RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SNAPC4Q5SXM2 1469 aa7.36□□□□□ -1.23
SF3B6-202ENST00000478050 DDX11L8A8MPP1 907 aa7.35□□□□□ -1.23
SF3B6-202ENST00000478050 WNT7AO00755 349 aa7.35□□□□□ -1.23
SF3B6-202ENST00000478050 SNRPBP14678 240 aaKnown RBP7.35□□□□□ -1.23
SF3B6-202ENST00000478050 METTL3Q86U44 580 aaKnown RBP7.35□□□□□ -1.23
SF3B6-202ENST00000478050 THAP11Q96EK4 314 aa7.35□□□□□ -1.23
SF3B6-202ENST00000478050 SLC27A5Q9Y2P5 690 aa7.35□□□□□ -1.23
SF3B6-202ENST00000478050 ARHGAP35Q9NRY4 1499 aa7.35□□□□□ -1.23
SF3B6-202ENST00000478050 CUL7Q14999 1698 aa7.35□□□□□ -1.23
SF3B6-202ENST00000478050 MAP3K1Q13233 1512 aa7.34□□□□□ -1.23
SF3B6-202ENST00000478050 FAM181BA6NEQ2 426 aa7.34□□□□□ -1.23
SF3B6-202ENST00000478050 SMPD1P17405 629 aa7.34□□□□□ -1.23
SF3B6-202ENST00000478050 KCNV2Q8TDN2 545 aa7.34□□□□□ -1.23
SF3B6-202ENST00000478050 DAXXQ9UER7 740 aaPredicted RBP7.34□□□□□ -1.23
SF3B6-202ENST00000478050 CTTNBP2Q8WZ74 1663 aa7.34□□□□□ -1.23
SF3B6-202ENST00000478050 WDR97A6NE52 1622 aa7.34□□□□□ -1.24
SF3B6-202ENST00000478050 CFAP43Q8NDM7 1665 aa7.33□□□□□ -1.24
SF3B6-202ENST00000478050 FECHP22830 423 aa7.33□□□□□ -1.24
SF3B6-202ENST00000478050 HIC1Q14526 733 aa7.33□□□□□ -1.24
SF3B6-202ENST00000478050 TRIM47Q96LD4 638 aa7.33□□□□□ -1.24
SF3B6-202ENST00000478050 PRDM9Q9NQV7 894 aa7.33□□□□□ -1.24
SF3B6-202ENST00000478050 SALL2Q9Y467 1007 aaPredicted RBP7.33□□□□□ -1.24
SF3B6-202ENST00000478050 IGF1RP08069 1367 aa7.33□□□□□ -1.24
SF3B6-202ENST00000478050 MAGI1Q96QZ7 1491 aaPredicted RBP7.32□□□□□ -1.24
SF3B6-202ENST00000478050 BRICD5Q6PL45 260 aa7.32□□□□□ -1.24
SF3B6-202ENST00000478050 SLC16A10Q8TF71 515 aa7.32□□□□□ -1.24
SF3B6-202ENST00000478050 KIFC2Q96AC6 838 aa7.32□□□□□ -1.24
SF3B6-202ENST00000478050 RRBP1Q9P2E9 1410 aaKnown RBP7.32□□□□□ -1.24
SF3B6-202ENST00000478050 ABCA10Q8WWZ4 1543 aa7.32□□□□□ -1.24
SF3B6-202ENST00000478050 TSPOAP1O95153 1857 aa7.31□□□□□ -1.24
SF3B6-202ENST00000478050 TIAM1Q13009 1591 aa7.31□□□□□ -1.24
SF3B6-202ENST00000478050 GRIPAP1Q4V328 841 aa7.31□□□□□ -1.24
SF3B6-202ENST00000478050 DIP2BQ9P265 1576 aa7.31□□□□□ -1.24
SF3B6-202ENST00000478050 CARMIL1Q5VZK9 1371 aa7.31□□□□□ -1.24
SF3B6-202ENST00000478050 CLSPNQ9HAW4 1339 aa7.3□□□□□ -1.24
SF3B6-202ENST00000478050 J3QL48 77 aa7.3□□□□□ -1.24
SF3B6-202ENST00000478050 RANGAP1P46060 587 aaPredicted RBP7.3□□□□□ -1.24
SF3B6-202ENST00000478050 GCGRP47871 477 aa7.3□□□□□ -1.24
SF3B6-202ENST00000478050 TRIM32Q13049 653 aa7.3□□□□□ -1.24
SF3B6-202ENST00000478050 SUZ12Q15022 739 aaKnown RBP7.3□□□□□ -1.24
SF3B6-202ENST00000478050 MSS51Q4VC12 460 aa7.3□□□□□ -1.24
SF3B6-202ENST00000478050 SULF1Q8IWU6 871 aa7.3□□□□□ -1.24
SF3B6-202ENST00000478050 MRGPRX2Q96LB1 330 aa7.3□□□□□ -1.24
SF3B6-202ENST00000478050 EFCAB5A4FU69 1503 aa7.3□□□□□ -1.24
SF3B6-202ENST00000478050 DIEXFQ68CQ4 756 aaKnown RBP7.29□□□□□ -1.24
SF3B6-202ENST00000478050 REPIN1Q9BWE0 567 aaKnown RBP7.29□□□□□ -1.24
SF3B6-202ENST00000478050 TARBP1Q13395 1621 aaKnown RBP7.29□□□□□ -1.24
SF3B6-202ENST00000478050 TDRD9Q8NDG6 1382 aaKnown RBP7.29□□□□□ -1.24
SF3B6-202ENST00000478050 POLA1P09884 1462 aaPredicted RBP7.29□□□□□ -1.24
SF3B6-202ENST00000478050 FHAD1B1AJZ9 1412 aa7.28□□□□□ -1.24
SF3B6-202ENST00000478050 MAPKBP1O60336 1514 aa7.28□□□□□ -1.24
SF3B6-202ENST00000478050 Q3C1V9 767 aa7.28□□□□□ -1.24
SF3B6-202ENST00000478050 HPS1Q92902 700 aa7.28□□□□□ -1.24
SF3B6-202ENST00000478050 SEMA3EO15041 775 aa7.27□□□□□ -1.25
SF3B6-202ENST00000478050 LCE2CQ5TA81 110 aa7.27□□□□□ -1.25
SF3B6-202ENST00000478050 RNF19BQ6ZMZ0 732 aa7.27□□□□□ -1.25
SF3B6-202ENST00000478050 ABCA5Q8WWZ7 1642 aa7.27□□□□□ -1.25
SF3B6-202ENST00000478050 PCF11O94913 1555 aaKnown RBP7.26□□□□□ -1.25
SF3B6-202ENST00000478050 CCNB3Q8WWL7 1395 aa7.26□□□□□ -1.25
SF3B6-202ENST00000478050 GNPATO15228 680 aa7.26□□□□□ -1.25
SF3B6-202ENST00000478050 P3H3Q8IVL6 736 aa7.26□□□□□ -1.25
SF3B6-202ENST00000478050 NLRP7Q8WX94 980 aa7.26□□□□□ -1.25
SF3B6-202ENST00000478050 RAD54L2Q9Y4B4 1467 aa7.25□□□□□ -1.25
SF3B6-202ENST00000478050 KANK4Q5T7N3 995 aaPredicted RBP7.25□□□□□ -1.25
SF3B6-202ENST00000478050 CCDC24Q8N4L8 307 aa7.25□□□□□ -1.25
SF3B6-202ENST00000478050 GRIN2BQ13224 1484 aa7.24□□□□□ -1.25
SF3B6-202ENST00000478050 LRRC9Q6ZRR7 1453 aa7.24□□□□□ -1.25
SF3B6-202ENST00000478050 FYCO1Q9BQS8 1478 aa7.24□□□□□ -1.25
SF3B6-202ENST00000478050 DHX57Q6P158 1386 aaKnown RBP7.24□□□□□ -1.25
SF3B6-202ENST00000478050 RC3H1Q5TC82 1133 aaKnown RBP7.24□□□□□ -1.25
SF3B6-202ENST00000478050 NXF1Q9UBU9 619 aaKnown RBP7.24□□□□□ -1.25
SF3B6-202ENST00000478050 MMP16P51512 607 aa7.23□□□□□ -1.25
SF3B6-202ENST00000478050 SMYD5Q6GMV2 418 aa7.23□□□□□ -1.25
SF3B6-202ENST00000478050 ZSCAN1Q8NBB4 408 aa7.23□□□□□ -1.25
SF3B6-202ENST00000478050 CEP170Q5SW79 1584 aa7.23□□□□□ -1.25
SF3B6-202ENST00000478050 SAMD9Q5K651 1589 aa7.22□□□□□ -1.25
SF3B6-202ENST00000478050 ALDH1A1P00352 501 aa7.22□□□□□ -1.25
SF3B6-202ENST00000478050 CENPBP07199 599 aaPredicted RBP7.22□□□□□ -1.25
SF3B6-202ENST00000478050 GMPRP36959 345 aa7.22□□□□□ -1.25
SF3B6-202ENST00000478050 RBM26Q5T8P6 1007 aaKnown RBP7.22□□□□□ -1.25
SF3B6-202ENST00000478050 IRF7Q92985 503 aa7.22□□□□□ -1.25
SF3B6-202ENST00000478050 USB1Q9BQ65 265 aaKnown RBP7.22□□□□□ -1.25
SF3B6-202ENST00000478050 PBRM1Q86U86 1689 aa7.22□□□□□ -1.25
SF3B6-202ENST00000478050 CASKIN1Q8WXD9 1431 aa7.21□□□□□ -1.25
SF3B6-202ENST00000478050 WNT7BP56706 349 aa7.21□□□□□ -1.26
SF3B6-202ENST00000478050 ACIN1Q9UKV3 1341 aaKnown RBP7.21□□□□□ -1.26
SF3B6-202ENST00000478050 DXOO77932 396 aaKnown RBP7.2□□□□□ -1.26
SF3B6-202ENST00000478050 FMN1Q68DA7 1419 aa7.19□□□□□ -1.26
SF3B6-202ENST00000478050 LRRIQ1Q96JM4 1722 aa7.19□□□□□ -1.26
SF3B6-202ENST00000478050 NPAS3Q8IXF0 933 aa7.19□□□□□ -1.26
SF3B6-202ENST00000478050 FHOD3Q2V2M9 1422 aa7.18□□□□□ -1.26
SF3B6-202ENST00000478050 WASF2Q9Y6W5 498 aa7.18□□□□□ -1.26
SF3B6-202ENST00000478050 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.18□□□□□ -1.26
SF3B6-202ENST00000478050 CAPN5O15484 640 aaPredicted RBP7.17□□□□□ -1.26
SF3B6-202ENST00000478050 SKOR1P84550 965 aa7.17□□□□□ -1.26
SF3B6-202ENST00000478050 PHOX2BQ99453 314 aa7.17□□□□□ -1.26
SF3B6-202ENST00000478050 SETD5Q9C0A6 1442 aa7.17□□□□□ -1.26
SF3B6-202ENST00000478050 SUPT6HQ7KZ85 1726 aaKnown RBP7.16□□□□□ -1.26
SF3B6-202ENST00000478050 KDM4AO75164 1064 aa7.16□□□□□ -1.26
SF3B6-202ENST00000478050 BMP1P13497 986 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms