RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 NPC1L1Q9UHC9 1359 aa12.21□□□□□ -0.46
COL13A1-207ENST00000478219 PDE4CQ08493 712 aa12.21□□□□□ -0.46
COL13A1-207ENST00000478219 TSR2Q969E8 191 aaKnown RBP12.21□□□□□ -0.46
COL13A1-207ENST00000478219 PPP4R3BQ5MIZ7 849 aa12.2□□□□□ -0.46
COL13A1-207ENST00000478219 RNF214Q8ND24 703 aa12.2□□□□□ -0.46
COL13A1-207ENST00000478219 NGEFQ8N5V2 710 aa12.2□□□□□ -0.46
COL13A1-207ENST00000478219 PRPF40AO75400 957 aaKnown RBP12.19□□□□□ -0.46
COL13A1-207ENST00000478219 CSPP1Q1MSJ5 1256 aa12.19□□□□□ -0.46
COL13A1-207ENST00000478219 STAC3Q96MF2 364 aa12.19□□□□□ -0.46
COL13A1-207ENST00000478219 IQGAP1P46940 1657 aa12.19□□□□□ -0.46
COL13A1-207ENST00000478219 SYCE3A1L190 88 aa12.19□□□□□ -0.46
COL13A1-207ENST00000478219 IGSF3O75054 1194 aa12.19□□□□□ -0.46
COL13A1-207ENST00000478219 RUNDC1Q96C34 613 aa12.19□□□□□ -0.46
COL13A1-207ENST00000478219 TMEM63CQ9P1W3 806 aa12.19□□□□□ -0.46
COL13A1-207ENST00000478219 IQSEC2Q5JU85 1478 aa12.19□□□□□ -0.46
COL13A1-207ENST00000478219 SHPRHQ149N8 1683 aa12.19□□□□□ -0.46
COL13A1-207ENST00000478219 NUCB1Q02818 461 aa12.18□□□□□ -0.46
COL13A1-207ENST00000478219 TBC1D9Q6ZT07 1266 aa12.18□□□□□ -0.46
COL13A1-207ENST00000478219 UNC13BO14795 1591 aa12.18□□□□□ -0.46
COL13A1-207ENST00000478219 C17orf53Q8N3J3 647 aaPredicted RBP12.18□□□□□ -0.46
COL13A1-207ENST00000478219 TMEM57Q8N5G2 664 aa12.18□□□□□ -0.46
COL13A1-207ENST00000478219 SMC4Q9NTJ3 1288 aa12.18□□□□□ -0.46
COL13A1-207ENST00000478219 ARHGAP31Q2M1Z3 1444 aa12.17□□□□□ -0.46
COL13A1-207ENST00000478219 WDR63Q8IWG1 891 aa12.17□□□□□ -0.46
COL13A1-207ENST00000478219 MYRIPQ8NFW9 859 aa12.17□□□□□ -0.46
COL13A1-207ENST00000478219 SSH1Q8WYL5 1049 aa12.17□□□□□ -0.46
COL13A1-207ENST00000478219 JPH4Q96JJ6 628 aa12.17□□□□□ -0.46
COL13A1-207ENST00000478219 ZNF830Q96NB3 372 aaPredicted RBP12.17□□□□□ -0.46
COL13A1-207ENST00000478219 MAST1Q9Y2H9 1570 aa12.17□□□□□ -0.46
COL13A1-207ENST00000478219 POLR3AO14802 1390 aaPredicted RBP12.17□□□□□ -0.46
COL13A1-207ENST00000478219 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
COL13A1-207ENST00000478219 FBLN2P98095 1184 aa12.17□□□□□ -0.46
COL13A1-207ENST00000478219 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL13A1-207ENST00000478219 PLEKHD1A6NEE1 506 aa12.16□□□□□ -0.46
COL13A1-207ENST00000478219 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
COL13A1-207ENST00000478219 RSPH4AQ5TD94 716 aa12.16□□□□□ -0.46
COL13A1-207ENST00000478219 CHD1LQ86WJ1 897 aa12.16□□□□□ -0.46
COL13A1-207ENST00000478219 ZBTB40Q9NUA8 1239 aa12.16□□□□□ -0.46
COL13A1-207ENST00000478219 PREX2Q70Z35 1606 aa12.16□□□□□ -0.46
COL13A1-207ENST00000478219 CDCA8Q53HL2 280 aa12.16□□□□□ -0.46
COL13A1-207ENST00000478219 ZGPATQ8N5A5 531 aaKnown RBP12.16□□□□□ -0.46
COL13A1-207ENST00000478219 CCDC39Q9UFE4 941 aa12.16□□□□□ -0.46
COL13A1-207ENST00000478219 NOB1Q9ULX3 412 aaKnown RBP12.16□□□□□ -0.46
COL13A1-207ENST00000478219 MCM5P33992 734 aa12.15□□□□□ -0.46
COL13A1-207ENST00000478219 EXOSC9Q06265 439 aaKnown RBP12.15□□□□□ -0.46
COL13A1-207ENST00000478219 BMP2KLQ5H9B9 411 aa12.15□□□□□ -0.46
COL13A1-207ENST00000478219 BCL11BQ9C0K0 894 aaPredicted RBP12.15□□□□□ -0.46
COL13A1-207ENST00000478219 ZDHHC9Q9Y397 364 aa12.15□□□□□ -0.46
COL13A1-207ENST00000478219 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
COL13A1-207ENST00000478219 CEP152O94986 1710 aa12.15□□□□□ -0.46
COL13A1-207ENST00000478219 DDX19BQ9UMR2 479 aa12.15□□□□□ -0.47
COL13A1-207ENST00000478219 ZBTB22O15209 634 aa12.14□□□□□ -0.47
COL13A1-207ENST00000478219 FOXD4L5Q5VV16 416 aaPredicted RBP12.14□□□□□ -0.47
COL13A1-207ENST00000478219 LRSAM1Q6UWE0 723 aa12.14□□□□□ -0.47
COL13A1-207ENST00000478219 FOXD4L4Q8WXT5 416 aaPredicted RBP12.14□□□□□ -0.47
COL13A1-207ENST00000478219 MADDQ8WXG6 1647 aa12.14□□□□□ -0.47
COL13A1-207ENST00000478219 ATP10BO94823 1461 aa12.14□□□□□ -0.47
COL13A1-207ENST00000478219 DNTTIP2Q5QJE6 756 aaKnown RBP12.14□□□□□ -0.47
COL13A1-207ENST00000478219 ATF7IPQ6VMQ6 1270 aa12.14□□□□□ -0.47
COL13A1-207ENST00000478219 TMEM51Q9NW97 253 aa12.14□□□□□ -0.47
COL13A1-207ENST00000478219 SCAF11Q99590 1463 aaKnown RBP12.13□□□□□ -0.47
COL13A1-207ENST00000478219 ANKRD45Q5TZF3 282 aa12.13□□□□□ -0.47
COL13A1-207ENST00000478219 KIAA2012Q0VF49 1180 aa12.13□□□□□ -0.47
COL13A1-207ENST00000478219 CHMP4BQ9H444 224 aaKnown RBP12.13□□□□□ -0.47
COL13A1-207ENST00000478219 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
COL13A1-207ENST00000478219 IQGAP3Q86VI3 1631 aa12.13□□□□□ -0.47
COL13A1-207ENST00000478219 GTPBP4Q9BZE4 634 aaKnown RBP12.12□□□□□ -0.47
COL13A1-207ENST00000478219 CDC42BPBQ9Y5S2 1711 aa12.12□□□□□ -0.47
COL13A1-207ENST00000478219 SAMD9LQ8IVG5 1584 aa12.12□□□□□ -0.47
COL13A1-207ENST00000478219 KANK1Q14678 1352 aa12.12□□□□□ -0.47
COL13A1-207ENST00000478219 CHD1O14646 1710 aa12.11□□□□□ -0.47
COL13A1-207ENST00000478219 CFAP74Q9C0B2 1584 aa12.11□□□□□ -0.47
COL13A1-207ENST00000478219 ATP10AO60312 1499 aa12.11□□□□□ -0.47
COL13A1-207ENST00000478219 VGLL3A8MV65 326 aa12.11□□□□□ -0.47
COL13A1-207ENST00000478219 KIF20AO95235 890 aa12.11□□□□□ -0.47
COL13A1-207ENST00000478219 PTMAP06454 111 aaKnown RBP12.11□□□□□ -0.47
COL13A1-207ENST00000478219 KDM5AP29375 1690 aaKnown RBP12.11□□□□□ -0.47
COL13A1-207ENST00000478219 ERVK-7P63135 1459 aa12.1□□□□□ -0.47
COL13A1-207ENST00000478219 MTHFSP49914 203 aa12.1□□□□□ -0.47
COL13A1-207ENST00000478219 NUCB2P80303 420 aa12.1□□□□□ -0.47
COL13A1-207ENST00000478219 CCDC27Q2M243 656 aa12.1□□□□□ -0.47
COL13A1-207ENST00000478219 MORC1Q86VD1 984 aa12.1□□□□□ -0.47
COL13A1-207ENST00000478219 TTC12Q9H892 705 aaPredicted RBP12.1□□□□□ -0.47
COL13A1-207ENST00000478219 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
COL13A1-207ENST00000478219 NAP1L2Q9ULW6 460 aaPredicted RBP12.1□□□□□ -0.47
COL13A1-207ENST00000478219 U2AF2P26368 475 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL13A1-207ENST00000478219 GTF2F1P35269 517 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL13A1-207ENST00000478219 LETM1O95202 739 aaPredicted RBP12.09□□□□□ -0.47
COL13A1-207ENST00000478219 GSPT1P15170 499 aaKnown RBP12.09□□□□□ -0.47
COL13A1-207ENST00000478219 NOLC1Q14978 699 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL13A1-207ENST00000478219 PPIP5K1Q6PFW1 1433 aa12.09□□□□□ -0.47
COL13A1-207ENST00000478219 NOS1P29475 1434 aa12.07□□□□□ -0.48
COL13A1-207ENST00000478219 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
COL13A1-207ENST00000478219 HMGN5P82970 282 aaKnown RBP12.07□□□□□ -0.48
COL13A1-207ENST00000478219 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL13A1-207ENST00000478219 SIRT2Q8IXJ6 389 aa12.07□□□□□ -0.48
COL13A1-207ENST00000478219 PIBF1Q8WXW3 757 aa12.07□□□□□ -0.48
COL13A1-207ENST00000478219 KIF3AQ9Y496 699 aa12.07□□□□□ -0.48
COL13A1-207ENST00000478219 NSD3Q9BZ95 1437 aa12.07□□□□□ -0.48
COL13A1-207ENST00000478219 C14orf37Q86TY3 774 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms