RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 NRAPQ86VF7 1730 aa26.88■■□□□ 1.89
SREBF1-212ENST00000478616 NWD2Q9ULI1 1742 aa26.88■■□□□ 1.89
SREBF1-212ENST00000478616 GLI3P10071 1580 aa26.87■■□□□ 1.89
SREBF1-212ENST00000478616 PLEKHG5O94827 1062 aa26.86■■□□□ 1.89
SREBF1-212ENST00000478616 LMOD2Q6P5Q4 547 aa26.86■■□□□ 1.89
SREBF1-212ENST00000478616 PCGF6Q9BYE7 350 aa26.86■■□□□ 1.89
SREBF1-212ENST00000478616 AKAP12Q02952 1782 aa26.85■■□□□ 1.89
SREBF1-212ENST00000478616 RBM6P78332 1123 aaKnown RBP26.85■■□□□ 1.89
SREBF1-212ENST00000478616 SRPK2P78362 688 aaKnown RBP26.85■■□□□ 1.89
SREBF1-212ENST00000478616 SBNO2Q9Y2G9 1366 aa26.84■■□□□ 1.89
SREBF1-212ENST00000478616 SSH2Q76I76 1423 aa26.82■■□□□ 1.88
SREBF1-212ENST00000478616 CARD11Q9BXL7 1154 aa26.82■■□□□ 1.88
SREBF1-212ENST00000478616 TRPC5Q9UL62 973 aaPredicted RBP26.82■■□□□ 1.88
SREBF1-212ENST00000478616 FAM83GA6ND36 823 aa26.81■■□□□ 1.88
SREBF1-212ENST00000478616 COL14A1Q05707 1796 aaKnown RBP26.8■■□□□ 1.88
SREBF1-212ENST00000478616 CABP1Q9NZU7 370 aa26.8■■□□□ 1.88
SREBF1-212ENST00000478616 NRKQ7Z2Y5 1582 aa26.8■■□□□ 1.88
SREBF1-212ENST00000478616 EVC2Q86UK5 1308 aa26.79■■□□□ 1.88
SREBF1-212ENST00000478616 PAK3O75914 559 aaPredicted RBP26.78■■□□□ 1.88
SREBF1-212ENST00000478616 UNC5CLQ8IV45 518 aa26.78■■□□□ 1.88
SREBF1-212ENST00000478616 USP6P35125 1406 aa26.78■■□□□ 1.88
SREBF1-212ENST00000478616 PIK3C2AO00443 1686 aa26.78■■□□□ 1.88
SREBF1-212ENST00000478616 NUTM2GQ5VZR2 741 aa26.76■■□□□ 1.87
SREBF1-212ENST00000478616 BRWD3Q6RI45 1802 aa26.76■■□□□ 1.87
SREBF1-212ENST00000478616 MON2Q7Z3U7 1717 aa26.75■■□□□ 1.87
SREBF1-212ENST00000478616 GJD4Q96KN9 370 aaPredicted RBP26.74■■□□□ 1.87
SREBF1-212ENST00000478616 CD163L1Q9NR16 1453 aa26.74■■□□□ 1.87
SREBF1-212ENST00000478616 CPSF1Q10570 1443 aaKnown RBP26.73■■□□□ 1.87
SREBF1-212ENST00000478616 USP19O94966 1318 aa26.73■■□□□ 1.87
SREBF1-212ENST00000478616 TESK2Q96S53 571 aa26.73■■□□□ 1.87
SREBF1-212ENST00000478616 HAP1P54257 671 aaPredicted RBP26.72■■□□□ 1.87
SREBF1-212ENST00000478616 UPF1Q92900 1129 aaKnown RBP eCLIP26.72■■□□□ 1.87
SREBF1-212ENST00000478616 CLSPNQ9HAW4 1339 aa26.7■■□□□ 1.87
SREBF1-212ENST00000478616 LMO7Q8WWI1 1683 aa26.7■■□□□ 1.87
SREBF1-212ENST00000478616 KIAA0232Q92628 1395 aa26.7■■□□□ 1.86
SREBF1-212ENST00000478616 VPS72Q15906 364 aa26.69■■□□□ 1.86
SREBF1-212ENST00000478616 SLIT3O75094 1523 aa26.69■■□□□ 1.86
SREBF1-212ENST00000478616 BRD4O60885 1362 aaPredicted RBP26.69■■□□□ 1.86
SREBF1-212ENST00000478616 ABTB2Q8N961 1025 aa26.67■■□□□ 1.86
SREBF1-212ENST00000478616 ATAD2Q6PL18 1390 aa26.67■■□□□ 1.86
SREBF1-212ENST00000478616 ST20-MTHFSA0A0A6YYL1 179 aa26.66■■□□□ 1.86
SREBF1-212ENST00000478616 BTG4Q9NY30 223 aa26.66■■□□□ 1.86
SREBF1-212ENST00000478616 COL18A1P39060 1754 aa26.64■■□□□ 1.86
SREBF1-212ENST00000478616 CAMTA1Q9Y6Y1 1673 aa26.64■■□□□ 1.86
SREBF1-212ENST00000478616 CHRNA2Q15822 529 aa26.64■■□□□ 1.86
SREBF1-212ENST00000478616 EP400Q96L91 3159 aa26.64■■□□□ 1.85
SREBF1-212ENST00000478616 ZC3H6P61129 1189 aaKnown RBP26.63■■□□□ 1.85
SREBF1-212ENST00000478616 USP54Q70EL1 1684 aa26.63■■□□□ 1.85
SREBF1-212ENST00000478616 TTC21BQ7Z4L5 1316 aa26.63■■□□□ 1.85
SREBF1-212ENST00000478616 CPDO75976 1380 aa26.62■■□□□ 1.85
SREBF1-212ENST00000478616 ONECUT3O60422 494 aaPredicted RBP26.62■■□□□ 1.85
SREBF1-212ENST00000478616 PRDM11Q9NQV5 511 aa26.61■■□□□ 1.85
SREBF1-212ENST00000478616 USP47Q96K76 1375 aa26.6■■□□□ 1.85
SREBF1-212ENST00000478616 TIMELESSQ9UNS1 1208 aa26.6■■□□□ 1.85
SREBF1-212ENST00000478616 THSD7AQ9UPZ6 1657 aa26.6■■□□□ 1.85
SREBF1-212ENST00000478616 SLC12A5Q9H2X9 1139 aa26.59■■□□□ 1.85
SREBF1-212ENST00000478616 GCP02774 474 aa26.58■■□□□ 1.85
SREBF1-212ENST00000478616 NLRP13Q86W25 1043 aa26.57■■□□□ 1.84
SREBF1-212ENST00000478616 ZNF692Q9BU19 519 aaPredicted RBP26.57■■□□□ 1.84
SREBF1-212ENST00000478616 SPATA31A5Q5VU36 1347 aa26.57■■□□□ 1.84
SREBF1-212ENST00000478616 SPATA31A7Q8IWB4 1347 aa26.57■■□□□ 1.84
SREBF1-212ENST00000478616 KTN1Q86UP2 1357 aaKnown RBP26.57■■□□□ 1.84
SREBF1-212ENST00000478616 RGPD5Q99666 1765 aa26.56■■□□□ 1.84
SREBF1-212ENST00000478616 NFAT5O94916 1531 aa26.56■■□□□ 1.84
SREBF1-212ENST00000478616 PUS7Q96PZ0 661 aaKnown RBP26.56■■□□□ 1.84
SREBF1-212ENST00000478616 ZRANB1Q9UGI0 708 aa26.56■■□□□ 1.84
SREBF1-212ENST00000478616 NLRP6P59044 892 aa26.55■■□□□ 1.84
SREBF1-212ENST00000478616 A0A1W2PP64 1363 aa26.55■■□□□ 1.84
SREBF1-212ENST00000478616 SEPT12Q8IYM1 358 aa26.54■■□□□ 1.84
SREBF1-212ENST00000478616 TTC21AQ8NDW8 1320 aa26.52■■□□□ 1.84
SREBF1-212ENST00000478616 COL5A2P05997 1499 aaPredicted RBP26.51■■□□□ 1.83
SREBF1-212ENST00000478616 MYOM1P52179 1685 aa26.5■■□□□ 1.83
SREBF1-212ENST00000478616 USP31Q70CQ4 1352 aa26.5■■□□□ 1.83
SREBF1-212ENST00000478616 SPATA31A1Q5TZJ5 1347 aa26.5■■□□□ 1.83
SREBF1-212ENST00000478616 FAM98CQ17RN3 349 aaKnown RBP26.5■■□□□ 1.83
SREBF1-212ENST00000478616 CCDC9Q9Y3X0 531 aaKnown RBP26.5■■□□□ 1.83
SREBF1-212ENST00000478616 TMC1Q8TDI8 760 aa26.49■■□□□ 1.83
SREBF1-212ENST00000478616 NME9Q86XW9 330 aa26.48■■□□□ 1.83
SREBF1-212ENST00000478616 CCER1Q8TC90 406 aaPredicted RBP26.48■■□□□ 1.83
SREBF1-212ENST00000478616 STRN4Q9NRL3 753 aa26.47■■□□□ 1.83
SREBF1-212ENST00000478616 EDC4Q6P2E9 1401 aaKnown RBP26.47■■□□□ 1.83
SREBF1-212ENST00000478616 AATKQ6ZMQ8 1374 aa26.46■■□□□ 1.83
SREBF1-212ENST00000478616 LARP1Q6PKG0 1096 aaKnown RBP26.46■■□□□ 1.83
SREBF1-212ENST00000478616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.46■■□□□ 1.83
SREBF1-212ENST00000478616 AXIN2Q9Y2T1 843 aa26.46■■□□□ 1.83
SREBF1-212ENST00000478616 ARHGEF25Q86VW2 580 aa26.45■■□□□ 1.82
SREBF1-212ENST00000478616 LTN1O94822 1766 aa26.45■■□□□ 1.82
SREBF1-212ENST00000478616 OVOS2A0A0J9YW53 1432 aa26.44■■□□□ 1.82
SREBF1-212ENST00000478616 OVOS2Q6IE36 1432 aa26.44■■□□□ 1.82
SREBF1-212ENST00000478616 WNK3Q9BYP7 1800 aa26.43■■□□□ 1.82
SREBF1-212ENST00000478616 NINLQ9Y2I6 1382 aa26.42■■□□□ 1.82
SREBF1-212ENST00000478616 KRT27Q7Z3Y8 459 aa26.4■■□□□ 1.82
SREBF1-212ENST00000478616 HDGFL2Q7Z4V5 671 aaPredicted RBP26.39■■□□□ 1.82
SREBF1-212ENST00000478616 PARP4Q9UKK3 1724 aaKnown RBP26.39■■□□□ 1.81
SREBF1-212ENST00000478616 ANKRD36BQ8N2N9 1353 aa26.38■■□□□ 1.81
SREBF1-212ENST00000478616 SOX12O15370 315 aa26.38■■□□□ 1.81
SREBF1-212ENST00000478616 TMF1P82094 1093 aa26.38■■□□□ 1.81
SREBF1-212ENST00000478616 TERF2IPQ9NYB0 399 aa26.38■■□□□ 1.81
SREBF1-212ENST00000478616 ABCC6O95255 1503 aa26.37■■□□□ 1.81
SREBF1-212ENST00000478616 ZBTB7CA1YPR0 619 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms