RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 TONSLQ96HA7 1378 aa27.28■■□□□ 1.96
EPHB4-205ENST00000478459 UNC5CLQ8IV45 518 aa27.28■■□□□ 1.96
EPHB4-205ENST00000478459 CCDC61Q9Y6R9 512 aa27.28■■□□□ 1.96
EPHB4-205ENST00000478459 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.27■■□□□ 1.96
EPHB4-205ENST00000478459 FAM83GA6ND36 823 aa27.27■■□□□ 1.96
EPHB4-205ENST00000478459 CCDC9Q9Y3X0 531 aaKnown RBP27.27■■□□□ 1.96
EPHB4-205ENST00000478459 PPIP5K1Q6PFW1 1433 aa27.26■■□□□ 1.95
EPHB4-205ENST00000478459 GJD4Q96KN9 370 aaPredicted RBP27.26■■□□□ 1.95
EPHB4-205ENST00000478459 CRYBG1Q9Y4K1 1723 aa27.26■■□□□ 1.95
EPHB4-205ENST00000478459 GLI3P10071 1580 aa27.25■■□□□ 1.95
EPHB4-205ENST00000478459 RALGAPBQ86X10 1494 aa27.23■■□□□ 1.95
EPHB4-205ENST00000478459 NWD2Q9ULI1 1742 aa27.21■■□□□ 1.95
EPHB4-205ENST00000478459 CABP1Q9NZU7 370 aa27.21■■□□□ 1.95
EPHB4-205ENST00000478459 POLR3AO14802 1390 aaPredicted RBP27.21■■□□□ 1.95
EPHB4-205ENST00000478459 PHRF1Q9P1Y6 1649 aaKnown RBP27.2■■□□□ 1.95
EPHB4-205ENST00000478459 PLEKHG3A1L390 1219 aa27.2■■□□□ 1.94
EPHB4-205ENST00000478459 BTG4Q9NY30 223 aa27.2■■□□□ 1.94
EPHB4-205ENST00000478459 CHRNA2Q15822 529 aa27.19■■□□□ 1.94
EPHB4-205ENST00000478459 CARD11Q9BXL7 1154 aa27.19■■□□□ 1.94
EPHB4-205ENST00000478459 BRWD3Q6RI45 1802 aa27.18■■□□□ 1.94
EPHB4-205ENST00000478459 ZC3H6P61129 1189 aaKnown RBP27.18■■□□□ 1.94
EPHB4-205ENST00000478459 NRAPQ86VF7 1730 aa27.18■■□□□ 1.94
EPHB4-205ENST00000478459 EVC2Q86UK5 1308 aa27.17■■□□□ 1.94
EPHB4-205ENST00000478459 COL14A1Q05707 1796 aaKnown RBP27.17■■□□□ 1.94
EPHB4-205ENST00000478459 ABTB2Q8N961 1025 aa27.17■■□□□ 1.94
EPHB4-205ENST00000478459 PRDM11Q9NQV5 511 aa27.16■■□□□ 1.94
EPHB4-205ENST00000478459 EP400Q96L91 3159 aa27.15■■□□□ 1.94
EPHB4-205ENST00000478459 PCGF6Q9BYE7 350 aa27.15■■□□□ 1.94
EPHB4-205ENST00000478459 KIAA0232Q92628 1395 aa27.14■■□□□ 1.94
EPHB4-205ENST00000478459 A0A0G2JS52 829 aa27.14■■□□□ 1.94
EPHB4-205ENST00000478459 MYT1Q01538 1121 aa27.14■■□□□ 1.94
EPHB4-205ENST00000478459 VPS72Q15906 364 aa27.14■■□□□ 1.94
EPHB4-205ENST00000478459 ATAD2Q6PL18 1390 aa27.13■■□□□ 1.93
EPHB4-205ENST00000478459 ZBTB7CA1YPR0 619 aa27.12■■□□□ 1.93
EPHB4-205ENST00000478459 SEPT12Q8IYM1 358 aa27.1■■□□□ 1.93
EPHB4-205ENST00000478459 STRN4Q9NRL3 753 aa27.1■■□□□ 1.93
EPHB4-205ENST00000478459 NRKQ7Z2Y5 1582 aa27.09■■□□□ 1.93
EPHB4-205ENST00000478459 FAM98CQ17RN3 349 aaKnown RBP27.08■■□□□ 1.93
EPHB4-205ENST00000478459 USP6P35125 1406 aa27.07■■□□□ 1.92
EPHB4-205ENST00000478459 AKAP12Q02952 1782 aa27.05■■□□□ 1.92
EPHB4-205ENST00000478459 NLRP6P59044 892 aa27.04■■□□□ 1.92
EPHB4-205ENST00000478459 PIK3C2AO00443 1686 aa27.03■■□□□ 1.92
EPHB4-205ENST00000478459 SOX12O15370 315 aa27.03■■□□□ 1.92
EPHB4-205ENST00000478459 NLRP13Q86W25 1043 aa27.03■■□□□ 1.92
EPHB4-205ENST00000478459 USP35Q9P2H5 1018 aa27.02■■□□□ 1.92
EPHB4-205ENST00000478459 TMC1Q8TDI8 760 aa27.01■■□□□ 1.91
EPHB4-205ENST00000478459 USP19O94966 1318 aa27■■□□□ 1.91
EPHB4-205ENST00000478459 GCP02774 474 aa27■■□□□ 1.91
EPHB4-205ENST00000478459 FAM182BQ5T319 152 aa27■■□□□ 1.91
EPHB4-205ENST00000478459 EVA1CP58658 441 aa26.99■■□□□ 1.91
EPHB4-205ENST00000478459 SPATA31A5Q5VU36 1347 aa26.98■■□□□ 1.91
EPHB4-205ENST00000478459 SPATA31A7Q8IWB4 1347 aa26.98■■□□□ 1.91
EPHB4-205ENST00000478459 CAMTA1Q9Y6Y1 1673 aa26.98■■□□□ 1.91
EPHB4-205ENST00000478459 KRT27Q7Z3Y8 459 aa26.97■■□□□ 1.91
EPHB4-205ENST00000478459 KTN1Q86UP2 1357 aaKnown RBP26.97■■□□□ 1.91
EPHB4-205ENST00000478459 TTC21BQ7Z4L5 1316 aa26.96■■□□□ 1.91
EPHB4-205ENST00000478459 ST20-MTHFSA0A0A6YYL1 179 aa26.96■■□□□ 1.91
EPHB4-205ENST00000478459 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.96■■□□□ 1.91
EPHB4-205ENST00000478459 ONECUT3O60422 494 aaPredicted RBP26.95■■□□□ 1.9
EPHB4-205ENST00000478459 ZRANB1Q9UGI0 708 aa26.95■■□□□ 1.9
EPHB4-205ENST00000478459 SSH2Q76I76 1423 aa26.95■■□□□ 1.9
EPHB4-205ENST00000478459 MON2Q7Z3U7 1717 aa26.94■■□□□ 1.9
EPHB4-205ENST00000478459 LARP1Q6PKG0 1096 aaKnown RBP26.94■■□□□ 1.9
EPHB4-205ENST00000478459 SLC12A5Q9H2X9 1139 aa26.94■■□□□ 1.9
EPHB4-205ENST00000478459 LMO7Q8WWI1 1683 aa26.94■■□□□ 1.9
EPHB4-205ENST00000478459 SBNO2Q9Y2G9 1366 aa26.94■■□□□ 1.9
EPHB4-205ENST00000478459 SPATA31A1Q5TZJ5 1347 aa26.92■■□□□ 1.9
EPHB4-205ENST00000478459 ZNF692Q9BU19 519 aaPredicted RBP26.92■■□□□ 1.9
EPHB4-205ENST00000478459 CPSF1Q10570 1443 aaKnown RBP26.91■■□□□ 1.9
EPHB4-205ENST00000478459 BRD4O60885 1362 aaPredicted RBP26.91■■□□□ 1.9
EPHB4-205ENST00000478459 SLIT3O75094 1523 aa26.9■■□□□ 1.9
EPHB4-205ENST00000478459 RGPD5Q99666 1765 aa26.9■■□□□ 1.9
EPHB4-205ENST00000478459 CPDO75976 1380 aa26.9■■□□□ 1.9
EPHB4-205ENST00000478459 THSD7AQ9UPZ6 1657 aa26.89■■□□□ 1.9
EPHB4-205ENST00000478459 CD163L1Q9NR16 1453 aa26.89■■□□□ 1.9
EPHB4-205ENST00000478459 DEFB132Q7Z7B7 95 aa26.89■■□□□ 1.9
EPHB4-205ENST00000478459 TESK2Q96S53 571 aa26.88■■□□□ 1.89
EPHB4-205ENST00000478459 NME9Q86XW9 330 aa26.87■■□□□ 1.89
EPHB4-205ENST00000478459 BLMP54132 1417 aaPredicted RBP26.85■■□□□ 1.89
EPHB4-205ENST00000478459 COL5A2P05997 1499 aaPredicted RBP26.85■■□□□ 1.89
EPHB4-205ENST00000478459 TTC21AQ8NDW8 1320 aa26.85■■□□□ 1.89
EPHB4-205ENST00000478459 USP47Q96K76 1375 aa26.84■■□□□ 1.89
EPHB4-205ENST00000478459 COL18A1P39060 1754 aa26.84■■□□□ 1.89
EPHB4-205ENST00000478459 HDGFL2Q7Z4V5 671 aaPredicted RBP26.84■■□□□ 1.89
EPHB4-205ENST00000478459 SF3B2Q13435 895 aaKnown RBP26.83■■□□□ 1.89
EPHB4-205ENST00000478459 AXIN2Q9Y2T1 843 aa26.83■■□□□ 1.89
EPHB4-205ENST00000478459 A0A1W2PP64 1363 aa26.83■■□□□ 1.88
EPHB4-205ENST00000478459 CCDC125Q86Z20 511 aa26.82■■□□□ 1.88
EPHB4-205ENST00000478459 CCER1Q8TC90 406 aaPredicted RBP26.82■■□□□ 1.88
EPHB4-205ENST00000478459 TCP11L2Q8N4U5 519 aa26.79■■□□□ 1.88
EPHB4-205ENST00000478459 TERF2IPQ9NYB0 399 aa26.79■■□□□ 1.88
EPHB4-205ENST00000478459 AATKQ6ZMQ8 1374 aa26.79■■□□□ 1.88
EPHB4-205ENST00000478459 TOM1L2Q6ZVM7 507 aa26.78■■□□□ 1.88
EPHB4-205ENST00000478459 ARHGEF25Q86VW2 580 aa26.78■■□□□ 1.88
EPHB4-205ENST00000478459 KCNH5Q8NCM2 988 aa26.78■■□□□ 1.88
EPHB4-205ENST00000478459 NFAT5O94916 1531 aa26.78■■□□□ 1.88
EPHB4-205ENST00000478459 LTN1O94822 1766 aa26.77■■□□□ 1.88
EPHB4-205ENST00000478459 CRB1P82279 1406 aa26.76■■□□□ 1.87
EPHB4-205ENST00000478459 CSB-PGBD3P0DP91 1061 aa26.76■■□□□ 1.87
EPHB4-205ENST00000478459 PDE3BQ13370 1112 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms