RNA–Protein interactions for RNA: ENST00000478687.5

VRK2-209, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,021 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-209ENST00000478687 STRCQ7RTU9 1775 aa9.05□□□□□ -0.96
VRK2-209ENST00000478687 E2F4Q16254 413 aa9.05□□□□□ -0.96
VRK2-209ENST00000478687 ZNF697Q5TEC3 545 aa9.05□□□□□ -0.96
VRK2-209ENST00000478687 AAASQ9NRG9 546 aa9.05□□□□□ -0.96
VRK2-209ENST00000478687 SOCS7O14512 581 aa9.04□□□□□ -0.96
VRK2-209ENST00000478687 EFCAB2Q5VUJ9 269 aa9.04□□□□□ -0.96
VRK2-209ENST00000478687 UHRF1BP1Q6BDS2 1440 aa9.04□□□□□ -0.96
VRK2-209ENST00000478687 MYO5CQ9NQX4 1742 aa9.03□□□□□ -0.96
VRK2-209ENST00000478687 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
VRK2-209ENST00000478687 PPEF1O14829 653 aaPredicted RBP9.03□□□□□ -0.96
VRK2-209ENST00000478687 AFAP1Q8N556 730 aa9.03□□□□□ -0.96
VRK2-209ENST00000478687 EEA1Q15075 1411 aa9.03□□□□□ -0.96
VRK2-209ENST00000478687 ZNF518AQ6AHZ1 1483 aa9.02□□□□□ -0.96
VRK2-209ENST00000478687 KIF14Q15058 1648 aa9.02□□□□□ -0.96
VRK2-209ENST00000478687 ST8SIA5O15466 376 aa9.02□□□□□ -0.97
VRK2-209ENST00000478687 S1PR4O95977 384 aa9.02□□□□□ -0.97
VRK2-209ENST00000478687 PLA2G2CQ5R387 149 aa9.02□□□□□ -0.97
VRK2-209ENST00000478687 CRIPAKQ8N1N5 446 aa9.02□□□□□ -0.97
VRK2-209ENST00000478687 ARHGAP5Q13017 1502 aa9.01□□□□□ -0.97
VRK2-209ENST00000478687 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
VRK2-209ENST00000478687 SPATA31D1Q6ZQQ2 1576 aa9.01□□□□□ -0.97
VRK2-209ENST00000478687 KDM5CP41229 1560 aa9□□□□□ -0.97
VRK2-209ENST00000478687 DIP2CQ9Y2E4 1556 aa9□□□□□ -0.97
VRK2-209ENST00000478687 ACTN4O43707 911 aaKnown RBP9□□□□□ -0.97
VRK2-209ENST00000478687 ABCA6Q8N139 1617 aa8.99□□□□□ -0.97
VRK2-209ENST00000478687 PKD2L1Q9P0L9 805 aa8.99□□□□□ -0.97
VRK2-209ENST00000478687 CDK11AQ9UQ88 783 aaPredicted RBP8.99□□□□□ -0.97
VRK2-209ENST00000478687 C3P01024 1663 aa8.99□□□□□ -0.97
VRK2-209ENST00000478687 PTPRTO14522 1441 aa8.98□□□□□ -0.97
VRK2-209ENST00000478687 FMN1Q68DA7 1419 aa8.98□□□□□ -0.97
VRK2-209ENST00000478687 ADH1BP00325 375 aa8.98□□□□□ -0.97
VRK2-209ENST00000478687 UBTFP17480 764 aaKnown RBP8.98□□□□□ -0.97
VRK2-209ENST00000478687 ESF1Q9H501 851 aaKnown RBP8.98□□□□□ -0.97
VRK2-209ENST00000478687 TMEM134Q9H6X4 195 aa8.98□□□□□ -0.97
VRK2-209ENST00000478687 LTBP4Q8N2S1 1624 aa8.98□□□□□ -0.97
VRK2-209ENST00000478687 TROQ12816 1431 aaPredicted RBP8.97□□□□□ -0.97
VRK2-209ENST00000478687 ARHGAP35Q9NRY4 1499 aa8.97□□□□□ -0.97
VRK2-209ENST00000478687 AVPP01185 164 aa8.97□□□□□ -0.97
VRK2-209ENST00000478687 SLC4A3P48751 1232 aa8.97□□□□□ -0.97
VRK2-209ENST00000478687 REREQ9P2R6 1566 aa8.97□□□□□ -0.97
VRK2-209ENST00000478687 CLIP1P30622 1438 aa8.97□□□□□ -0.97
VRK2-209ENST00000478687 TRAPPC8Q9Y2L5 1435 aa8.97□□□□□ -0.97
VRK2-209ENST00000478687 MLH3Q9UHC1 1453 aa8.96□□□□□ -0.97
VRK2-209ENST00000478687 SETD1BQ9UPS6 1966 aaKnown RBP8.96□□□□□ -0.98
VRK2-209ENST00000478687 DNAJB2P25686 324 aa8.96□□□□□ -0.98
VRK2-209ENST00000478687 LMOD2Q6P5Q4 547 aa8.96□□□□□ -0.98
VRK2-209ENST00000478687 CDC42BPBQ9Y5S2 1711 aa8.96□□□□□ -0.98
VRK2-209ENST00000478687 LRRIQ1Q96JM4 1722 aa8.95□□□□□ -0.98
VRK2-209ENST00000478687 DACH1Q9UI36 760 aa8.95□□□□□ -0.98
VRK2-209ENST00000478687 NCOA1Q15788 1441 aa8.95□□□□□ -0.98
VRK2-209ENST00000478687 ABCC1P33527 1531 aa8.95□□□□□ -0.98
VRK2-209ENST00000478687 AGLP35573 1532 aa8.95□□□□□ -0.98
VRK2-209ENST00000478687 WIPF1O43516 503 aa8.94□□□□□ -0.98
VRK2-209ENST00000478687 NFX1Q12986 1120 aaKnown RBP8.94□□□□□ -0.98
VRK2-209ENST00000478687 CAMSAP1Q5T5Y3 1602 aa8.94□□□□□ -0.98
VRK2-209ENST00000478687 BBXQ8WY36 941 aaPredicted RBP8.93□□□□□ -0.98
VRK2-209ENST00000478687 TOR4AQ9NXH8 423 aa8.93□□□□□ -0.98
VRK2-209ENST00000478687 PREX2Q70Z35 1606 aa8.93□□□□□ -0.98
VRK2-209ENST00000478687 ITSN2Q9NZM3 1697 aa8.93□□□□□ -0.98
VRK2-209ENST00000478687 KIDINS220Q9ULH0 1771 aa8.92□□□□□ -0.98
VRK2-209ENST00000478687 IQSEC2Q5JU85 1478 aa8.92□□□□□ -0.98
VRK2-209ENST00000478687 CNTLNQ9NXG0 1405 aa8.92□□□□□ -0.98
VRK2-209ENST00000478687 ZNF335Q9H4Z2 1342 aaPredicted RBP8.92□□□□□ -0.98
VRK2-209ENST00000478687 WFS1O76024 890 aa8.92□□□□□ -0.98
VRK2-209ENST00000478687 SLC10A3P09131 477 aa8.92□□□□□ -0.98
VRK2-209ENST00000478687 KMT5BQ4FZB7 885 aa8.92□□□□□ -0.98
VRK2-209ENST00000478687 LCE2CQ5TA81 110 aa8.92□□□□□ -0.98
VRK2-209ENST00000478687 ADGRG1Q9Y653 693 aa8.92□□□□□ -0.98
VRK2-209ENST00000478687 UBAP1LF5GYI3 381 aa8.91□□□□□ -0.98
VRK2-209ENST00000478687 CFHP08603 1231 aa8.91□□□□□ -0.98
VRK2-209ENST00000478687 SLC6A16Q9GZN6 736 aa8.91□□□□□ -0.98
VRK2-209ENST00000478687 ZNF777Q9ULD5 760 aaPredicted RBP8.91□□□□□ -0.98
VRK2-209ENST00000478687 ZMYM3Q14202 1370 aa8.9□□□□□ -0.98
VRK2-209ENST00000478687 PTGDRQ13258 359 aa8.9□□□□□ -0.98
VRK2-209ENST00000478687 STK17AQ9UEE5 414 aa8.9□□□□□ -0.98
VRK2-209ENST00000478687 NPATQ14207 1427 aa8.89□□□□□ -0.99
VRK2-209ENST00000478687 SMCPP49901 116 aaPredicted RBP8.89□□□□□ -0.99
VRK2-209ENST00000478687 GMPR2Q9P2T1 348 aaKnown RBP8.89□□□□□ -0.99
VRK2-209ENST00000478687 SAMD9LQ8IVG5 1584 aa8.89□□□□□ -0.99
VRK2-209ENST00000478687 CDC42BPAQ5VT25 1732 aa8.88□□□□□ -0.99
VRK2-209ENST00000478687 SUPT6HQ7KZ85 1726 aaKnown RBP8.88□□□□□ -0.99
VRK2-209ENST00000478687 MROH2AA6NES4 1674 aa8.88□□□□□ -0.99
VRK2-209ENST00000478687 MYO3AQ8NEV4 1616 aa8.88□□□□□ -0.99
VRK2-209ENST00000478687 RCCD1A6NED2 376 aa8.88□□□□□ -0.99
VRK2-209ENST00000478687 NR1I2O75469 434 aa8.88□□□□□ -0.99
VRK2-209ENST00000478687 HNRNPMP52272 730 aaKnown RBP eCLIP8.88□□□□□ -0.99
VRK2-209ENST00000478687 SYCP2Q9BX26 1530 aa8.88□□□□□ -0.99
VRK2-209ENST00000478687 CCDC18Q5T9S5 1454 aa8.88□□□□□ -0.99
VRK2-209ENST00000478687 CLTCQ00610 1675 aaKnown RBP8.88□□□□□ -0.99
VRK2-209ENST00000478687 SPAG9O60271 1321 aaKnown RBP8.87□□□□□ -0.99
VRK2-209ENST00000478687 CTC1Q2NKJ3 1217 aa8.87□□□□□ -0.99
VRK2-209ENST00000478687 SCUBE3Q8IX30 993 aa8.87□□□□□ -0.99
VRK2-209ENST00000478687 RBM46Q8TBY0 533 aaKnown RBP8.87□□□□□ -0.99
VRK2-209ENST00000478687 CASKIN1Q8WXD9 1431 aa8.87□□□□□ -0.99
VRK2-209ENST00000478687 RPIAP49247 311 aa8.86□□□□□ -0.99
VRK2-209ENST00000478687 GGT6Q6P531 493 aa8.86□□□□□ -0.99
VRK2-209ENST00000478687 CEP170BQ9Y4F5 1589 aaPredicted RBP8.86□□□□□ -0.99
VRK2-209ENST00000478687 ATP7AQ04656 1500 aa8.85□□□□□ -0.99
VRK2-209ENST00000478687 ZNF142P52746 1687 aaPredicted RBP8.85□□□□□ -0.99
VRK2-209ENST00000478687 PLA2R1Q13018 1463 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms