479653 PTGER2P43116 358 aa16.74■□□□□ 0.27
CCDC18-208ENST00000479653 NUTM2GQ5VZR2 741 aa16.74■□□□□ 0.27
CCDC18-208ENST00000479653 KNDC1Q76NI1 1749 aa16.73■□□□□ 0.27
CCDC18-208ENST00000479653 IFT172Q9UG01 1749 aa16.73■□□□□ 0.27
CCDC18-208ENST00000479653 PIK3C2GO75747 1445 aa16.73■□□□□ 0.27
CCDC18-208ENST00000479653 PLSCR1O15162 318 aa16.73■□□□□ 0.27
CCDC18-208ENST00000479653 NRKQ7Z2Y5 1582 aa16.72■□□□□ 0.27
CCDC18-208ENST00000479653 C11orf95C9JLR9 678 aaPredicted RBP16.72■□□□□ 0.27
CCDC18-208ENST00000479653 MINK1Q8N4C8 1332 aaPredicted RBP16.71■□□□□ 0.27
CCDC18-208ENST00000479653 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
CCDC18-208ENST00000479653 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
CCDC18-208ENST00000479653 GPR162Q16538 588 aa16.69■□□□□ 0.26
CCDC18-208ENST00000479653 STK32BQ9NY57 414 aa16.69■□□□□ 0.26
CCDC18-208ENST00000479653 THRAP3Q9Y2W1 955 aaKnown RBP16.69■□□□□ 0.26
CCDC18-208ENST00000479653 TRPM3Q9HCF6 1732 aaPredicted RBP16.69■□□□□ 0.26
CCDC18-208ENST00000479653 SPATA31E1Q6ZUB1 1445 aa16.69■□□□□ 0.26
CCDC18-208ENST00000479653 ALS2Q96Q42 1657 aa16.69■□□□□ 0.26
CCDC18-208ENST00000479653 PTF1AQ7RTS3 328 aa16.68■□□□□ 0.26
CCDC18-208ENST00000479653 TRAK1Q9UPV9 953 aa16.68■□□□□ 0.26
CCDC18-208ENST00000479653 WASLO00401 505 aaPredicted RBP16.67■□□□□ 0.26
CCDC18-208ENST00000479653 PROM2Q8N271 834 aa16.67■□□□□ 0.26
CCDC18-208ENST00000479653 EIF3AQ14152 1382 aaKnown RBP16.66■□□□□ 0.26
CCDC18-208ENST00000479653 MTFR1LQ9H019 292 aa16.66■□□□□ 0.26
CCDC18-208ENST00000479653 OVOS2A0A0G2JMS6 1433 aa16.65■□□□□ 0.26
CCDC18-208ENST00000479653 OVOS2A0A0J9YW53 1432 aa16.65■□□□□ 0.26
CCDC18-208ENST00000479653 OVOS2Q6IE36 1432 aa16.65■□□□□ 0.26
CCDC18-208ENST00000479653 SLC15A2Q16348 729 aa16.65■□□□□ 0.26
CCDC18-208ENST00000479653 ARXQ96QS3 562 aa16.65■□□□□ 0.26
CCDC18-208ENST00000479653 DDB1Q16531 1140 aa16.64■□□□□ 0.25
CCDC18-208ENST00000479653 MYOM1P52179 1685 aa16.64■□□□□ 0.25
CCDC18-208ENST00000479653 ZBTB7CA1YPR0 619 aa16.63■□□□□ 0.25
CCDC18-208ENST00000479653 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
CCDC18-208ENST00000479653 TXNRD1Q16881 649 aa16.62■□□□□ 0.25
CCDC18-208ENST00000479653 ABTB2Q8N961 1025 aa16.62■□□□□ 0.25
CCDC18-208ENST00000479653 KLHL34Q8N239 644 aa16.61■□□□□ 0.25
CCDC18-208ENST00000479653 NUDT16Q96DE0 195 aaKnown RBP16.61■□□□□ 0.25
CCDC18-208ENST00000479653 SGIP1Q9BQI5 828 aa16.61■□□□□ 0.25
CCDC18-208ENST00000479653 CASZ1Q86V15 1759 aa16.61■□□□□ 0.25
CCDC18-208ENST00000479653 TULP4Q9NRJ4 1543 aa16.6■□□□□ 0.25
CCDC18-208ENST00000479653 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
CCDC18-208ENST00000479653 MPHOSPH9Q99550 1183 aa16.59■□□□□ 0.25
CCDC18-208ENST00000479653 DLC1Q96QB1 1528 aa16.58■□□□□ 0.24
CCDC18-208ENST00000479653 GCP02774 474 aa16.57■□□□□ 0.24
CCDC18-208ENST00000479653 TOM1L2Q6ZVM7 507 aa16.57■□□□□ 0.24
CCDC18-208ENST00000479653 MARCH10Q8NA82 808 aaPredicted RBP16.57■□□□□ 0.24
CCDC18-208ENST00000479653 CRB1P82279 1406 aa16.56■□□□□ 0.24
CCDC18-208ENST00000479653 CPDO75976 1380 aa16.56■□□□□ 0.24
CCDC18-208ENST00000479653 ACEP12821 1306 aa16.56■□□□□ 0.24
CCDC18-208ENST00000479653 GOLGB1Q14789 3259 aaKnown RBP16.56■□□□□ 0.24
CCDC18-208ENST00000479653 ATP7BP35670 1465 aa16.55■□□□□ 0.24
CCDC18-208ENST00000479653 CHD4Q14839 1912 aa16.55■□□□□ 0.24
CCDC18-208ENST00000479653 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
CCDC18-208ENST00000479653 PHRF1Q9P1Y6 1649 aaKnown RBP16.54■□□□□ 0.24
CCDC18-208ENST00000479653 CDK19Q9BWU1 502 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms