RNA–Protein interactions for RNA: ENST00000477876.1

NUP58-210, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-210ENST00000477876 SPDYE5A6NIY4 337 aa10.16□□□□□ -0.78
NUP58-210ENST00000477876 RPIAP49247 311 aa10.16□□□□□ -0.78
NUP58-210ENST00000477876 MTMR2Q13614 643 aa10.16□□□□□ -0.78
NUP58-210ENST00000477876 TPRNQ4KMQ1 711 aa10.16□□□□□ -0.78
NUP58-210ENST00000477876 MYSM1Q5VVJ2 828 aa10.16□□□□□ -0.78
NUP58-210ENST00000477876 RSPH6AQ9H0K4 717 aa10.16□□□□□ -0.78
NUP58-210ENST00000477876 PCDHB15Q9Y5E8 787 aa10.16□□□□□ -0.78
NUP58-210ENST00000477876 CEP170Q5SW79 1584 aa10.16□□□□□ -0.78
NUP58-210ENST00000477876 GRIN2AQ12879 1464 aa10.16□□□□□ -0.78
NUP58-210ENST00000477876 GFRA3O60609 400 aa10.15□□□□□ -0.78
NUP58-210ENST00000477876 JUNDP17535 347 aa10.15□□□□□ -0.78
NUP58-210ENST00000477876 TRAF7Q6Q0C0 670 aa10.15□□□□□ -0.78
NUP58-210ENST00000477876 NUP160Q12769 1436 aa10.15□□□□□ -0.79
NUP58-210ENST00000477876 WRNQ14191 1432 aaPredicted RBP eCLIP10.15□□□□□ -0.79
NUP58-210ENST00000477876 ZBTB24O43167 697 aaPredicted RBP10.14□□□□□ -0.79
NUP58-210ENST00000477876 CD2BP2O95400 341 aaKnown RBP10.14□□□□□ -0.79
NUP58-210ENST00000477876 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
NUP58-210ENST00000477876 PRPF38BQ5VTL8 546 aaKnown RBP10.13□□□□□ -0.79
NUP58-210ENST00000477876 TOP2BQ02880 1626 aa10.13□□□□□ -0.79
NUP58-210ENST00000477876 ADAMTS12P58397 1594 aa10.13□□□□□ -0.79
NUP58-210ENST00000477876 BIVM-ERCC5R4GMW8 1640 aa10.12□□□□□ -0.79
NUP58-210ENST00000477876 TUSC1Q2TAM9 212 aa10.12□□□□□ -0.79
NUP58-210ENST00000477876 CCDC24Q8N4L8 307 aa10.12□□□□□ -0.79
NUP58-210ENST00000477876 PRR7Q8TB68 274 aa10.12□□□□□ -0.79
NUP58-210ENST00000477876 DDRGK1Q96HY6 314 aa10.12□□□□□ -0.79
NUP58-210ENST00000477876 FAM117AQ9C073 453 aa10.12□□□□□ -0.79
NUP58-210ENST00000477876 ZBTB3Q9H5J0 574 aa10.12□□□□□ -0.79
NUP58-210ENST00000477876 PDZRN3Q9UPQ7 1066 aa10.12□□□□□ -0.79
NUP58-210ENST00000477876 HRCP23327 699 aa10.11□□□□□ -0.79
NUP58-210ENST00000477876 LIMD1Q9UGP4 676 aa10.11□□□□□ -0.79
NUP58-210ENST00000477876 FHAD1B1AJZ9 1412 aa10.1□□□□□ -0.79
NUP58-210ENST00000477876 CSPP1Q1MSJ5 1256 aa10.1□□□□□ -0.79
NUP58-210ENST00000477876 DESI1Q6ICB0 168 aa10.1□□□□□ -0.79
NUP58-210ENST00000477876 TRIM67Q6ZTA4 783 aa10.1□□□□□ -0.79
NUP58-210ENST00000477876 SHROOM2Q13796 1616 aa10.09□□□□□ -0.79
NUP58-210ENST00000477876 NRG2O14511 850 aaPredicted RBP10.09□□□□□ -0.79
NUP58-210ENST00000477876 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
NUP58-210ENST00000477876 POLR3EQ9NVU0 708 aa10.09□□□□□ -0.79
NUP58-210ENST00000477876 CLK2P49760 499 aaKnown RBP10.08□□□□□ -0.8
NUP58-210ENST00000477876 NEUROD2Q15784 382 aa10.08□□□□□ -0.8
NUP58-210ENST00000477876 CABLES1Q8TDN4 633 aa10.08□□□□□ -0.8
NUP58-210ENST00000477876 NUTM2BA6NNL0 878 aaPredicted RBP10.07□□□□□ -0.8
NUP58-210ENST00000477876 NUTM2EB1AL46 878 aaPredicted RBP10.07□□□□□ -0.8
NUP58-210ENST00000477876 GDF9O60383 454 aa10.07□□□□□ -0.8
NUP58-210ENST00000477876 LILRB3O75022 631 aa10.07□□□□□ -0.8
NUP58-210ENST00000477876 PRR20EP86478 221 aa10.07□□□□□ -0.8
NUP58-210ENST00000477876 PRR20CP86479 221 aa10.07□□□□□ -0.8
NUP58-210ENST00000477876 PRR20DP86480 221 aa10.07□□□□□ -0.8
NUP58-210ENST00000477876 PRR20BP86481 221 aa10.07□□□□□ -0.8
NUP58-210ENST00000477876 PRR20AP86496 221 aa10.07□□□□□ -0.8
NUP58-210ENST00000477876 SKIV2LQ15477 1246 aaKnown RBP10.07□□□□□ -0.8
NUP58-210ENST00000477876 NUTM2DQ5VT03 806 aaPredicted RBP10.07□□□□□ -0.8
NUP58-210ENST00000477876 NUTM2AQ8IVF1 878 aaPredicted RBP10.07□□□□□ -0.8
NUP58-210ENST00000477876 ERICH3Q5RHP9 1530 aa10.07□□□□□ -0.8
NUP58-210ENST00000477876 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
NUP58-210ENST00000477876 CFAP99D6REC4 459 aa10.06□□□□□ -0.8
NUP58-210ENST00000477876 CCNYL3P0C7X3 344 aa10.06□□□□□ -0.8
NUP58-210ENST00000477876 TRIM32Q13049 653 aa10.06□□□□□ -0.8
NUP58-210ENST00000477876 QPCTQ16769 361 aa10.06□□□□□ -0.8
NUP58-210ENST00000477876 PTPRNQ16849 979 aa10.06□□□□□ -0.8
NUP58-210ENST00000477876 PRG4Q92954 1404 aaPredicted RBP10.06□□□□□ -0.8
NUP58-210ENST00000477876 SH3D19Q5HYK7 790 aa10.05□□□□□ -0.8
NUP58-210ENST00000477876 EVA1BQ9NVM1 165 aa10.05□□□□□ -0.8
NUP58-210ENST00000477876 FOXC1Q12948 553 aa10.04□□□□□ -0.8
NUP58-210ENST00000477876 PTCRAQ6ISU1 281 aaPredicted RBP10.04□□□□□ -0.8
NUP58-210ENST00000477876 LYPD8Q6UX82 237 aa10.04□□□□□ -0.8
NUP58-210ENST00000477876 PKD2L1Q9P0L9 805 aa10.04□□□□□ -0.8
NUP58-210ENST00000477876 TNFRSF10AO00220 468 aa10.03□□□□□ -0.8
NUP58-210ENST00000477876 BRPF1P55201 1214 aaPredicted RBP10.02□□□□□ -0.81
NUP58-210ENST00000477876 RTL5Q5HYW3 569 aaPredicted RBP10.02□□□□□ -0.81
NUP58-210ENST00000477876 IGF1RP08069 1367 aa10.01□□□□□ -0.81
NUP58-210ENST00000477876 KCNH2Q12809 1159 aa10.01□□□□□ -0.81
NUP58-210ENST00000477876 ATP1B4Q9UN42 357 aaPredicted RBP10.01□□□□□ -0.81
NUP58-210ENST00000477876 PROCA1Q8NCQ7 364 aaPredicted RBP10□□□□□ -0.81
NUP58-210ENST00000477876 IL27Q8NEV9 243 aa10□□□□□ -0.81
NUP58-210ENST00000477876 TSC1Q92574 1164 aa10□□□□□ -0.81
NUP58-210ENST00000477876 KIF13AQ9H1H9 1805 aa10□□□□□ -0.81
NUP58-210ENST00000477876 WNT7AO00755 349 aa9.99□□□□□ -0.81
NUP58-210ENST00000477876 ZNF775Q96BV0 537 aaPredicted RBP9.99□□□□□ -0.81
NUP58-210ENST00000477876 RUSC2Q8N2Y8 1516 aa9.98□□□□□ -0.81
NUP58-210ENST00000477876 WNT7BP56706 349 aa9.98□□□□□ -0.81
NUP58-210ENST00000477876 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.98□□□□□ -0.81
NUP58-210ENST00000477876 UNC93B1Q9H1C4 597 aa9.98□□□□□ -0.81
NUP58-210ENST00000477876 PER1O15534 1290 aaPredicted RBP9.97□□□□□ -0.81
NUP58-210ENST00000477876 DGAT1O75907 488 aa9.97□□□□□ -0.81
NUP58-210ENST00000477876 PRKCSHP14314 528 aaPredicted RBP9.97□□□□□ -0.81
NUP58-210ENST00000477876 CTHP32929 405 aa9.97□□□□□ -0.81
NUP58-210ENST00000477876 SKOR1P84550 965 aa9.97□□□□□ -0.81
NUP58-210ENST00000477876 ZNF787Q6DD87 383 aa9.97□□□□□ -0.81
NUP58-210ENST00000477876 CYP4X1Q8N118 509 aa9.97□□□□□ -0.81
NUP58-210ENST00000477876 HELBQ8NG08 1087 aaPredicted RBP9.97□□□□□ -0.81
NUP58-210ENST00000477876 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
NUP58-210ENST00000477876 FAM69CQ0P6D2 419 aa9.96□□□□□ -0.82
NUP58-210ENST00000477876 PKDCCQ504Y2 493 aa9.96□□□□□ -0.82
NUP58-210ENST00000477876 RC3H1Q5TC82 1133 aaKnown RBP9.96□□□□□ -0.82
NUP58-210ENST00000477876 TOR4AQ9NXH8 423 aa9.96□□□□□ -0.82
NUP58-210ENST00000477876 F12P00748 615 aaPredicted RBP9.95□□□□□ -0.82
NUP58-210ENST00000477876 PPP2R2DQ66LE6 453 aa9.95□□□□□ -0.82
NUP58-210ENST00000477876 MRGPRX2Q96LB1 330 aa9.95□□□□□ -0.82
NUP58-210ENST00000477876 ABCC10Q5T3U5 1492 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms