RNA–Protein interactions for RNA: ENST00000479042.1

LSP1P2-201, Transcript of LSP1 pseudogene 2, humanhuman

BASIC

Gene LSP1P2, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P2-201ENST00000479042 CABP1Q9NZU7 370 aa16.31■□□□□ 0.2
LSP1P2-201ENST00000479042 BCL9LQ86UU0 1499 aa16.29■□□□□ 0.2
LSP1P2-201ENST00000479042 RGS12O14924 1447 aa16.29■□□□□ 0.2
LSP1P2-201ENST00000479042 PLEKHG3A1L390 1219 aa16.29■□□□□ 0.2
LSP1P2-201ENST00000479042 QTRT2Q9H974 415 aaKnown RBP16.29■□□□□ 0.2
LSP1P2-201ENST00000479042 AKAP12Q02952 1782 aa16.28■□□□□ 0.2
LSP1P2-201ENST00000479042 RXRBP28702 533 aa16.28■□□□□ 0.2
LSP1P2-201ENST00000479042 NRKQ7Z2Y5 1582 aa16.27■□□□□ 0.2
LSP1P2-201ENST00000479042 ST20-MTHFSA0A0A6YYL1 179 aa16.27■□□□□ 0.2
LSP1P2-201ENST00000479042 FNBP4Q8N3X1 1017 aaPredicted RBP16.27■□□□□ 0.2
LSP1P2-201ENST00000479042 SLIT2O94813 1529 aa16.27■□□□□ 0.2
LSP1P2-201ENST00000479042 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.27■□□□□ 0.19
LSP1P2-201ENST00000479042 PIK3C2AO00443 1686 aa16.27■□□□□ 0.19
LSP1P2-201ENST00000479042 ATRNO75882 1429 aa16.27■□□□□ 0.19
LSP1P2-201ENST00000479042 USP6P35125 1406 aa16.27■□□□□ 0.19
LSP1P2-201ENST00000479042 USP47Q96K76 1375 aa16.26■□□□□ 0.19
LSP1P2-201ENST00000479042 SBNO2Q9Y2G9 1366 aa16.26■□□□□ 0.19
LSP1P2-201ENST00000479042 CLSPNQ9HAW4 1339 aa16.26■□□□□ 0.19
LSP1P2-201ENST00000479042 NRAPQ86VF7 1730 aa16.26■□□□□ 0.19
LSP1P2-201ENST00000479042 UPF1Q92900 1129 aaKnown RBP eCLIP16.25■□□□□ 0.19
LSP1P2-201ENST00000479042 GLI3P10071 1580 aa16.25■□□□□ 0.19
LSP1P2-201ENST00000479042 MON2Q7Z3U7 1717 aa16.24■□□□□ 0.19
LSP1P2-201ENST00000479042 NWD2Q9ULI1 1742 aa16.24■□□□□ 0.19
LSP1P2-201ENST00000479042 ATAD2Q6PL18 1390 aa16.24■□□□□ 0.19
LSP1P2-201ENST00000479042 COL14A1Q05707 1796 aaKnown RBP16.23■□□□□ 0.19
LSP1P2-201ENST00000479042 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
LSP1P2-201ENST00000479042 FAM83GA6ND36 823 aa16.23■□□□□ 0.19
LSP1P2-201ENST00000479042 RBM6P78332 1123 aaKnown RBP16.23■□□□□ 0.19
LSP1P2-201ENST00000479042 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
LSP1P2-201ENST00000479042 TESK2Q96S53 571 aa16.23■□□□□ 0.19
LSP1P2-201ENST00000479042 TRPC5Q9UL62 973 aaPredicted RBP16.23■□□□□ 0.19
LSP1P2-201ENST00000479042 ZC3H6P61129 1189 aaKnown RBP16.22■□□□□ 0.19
LSP1P2-201ENST00000479042 CHRNA2Q15822 529 aa16.22■□□□□ 0.19
LSP1P2-201ENST00000479042 TMC1Q8TDI8 760 aa16.22■□□□□ 0.19
LSP1P2-201ENST00000479042 KIAA0232Q92628 1395 aa16.22■□□□□ 0.19
LSP1P2-201ENST00000479042 CD163L1Q9NR16 1453 aa16.22■□□□□ 0.19
LSP1P2-201ENST00000479042 SSH2Q76I76 1423 aa16.21■□□□□ 0.19
LSP1P2-201ENST00000479042 UNC5CLQ8IV45 518 aa16.21■□□□□ 0.19
LSP1P2-201ENST00000479042 ZBTB7CA1YPR0 619 aa16.2■□□□□ 0.18
LSP1P2-201ENST00000479042 PRDM11Q9NQV5 511 aa16.2■□□□□ 0.18
LSP1P2-201ENST00000479042 CCDC9Q9Y3X0 531 aaKnown RBP16.2■□□□□ 0.18
LSP1P2-201ENST00000479042 CPSF1Q10570 1443 aaKnown RBP16.19■□□□□ 0.18
LSP1P2-201ENST00000479042 KTN1Q86UP2 1357 aaKnown RBP16.19■□□□□ 0.18
LSP1P2-201ENST00000479042 SLC12A5Q9H2X9 1139 aa16.19■□□□□ 0.18
LSP1P2-201ENST00000479042 BTG4Q9NY30 223 aa16.19■□□□□ 0.18
LSP1P2-201ENST00000479042 USP19O94966 1318 aa16.19■□□□□ 0.18
LSP1P2-201ENST00000479042 SOX12O15370 315 aa16.18■□□□□ 0.18
LSP1P2-201ENST00000479042 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
LSP1P2-201ENST00000479042 TTC21BQ7Z4L5 1316 aa16.18■□□□□ 0.18
LSP1P2-201ENST00000479042 NLRP6P59044 892 aa16.17■□□□□ 0.18
LSP1P2-201ENST00000479042 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
LSP1P2-201ENST00000479042 GJD4Q96KN9 370 aaPredicted RBP16.17■□□□□ 0.18
LSP1P2-201ENST00000479042 SLIT3O75094 1523 aa16.17■□□□□ 0.18
LSP1P2-201ENST00000479042 A0A1W2PP64 1363 aa16.16■□□□□ 0.18
LSP1P2-201ENST00000479042 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
LSP1P2-201ENST00000479042 LMO7Q8WWI1 1683 aa16.15■□□□□ 0.18
LSP1P2-201ENST00000479042 BRWD3Q6RI45 1802 aa16.15■□□□□ 0.18
LSP1P2-201ENST00000479042 NLRP13Q86W25 1043 aa16.15■□□□□ 0.18
LSP1P2-201ENST00000479042 STRN4Q9NRL3 753 aa16.15■□□□□ 0.18
LSP1P2-201ENST00000479042 MYOM1P52179 1685 aa16.14■□□□□ 0.18
LSP1P2-201ENST00000479042 VPS72Q15906 364 aa16.14■□□□□ 0.17
LSP1P2-201ENST00000479042 NME9Q86XW9 330 aa16.14■□□□□ 0.17
LSP1P2-201ENST00000479042 CAMTA1Q9Y6Y1 1673 aa16.14■□□□□ 0.17
LSP1P2-201ENST00000479042 GCP02774 474 aa16.13■□□□□ 0.17
LSP1P2-201ENST00000479042 BRD4O60885 1362 aaPredicted RBP16.13■□□□□ 0.17
LSP1P2-201ENST00000479042 TMF1P82094 1093 aa16.12■□□□□ 0.17
LSP1P2-201ENST00000479042 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
LSP1P2-201ENST00000479042 A0A0G2JS52 829 aa16.11■□□□□ 0.17
LSP1P2-201ENST00000479042 MYT1Q01538 1121 aa16.11■□□□□ 0.17
LSP1P2-201ENST00000479042 HDGFL2Q7Z4V5 671 aaPredicted RBP16.11■□□□□ 0.17
LSP1P2-201ENST00000479042 RGPD5Q99666 1765 aa16.1■□□□□ 0.17
LSP1P2-201ENST00000479042 NFAT5O94916 1531 aa16.1■□□□□ 0.17
LSP1P2-201ENST00000479042 FAM98CQ17RN3 349 aaKnown RBP16.1■□□□□ 0.17
LSP1P2-201ENST00000479042 POLR3GLQ9BT43 218 aa16.1■□□□□ 0.17
LSP1P2-201ENST00000479042 TTC21AQ8NDW8 1320 aa16.1■□□□□ 0.17
LSP1P2-201ENST00000479042 CPDO75976 1380 aa16.1■□□□□ 0.17
LSP1P2-201ENST00000479042 EDC4Q6P2E9 1401 aaKnown RBP16.1■□□□□ 0.17
LSP1P2-201ENST00000479042 USP54Q70EL1 1684 aa16.09■□□□□ 0.17
LSP1P2-201ENST00000479042 COL18A1P39060 1754 aa16.09■□□□□ 0.17
LSP1P2-201ENST00000479042 SEPT12Q8IYM1 358 aa16.09■□□□□ 0.17
LSP1P2-201ENST00000479042 USP35Q9P2H5 1018 aa16.09■□□□□ 0.17
LSP1P2-201ENST00000479042 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
LSP1P2-201ENST00000479042 TERF2IPQ9NYB0 399 aa16.08■□□□□ 0.16
LSP1P2-201ENST00000479042 COL5A2P05997 1499 aaPredicted RBP16.08■□□□□ 0.16
LSP1P2-201ENST00000479042 LTN1O94822 1766 aa16.08■□□□□ 0.16
LSP1P2-201ENST00000479042 LARP1Q6PKG0 1096 aaKnown RBP16.07■□□□□ 0.16
LSP1P2-201ENST00000479042 SPATA31A5Q5VU36 1347 aa16.07■□□□□ 0.16
LSP1P2-201ENST00000479042 SPATA31A7Q8IWB4 1347 aa16.07■□□□□ 0.16
LSP1P2-201ENST00000479042 THSD7AQ9UPZ6 1657 aa16.07■□□□□ 0.16
LSP1P2-201ENST00000479042 OVOS2A0A0J9YW53 1432 aa16.06■□□□□ 0.16
LSP1P2-201ENST00000479042 OVOS2Q6IE36 1432 aa16.06■□□□□ 0.16
LSP1P2-201ENST00000479042 ANKRD36BQ8N2N9 1353 aa16.06■□□□□ 0.16
LSP1P2-201ENST00000479042 NINLQ9Y2I6 1382 aa16.05■□□□□ 0.16
LSP1P2-201ENST00000479042 EVA1CP58658 441 aa16.05■□□□□ 0.16
LSP1P2-201ENST00000479042 PUS7Q96PZ0 661 aaKnown RBP16.05■□□□□ 0.16
LSP1P2-201ENST00000479042 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
LSP1P2-201ENST00000479042 EP400Q96L91 3159 aa16.05■□□□□ 0.16
LSP1P2-201ENST00000479042 USP31Q70CQ4 1352 aa16.04■□□□□ 0.16
LSP1P2-201ENST00000479042 SPATA31A1Q5TZJ5 1347 aa16.04■□□□□ 0.16
LSP1P2-201ENST00000479042 EIF4G2P78344 907 aaKnown RBP eCLIP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms