RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 NOL7Q9UMY1 257 aaKnown RBP12.85□□□□□ -0.35
NUP35-209ENST00000479162 AKNAQ7Z591 1439 aa12.85□□□□□ -0.35
NUP35-209ENST00000479162 KLHL33A6NCF5 533 aa12.84□□□□□ -0.35
NUP35-209ENST00000479162 TRAK2O60296 914 aa12.84□□□□□ -0.35
NUP35-209ENST00000479162 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
NUP35-209ENST00000479162 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
NUP35-209ENST00000479162 EHBP1L1Q8N3D4 1523 aa12.84□□□□□ -0.35
NUP35-209ENST00000479162 SMG6Q86US8 1419 aaKnown RBP12.84□□□□□ -0.35
NUP35-209ENST00000479162 KIF14Q15058 1648 aa12.84□□□□□ -0.35
NUP35-209ENST00000479162 TSPAN18Q96SJ8 248 aa12.84□□□□□ -0.35
NUP35-209ENST00000479162 KIF3CO14782 793 aa12.84□□□□□ -0.35
NUP35-209ENST00000479162 MCM4P33991 863 aa12.83□□□□□ -0.36
NUP35-209ENST00000479162 CXorf56Q9H5V9 222 aa12.83□□□□□ -0.36
NUP35-209ENST00000479162 GTF2F1P35269 517 aaKnown RBP eCLIP12.83□□□□□ -0.36
NUP35-209ENST00000479162 HMGN5P82970 282 aaKnown RBP12.83□□□□□ -0.36
NUP35-209ENST00000479162 SETDB1Q15047 1291 aa12.83□□□□□ -0.36
NUP35-209ENST00000479162 TMX1Q9H3N1 280 aa12.83□□□□□ -0.36
NUP35-209ENST00000479162 PANK3Q9H999 370 aa12.83□□□□□ -0.36
NUP35-209ENST00000479162 MCM5P33992 734 aa12.82□□□□□ -0.36
NUP35-209ENST00000479162 JMYQ8N9B5 988 aa12.82□□□□□ -0.36
NUP35-209ENST00000479162 TRERF1Q96PN7 1200 aa12.82□□□□□ -0.36
NUP35-209ENST00000479162 TIAM1Q13009 1591 aa12.82□□□□□ -0.36
NUP35-209ENST00000479162 TEX14Q8IWB6 1497 aa12.82□□□□□ -0.36
NUP35-209ENST00000479162 LIG1P18858 919 aa12.82□□□□□ -0.36
NUP35-209ENST00000479162 PRIMPOLQ96LW4 560 aa12.82□□□□□ -0.36
NUP35-209ENST00000479162 MYO5CQ9NQX4 1742 aa12.81□□□□□ -0.36
NUP35-209ENST00000479162 TOMM22Q9NS69 142 aa12.81□□□□□ -0.36
NUP35-209ENST00000479162 KNSTRNQ9Y448 316 aa12.81□□□□□ -0.36
NUP35-209ENST00000479162 PNISRQ8TF01 805 aaKnown RBP12.81□□□□□ -0.36
NUP35-209ENST00000479162 PREX2Q70Z35 1606 aa12.8□□□□□ -0.36
NUP35-209ENST00000479162 TROQ12816 1431 aaPredicted RBP12.8□□□□□ -0.36
NUP35-209ENST00000479162 ITSN2Q9NZM3 1697 aa12.8□□□□□ -0.36
NUP35-209ENST00000479162 TERF2Q15554 542 aa12.8□□□□□ -0.36
NUP35-209ENST00000479162 ARHGEF1Q92888 912 aaKnown RBP12.8□□□□□ -0.36
NUP35-209ENST00000479162 TNPO1Q92973 898 aaKnown RBP12.8□□□□□ -0.36
NUP35-209ENST00000479162 RAD50Q92878 1312 aa12.8□□□□□ -0.36
NUP35-209ENST00000479162 CTAGE5O15320 804 aa12.8□□□□□ -0.36
NUP35-209ENST00000479162 IPO7O95373 1038 aaKnown RBP12.79□□□□□ -0.36
NUP35-209ENST00000479162 RAD51AP2Q09MP3 1159 aa12.79□□□□□ -0.36
NUP35-209ENST00000479162 CCDC91Q7Z6B0 441 aa12.79□□□□□ -0.36
NUP35-209ENST00000479162 CREBRFQ8IUR6 639 aa12.79□□□□□ -0.36
NUP35-209ENST00000479162 CCDC97Q96F63 343 aaPredicted RBP12.79□□□□□ -0.36
NUP35-209ENST00000479162 U2AF2P26368 475 aaKnown RBP eCLIP12.79□□□□□ -0.362e-7■■□□□ 13.4
NUP35-209ENST00000479162 SWT1Q5T5J6 900 aaKnown RBP12.79□□□□□ -0.36
NUP35-209ENST00000479162 RPS6KL1Q9Y6S9 549 aa12.79□□□□□ -0.36
NUP35-209ENST00000479162 NEO1Q92859 1461 aa12.78□□□□□ -0.36
NUP35-209ENST00000479162 SLKQ9H2G2 1235 aaPredicted RBP12.78□□□□□ -0.36
NUP35-209ENST00000479162 COQ9O75208 318 aa12.78□□□□□ -0.36
NUP35-209ENST00000479162 C11orf91Q3C1V1 193 aa12.78□□□□□ -0.36
NUP35-209ENST00000479162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.77□□□□□ -0.36
NUP35-209ENST00000479162 NUCKS1Q9H1E3 243 aaKnown RBP12.77□□□□□ -0.36
NUP35-209ENST00000479162 GOLGA6L6A8MZA4 724 aa12.77□□□□□ -0.37
NUP35-209ENST00000479162 CCT2P78371 535 aaKnown RBP12.77□□□□□ -0.37
NUP35-209ENST00000479162 C1QTNF12Q5T7M4 302 aa12.77□□□□□ -0.37
NUP35-209ENST00000479162 ERICH4A6NGS2 130 aa12.76□□□□□ -0.37
NUP35-209ENST00000479162 H0YHG0 523 aa12.76□□□□□ -0.37
NUP35-209ENST00000479162 SCP2P22307 547 aa12.76□□□□□ -0.37
NUP35-209ENST00000479162 SARNPP82979 210 aaKnown RBP12.76□□□□□ -0.37
NUP35-209ENST00000479162 SPTY2D1Q68D10 685 aaPredicted RBP12.76□□□□□ -0.37
NUP35-209ENST00000479162 MKL1Q969V6 931 aa12.76□□□□□ -0.37
NUP35-209ENST00000479162 NUDCQ9Y266 331 aa12.76□□□□□ -0.37
NUP35-209ENST00000479162 SUPT6HQ7KZ85 1726 aaKnown RBP12.76□□□□□ -0.37
NUP35-209ENST00000479162 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
NUP35-209ENST00000479162 NASPP49321 788 aaPredicted RBP12.76□□□□□ -0.37
NUP35-209ENST00000479162 MYBPC2Q14324 1141 aa12.76□□□□□ -0.37
NUP35-209ENST00000479162 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
NUP35-209ENST00000479162 ZKSCAN5Q9Y2L8 839 aa12.76□□□□□ -0.37
NUP35-209ENST00000479162 TPM3P06753 285 aa12.75□□□□□ -0.37
NUP35-209ENST00000479162 CASQ1P31415 396 aa12.75□□□□□ -0.37
NUP35-209ENST00000479162 TRDNQ13061 729 aa12.75□□□□□ -0.37
NUP35-209ENST00000479162 PPP2R5AQ15172 486 aa12.75□□□□□ -0.37
NUP35-209ENST00000479162 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
NUP35-209ENST00000479162 MSL3Q8N5Y2 521 aaKnown RBP12.75□□□□□ -0.37
NUP35-209ENST00000479162 ANTXR1Q9H6X2 564 aa12.75□□□□□ -0.37
NUP35-209ENST00000479162 TTC37Q6PGP7 1564 aa12.75□□□□□ -0.37
NUP35-209ENST00000479162 RBM25P49756 843 aaKnown RBP12.75□□□□□ -0.37
NUP35-209ENST00000479162 RPAINQ86UA6 219 aa12.75□□□□□ -0.37
NUP35-209ENST00000479162 ANAPC4Q9UJX5 808 aa12.74□□□□□ -0.37
NUP35-209ENST00000479162 JRKLQ9Y4A0 524 aa12.74□□□□□ -0.37
NUP35-209ENST00000479162 DDX11L8A8MPP1 907 aa12.74□□□□□ -0.37
NUP35-209ENST00000479162 SRPK2P78362 688 aaKnown RBP12.74□□□□□ -0.37
NUP35-209ENST00000479162 CDC42BPAQ5VT25 1732 aa12.74□□□□□ -0.37
NUP35-209ENST00000479162 DDX49Q9Y6V7 483 aaKnown RBP12.74□□□□□ -0.37
NUP35-209ENST00000479162 RBM5P52756 815 aaKnown RBP eCLIP12.73□□□□□ -0.37
NUP35-209ENST00000479162 DDX46Q7L014 1031 aaKnown RBP12.73□□□□□ -0.37
NUP35-209ENST00000479162 KDM4CQ9H3R0 1056 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 DEF6Q9H4E7 631 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 SUDS3Q9H7L9 328 aaPredicted RBP12.73□□□□□ -0.37
NUP35-209ENST00000479162 PAXBP1Q9Y5B6 917 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 ZMYM4Q5VZL5 1548 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 GOLGA6CA6NDK9 693 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 GOLGA6BA6NDN3 693 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 GOLGA6DP0CG33 693 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 PAX7P23759 505 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 GOLGA6L1Q8N7Z2 621 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 TSC1Q92574 1164 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 DRC1Q96MC2 740 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 GOLGA6AQ9NYA3 693 aa12.73□□□□□ -0.37
NUP35-209ENST00000479162 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.73□□□□□ -0.37
NUP35-209ENST00000479162 GSCP56915 257 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms