RNA–Protein interactions for RNA: ENST00000479234.1

SCAF8-206, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-206ENST00000479234 ERBINQ96RT1 1412 aa8.59□□□□□ -1.03
SCAF8-206ENST00000479234 CLASP1Q7Z460 1538 aa8.59□□□□□ -1.03
SCAF8-206ENST00000479234 UNC13BO14795 1591 aa8.58□□□□□ -1.04
SCAF8-206ENST00000479234 PLXNC1O60486 1568 aa8.58□□□□□ -1.04
SCAF8-206ENST00000479234 RTEL1-TNFRSF6BF6WH68 1400 aa8.58□□□□□ -1.04
SCAF8-206ENST00000479234 ST20-MTHFSA0A0A6YYL1 179 aa8.58□□□□□ -1.04
SCAF8-206ENST00000479234 RALBP1Q15311 655 aa8.58□□□□□ -1.04
SCAF8-206ENST00000479234 BCANQ96GW7 911 aa8.58□□□□□ -1.04
SCAF8-206ENST00000479234 SYCP2Q9BX26 1530 aa8.58□□□□□ -1.04
SCAF8-206ENST00000479234 GPRASP1Q5JY77 1395 aa8.58□□□□□ -1.04
SCAF8-206ENST00000479234 KCNC4Q03721 635 aa8.57□□□□□ -1.04
SCAF8-206ENST00000479234 Q6ZNB5 142 aa8.57□□□□□ -1.04
SCAF8-206ENST00000479234 ARAP3Q8WWN8 1544 aa8.57□□□□□ -1.04
SCAF8-206ENST00000479234 BCORL1Q5H9F3 1711 aa8.57□□□□□ -1.04
SCAF8-206ENST00000479234 PLA2R1Q13018 1463 aa8.57□□□□□ -1.04
SCAF8-206ENST00000479234 ERCC6L2Q5T890 1561 aa8.56□□□□□ -1.04
SCAF8-206ENST00000479234 TTC37Q6PGP7 1564 aa8.56□□□□□ -1.04
SCAF8-206ENST00000479234 PRAG1Q86YV5 1406 aa8.56□□□□□ -1.04
SCAF8-206ENST00000479234 EPAS1Q99814 870 aa8.56□□□□□ -1.04
SCAF8-206ENST00000479234 KIAA1468Q9P260 1216 aa8.56□□□□□ -1.04
SCAF8-206ENST00000479234 MYO5CQ9NQX4 1742 aa8.56□□□□□ -1.04
SCAF8-206ENST00000479234 WASHC2CQ9Y4E1 1318 aa8.55□□□□□ -1.04
SCAF8-206ENST00000479234 IQGAP3Q86VI3 1631 aa8.55□□□□□ -1.04
SCAF8-206ENST00000479234 PNISRQ8TF01 805 aaKnown RBP8.55□□□□□ -1.04
SCAF8-206ENST00000479234 POLR3GLQ9BT43 218 aa8.55□□□□□ -1.04
SCAF8-206ENST00000479234 WBP1LQ9NX94 342 aa8.55□□□□□ -1.04
SCAF8-206ENST00000479234 MAGI2Q86UL8 1455 aa8.55□□□□□ -1.04
SCAF8-206ENST00000479234 SPAG9O60271 1321 aaKnown RBP8.54□□□□□ -1.04
SCAF8-206ENST00000479234 BRD4O60885 1362 aaPredicted RBP8.54□□□□□ -1.04
SCAF8-206ENST00000479234 LAPTM4AQ15012 233 aa8.54□□□□□ -1.04
SCAF8-206ENST00000479234 FAM98CQ17RN3 349 aaKnown RBP8.54□□□□□ -1.04
SCAF8-206ENST00000479234 TMC1Q8TDI8 760 aa8.54□□□□□ -1.04
SCAF8-206ENST00000479234 PPP4R2Q9NY27 417 aa8.54□□□□□ -1.04
SCAF8-206ENST00000479234 ZCCHC11Q5TAX3 1644 aaKnown RBP8.54□□□□□ -1.04
SCAF8-206ENST00000479234 MYBBP1AQ9BQG0 1328 aaKnown RBP8.54□□□□□ -1.04
SCAF8-206ENST00000479234 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
SCAF8-206ENST00000479234 RGL3Q3MIN7 710 aa8.53□□□□□ -1.04
SCAF8-206ENST00000479234 ABCC1P33527 1531 aa8.53□□□□□ -1.04
SCAF8-206ENST00000479234 SMG6Q86US8 1419 aaKnown RBP8.53□□□□□ -1.04
SCAF8-206ENST00000479234 TRAPPC8Q9Y2L5 1435 aa8.53□□□□□ -1.04
SCAF8-206ENST00000479234 A2MP01023 1474 aa8.52□□□□□ -1.05
SCAF8-206ENST00000479234 LAMC1P11047 1609 aa8.52□□□□□ -1.05
SCAF8-206ENST00000479234 NBPF1Q3BBV0 1214 aa8.52□□□□□ -1.05
SCAF8-206ENST00000479234 VSIG10Q8N0Z9 540 aa8.52□□□□□ -1.05
SCAF8-206ENST00000479234 SEPT9Q9UHD8 586 aaPredicted RBP8.52□□□□□ -1.05
SCAF8-206ENST00000479234 TSR3Q9UJK0 312 aaKnown RBP8.52□□□□□ -1.05
SCAF8-206ENST00000479234 PER1O15534 1290 aaPredicted RBP8.51□□□□□ -1.05
SCAF8-206ENST00000479234 TMF1P82094 1093 aa8.51□□□□□ -1.05
SCAF8-206ENST00000479234 C6orf132Q5T0Z8 1188 aa8.51□□□□□ -1.05
SCAF8-206ENST00000479234 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.51□□□□□ -1.05
SCAF8-206ENST00000479234 NUDCQ9Y266 331 aa8.51□□□□□ -1.05
SCAF8-206ENST00000479234 TRPM1Q7Z4N2 1603 aa8.51□□□□□ -1.05
SCAF8-206ENST00000479234 INSRP06213 1382 aa8.5□□□□□ -1.05
SCAF8-206ENST00000479234 LRPPRCP42704 1394 aaKnown RBP8.5□□□□□ -1.05
SCAF8-206ENST00000479234 PTPRTO14522 1441 aa8.5□□□□□ -1.05
SCAF8-206ENST00000479234 CAMK2BQ13554 666 aa8.5□□□□□ -1.05
SCAF8-206ENST00000479234 LRCH3Q96II8 777 aa8.5□□□□□ -1.05
SCAF8-206ENST00000479234 TESK2Q96S53 571 aa8.5□□□□□ -1.05
SCAF8-206ENST00000479234 EIF2AK4Q9P2K8 1649 aaKnown RBP8.5□□□□□ -1.05
SCAF8-206ENST00000479234 WDR7Q9Y4E6 1490 aa8.5□□□□□ -1.05
SCAF8-206ENST00000479234 RNF123Q5XPI4 1314 aa8.5□□□□□ -1.05
SCAF8-206ENST00000479234 KANK1Q14678 1352 aa8.49□□□□□ -1.05
SCAF8-206ENST00000479234 NLRP13Q86W25 1043 aa8.49□□□□□ -1.05
SCAF8-206ENST00000479234 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
SCAF8-206ENST00000479234 HPS5Q9UPZ3 1129 aa8.49□□□□□ -1.05
SCAF8-206ENST00000479234 PRDM15P57071 1507 aaPredicted RBP8.49□□□□□ -1.05
SCAF8-206ENST00000479234 PARD3Q8TEW0 1356 aa8.48□□□□□ -1.05
SCAF8-206ENST00000479234 PDE3BQ13370 1112 aa8.48□□□□□ -1.05
SCAF8-206ENST00000479234 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
SCAF8-206ENST00000479234 RBM19Q9Y4C8 960 aaKnown RBP8.48□□□□□ -1.05
SCAF8-206ENST00000479234 COL17A1Q9UMD9 1497 aaPredicted RBP8.47□□□□□ -1.05
SCAF8-206ENST00000479234 SCAPERQ9BY12 1400 aa8.46□□□□□ -1.05
SCAF8-206ENST00000479234 NEURL4Q96JN8 1562 aa8.46□□□□□ -1.06
SCAF8-206ENST00000479234 FANCAO15360 1455 aa8.45□□□□□ -1.06
SCAF8-206ENST00000479234 TRPM2O94759 1503 aa8.45□□□□□ -1.06
SCAF8-206ENST00000479234 ZFYVE16Q7Z3T8 1539 aa8.45□□□□□ -1.06
SCAF8-206ENST00000479234 ABCA9Q8IUA7 1624 aa8.45□□□□□ -1.06
SCAF8-206ENST00000479234 DPYSL4O14531 572 aa8.45□□□□□ -1.06
SCAF8-206ENST00000479234 KIF3BO15066 747 aa8.45□□□□□ -1.06
SCAF8-206ENST00000479234 IRX6P78412 446 aaPredicted RBP8.45□□□□□ -1.06
SCAF8-206ENST00000479234 CADPS2Q86UW7 1296 aa8.45□□□□□ -1.06
SCAF8-206ENST00000479234 PANK3Q9H999 370 aa8.45□□□□□ -1.06
SCAF8-206ENST00000479234 E9PCH4 1651 aa8.45□□□□□ -1.06
SCAF8-206ENST00000479234 ZMYM4Q5VZL5 1548 aa8.44□□□□□ -1.06
SCAF8-206ENST00000479234 VWDEQ8N2E2 1590 aa8.44□□□□□ -1.06
SCAF8-206ENST00000479234 DISP3Q9P2K9 1392 aa8.44□□□□□ -1.06
SCAF8-206ENST00000479234 DEPDC5O75140 1603 aa8.43□□□□□ -1.06
SCAF8-206ENST00000479234 EN1Q05925 392 aaPredicted RBP8.43□□□□□ -1.06
SCAF8-206ENST00000479234 CNGB1Q14028 1251 aaPredicted RBP8.43□□□□□ -1.06
SCAF8-206ENST00000479234 PACS2Q86VP3 889 aa8.43□□□□□ -1.06
SCAF8-206ENST00000479234 ASXL2Q76L83 1435 aa8.43□□□□□ -1.06
SCAF8-206ENST00000479234 ADGRL1O94910 1474 aa8.43□□□□□ -1.06
SCAF8-206ENST00000479234 SCAF11Q99590 1463 aaKnown RBP8.43□□□□□ -1.06
SCAF8-206ENST00000479234 ATP7AQ04656 1500 aa8.43□□□□□ -1.06
SCAF8-206ENST00000479234 TET3O43151 1660 aa8.43□□□□□ -1.06
SCAF8-206ENST00000479234 RBM33Q96EV2 1170 aaKnown RBP8.42□□□□□ -1.06
SCAF8-206ENST00000479234 INO80Q9ULG1 1556 aaPredicted RBP8.42□□□□□ -1.06
SCAF8-206ENST00000479234 RNF17Q9BXT8 1623 aaKnown RBP8.41□□□□□ -1.06
SCAF8-206ENST00000479234 EIF3AQ14152 1382 aaKnown RBP8.41□□□□□ -1.06
SCAF8-206ENST00000479234 NPC1L1Q9UHC9 1359 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms