RNA–Protein interactions for RNA: ENST00000476953.6

PHF11-208, Transcript of PHD finger protein 11, humanhuman

TSL 5

Gene PHF11, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-208ENST00000476953 CABP2Q9NPB3 220 aa28.97■■■□□ 2.23
PHF11-208ENST00000476953 TONSLQ96HA7 1378 aa28.97■■■□□ 2.23
PHF11-208ENST00000476953 ACEP12821 1306 aa28.95■■■□□ 2.23
PHF11-208ENST00000476953 PPIP5K1Q6PFW1 1433 aa28.95■■■□□ 2.23
PHF11-208ENST00000476953 HAP1P54257 671 aaPredicted RBP28.95■■■□□ 2.22
PHF11-208ENST00000476953 RALGAPBQ86X10 1494 aa28.95■■■□□ 2.22
PHF11-208ENST00000476953 SRPK2P78362 688 aaKnown RBP28.94■■■□□ 2.22
PHF11-208ENST00000476953 CCDC61Q9Y6R9 512 aa28.94■■■□□ 2.22
PHF11-208ENST00000476953 PAK3O75914 559 aaPredicted RBP28.93■■■□□ 2.22
PHF11-208ENST00000476953 PLEKHG3A1L390 1219 aa28.92■■■□□ 2.22
PHF11-208ENST00000476953 COL14A1Q05707 1796 aaKnown RBP28.91■■■□□ 2.22
PHF11-208ENST00000476953 UNC5CLQ8IV45 518 aa28.89■■■□□ 2.22
PHF11-208ENST00000476953 BRWD3Q6RI45 1802 aa28.89■■■□□ 2.22
PHF11-208ENST00000476953 FAM83GA6ND36 823 aa28.88■■■□□ 2.21
PHF11-208ENST00000476953 UPF1Q92900 1129 aaKnown RBP eCLIP28.88■■■□□ 2.21
PHF11-208ENST00000476953 AKAP12Q02952 1782 aa28.88■■■□□ 2.21
PHF11-208ENST00000476953 NRKQ7Z2Y5 1582 aa28.87■■■□□ 2.21
PHF11-208ENST00000476953 NUTM2GQ5VZR2 741 aa28.86■■■□□ 2.21
PHF11-208ENST00000476953 GJD4Q96KN9 370 aaPredicted RBP28.86■■■□□ 2.21
PHF11-208ENST00000476953 CARD11Q9BXL7 1154 aa28.83■■■□□ 2.21
PHF11-208ENST00000476953 EVC2Q86UK5 1308 aa28.83■■■□□ 2.21
PHF11-208ENST00000476953 CABP1Q9NZU7 370 aa28.82■■■□□ 2.2
PHF11-208ENST00000476953 PIK3C2AO00443 1686 aa28.81■■■□□ 2.2
PHF11-208ENST00000476953 USP6P35125 1406 aa28.81■■■□□ 2.2
PHF11-208ENST00000476953 EP400Q96L91 3159 aa28.79■■■□□ 2.2
PHF11-208ENST00000476953 SBNO2Q9Y2G9 1366 aa28.78■■■□□ 2.2
PHF11-208ENST00000476953 KIAA0232Q92628 1395 aa28.77■■■□□ 2.2
PHF11-208ENST00000476953 VPS72Q15906 364 aa28.77■■■□□ 2.2
PHF11-208ENST00000476953 BTG4Q9NY30 223 aa28.77■■■□□ 2.2
PHF11-208ENST00000476953 MON2Q7Z3U7 1717 aa28.77■■■□□ 2.2
PHF11-208ENST00000476953 SSH2Q76I76 1423 aa28.76■■■□□ 2.19
PHF11-208ENST00000476953 ABTB2Q8N961 1025 aa28.75■■■□□ 2.19
PHF11-208ENST00000476953 USP19O94966 1318 aa28.74■■■□□ 2.19
PHF11-208ENST00000476953 LMO7Q8WWI1 1683 aa28.74■■■□□ 2.19
PHF11-208ENST00000476953 CHRNA2Q15822 529 aa28.73■■■□□ 2.19
PHF11-208ENST00000476953 PCGF6Q9BYE7 350 aa28.73■■■□□ 2.19
PHF11-208ENST00000476953 PRDM11Q9NQV5 511 aa28.73■■■□□ 2.19
PHF11-208ENST00000476953 ZC3H6P61129 1189 aaKnown RBP28.72■■■□□ 2.19
PHF11-208ENST00000476953 ATAD2Q6PL18 1390 aa28.72■■■□□ 2.19
PHF11-208ENST00000476953 CCDC9Q9Y3X0 531 aaKnown RBP28.71■■■□□ 2.19
PHF11-208ENST00000476953 SLIT3O75094 1523 aa28.7■■■□□ 2.19
PHF11-208ENST00000476953 CPSF1Q10570 1443 aaKnown RBP28.69■■■□□ 2.18
PHF11-208ENST00000476953 BRD4O60885 1362 aaPredicted RBP28.69■■■□□ 2.18
PHF11-208ENST00000476953 CD163L1Q9NR16 1453 aa28.69■■■□□ 2.18
PHF11-208ENST00000476953 CAMTA1Q9Y6Y1 1673 aa28.67■■■□□ 2.18
PHF11-208ENST00000476953 THSD7AQ9UPZ6 1657 aa28.67■■■□□ 2.18
PHF11-208ENST00000476953 SEPT12Q8IYM1 358 aa28.66■■■□□ 2.18
PHF11-208ENST00000476953 NLRP13Q86W25 1043 aa28.64■■■□□ 2.18
PHF11-208ENST00000476953 CPDO75976 1380 aa28.63■■■□□ 2.17
PHF11-208ENST00000476953 COL18A1P39060 1754 aa28.63■■■□□ 2.17
PHF11-208ENST00000476953 ONECUT3O60422 494 aaPredicted RBP28.63■■■□□ 2.17
PHF11-208ENST00000476953 TESK2Q96S53 571 aa28.63■■■□□ 2.17
PHF11-208ENST00000476953 SPATA31A5Q5VU36 1347 aa28.63■■■□□ 2.17
PHF11-208ENST00000476953 SPATA31A7Q8IWB4 1347 aa28.63■■■□□ 2.17
PHF11-208ENST00000476953 ST20-MTHFSA0A0A6YYL1 179 aa28.62■■■□□ 2.17
PHF11-208ENST00000476953 GCP02774 474 aa28.62■■■□□ 2.17
PHF11-208ENST00000476953 TTC21BQ7Z4L5 1316 aa28.62■■■□□ 2.17
PHF11-208ENST00000476953 RGPD5Q99666 1765 aa28.62■■■□□ 2.17
PHF11-208ENST00000476953 NLRP6P59044 892 aa28.61■■■□□ 2.17
PHF11-208ENST00000476953 FAM98CQ17RN3 349 aaKnown RBP28.61■■■□□ 2.17
PHF11-208ENST00000476953 KTN1Q86UP2 1357 aaKnown RBP28.61■■■□□ 2.17
PHF11-208ENST00000476953 USP54Q70EL1 1684 aa28.61■■■□□ 2.17
PHF11-208ENST00000476953 STRN4Q9NRL3 753 aa28.6■■■□□ 2.17
PHF11-208ENST00000476953 ZNF692Q9BU19 519 aaPredicted RBP28.57■■■□□ 2.16
PHF11-208ENST00000476953 NFAT5O94916 1531 aa28.56■■■□□ 2.16
PHF11-208ENST00000476953 SPATA31A1Q5TZJ5 1347 aa28.56■■■□□ 2.16
PHF11-208ENST00000476953 USP47Q96K76 1375 aa28.56■■■□□ 2.16
PHF11-208ENST00000476953 SLC12A5Q9H2X9 1139 aa28.56■■■□□ 2.16
PHF11-208ENST00000476953 COL5A2P05997 1499 aaPredicted RBP28.55■■■□□ 2.16
PHF11-208ENST00000476953 CLSPNQ9HAW4 1339 aa28.55■■■□□ 2.16
PHF11-208ENST00000476953 A0A0G2JS52 829 aa28.55■■■□□ 2.16
PHF11-208ENST00000476953 MYT1Q01538 1121 aa28.55■■■□□ 2.16
PHF11-208ENST00000476953 TTC21AQ8NDW8 1320 aa28.54■■■□□ 2.16
PHF11-208ENST00000476953 TMC1Q8TDI8 760 aa28.54■■■□□ 2.16
PHF11-208ENST00000476953 A0A1W2PP64 1363 aa28.53■■■□□ 2.16
PHF11-208ENST00000476953 ZRANB1Q9UGI0 708 aa28.53■■■□□ 2.16
PHF11-208ENST00000476953 ZBTB7CA1YPR0 619 aa28.52■■■□□ 2.16
PHF11-208ENST00000476953 LARP1Q6PKG0 1096 aaKnown RBP28.52■■■□□ 2.16
PHF11-208ENST00000476953 KRT27Q7Z3Y8 459 aa28.52■■■□□ 2.16
PHF11-208ENST00000476953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.51■■■□□ 2.15
PHF11-208ENST00000476953 WNK3Q9BYP7 1800 aa28.5■■■□□ 2.15
PHF11-208ENST00000476953 LTN1O94822 1766 aa28.5■■■□□ 2.15
PHF11-208ENST00000476953 SOX12O15370 315 aa28.49■■■□□ 2.15
PHF11-208ENST00000476953 USP35Q9P2H5 1018 aa28.49■■■□□ 2.15
PHF11-208ENST00000476953 FAM182BQ5T319 152 aa28.48■■■□□ 2.15
PHF11-208ENST00000476953 NME9Q86XW9 330 aa28.48■■■□□ 2.15
PHF11-208ENST00000476953 AATKQ6ZMQ8 1374 aa28.48■■■□□ 2.15
PHF11-208ENST00000476953 BLMP54132 1417 aaPredicted RBP28.47■■■□□ 2.15
PHF11-208ENST00000476953 EDC4Q6P2E9 1401 aaKnown RBP28.47■■■□□ 2.15
PHF11-208ENST00000476953 PUS7Q96PZ0 661 aaKnown RBP28.47■■■□□ 2.15
PHF11-208ENST00000476953 MYOM1P52179 1685 aa28.47■■■□□ 2.15
PHF11-208ENST00000476953 EVA1CP58658 441 aa28.46■■■□□ 2.15
PHF11-208ENST00000476953 PARP4Q9UKK3 1724 aaKnown RBP28.46■■■□□ 2.15
PHF11-208ENST00000476953 TIMELESSQ9UNS1 1208 aa28.45■■■□□ 2.14
PHF11-208ENST00000476953 AXIN2Q9Y2T1 843 aa28.45■■■□□ 2.14
PHF11-208ENST00000476953 TNS1Q9HBL0 1735 aaKnown RBP28.45■■■□□ 2.14
PHF11-208ENST00000476953 USP31Q70CQ4 1352 aa28.45■■■□□ 2.14
PHF11-208ENST00000476953 HDGFL2Q7Z4V5 671 aaPredicted RBP28.44■■■□□ 2.14
PHF11-208ENST00000476953 RGPD1P0DJD0 1748 aa28.43■■■□□ 2.14
PHF11-208ENST00000476953 ARHGEF25Q86VW2 580 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms