RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 CARD14Q9BXL6 1004 aa16.71■□□□□ 0.27
CDKAL1-203ENST00000476517 STRCP1A6NGW2 1772 aa16.7■□□□□ 0.26
CDKAL1-203ENST00000476517 NRKQ7Z2Y5 1582 aa16.7■□□□□ 0.26
CDKAL1-203ENST00000476517 HNRNPUQ00839 825 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDKAL1-203ENST00000476517 INSRP06213 1382 aa16.67■□□□□ 0.26
CDKAL1-203ENST00000476517 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
CDKAL1-203ENST00000476517 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
CDKAL1-203ENST00000476517 EDC4Q6P2E9 1401 aaKnown RBP16.66■□□□□ 0.26
CDKAL1-203ENST00000476517 ANKARQ7Z5J8 1434 aa16.66■□□□□ 0.26
CDKAL1-203ENST00000476517 CPSF1Q10570 1443 aaKnown RBP16.65■□□□□ 0.26
CDKAL1-203ENST00000476517 MORC1Q86VD1 984 aa16.65■□□□□ 0.26
CDKAL1-203ENST00000476517 PNISRQ8TF01 805 aaKnown RBP16.65■□□□□ 0.26
CDKAL1-203ENST00000476517 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
CDKAL1-203ENST00000476517 CCDC61Q9Y6R9 512 aa16.65■□□□□ 0.26
CDKAL1-203ENST00000476517 KCNA6P17658 529 aa16.64■□□□□ 0.25
CDKAL1-203ENST00000476517 CABP1Q9NZU7 370 aa16.64■□□□□ 0.25
CDKAL1-203ENST00000476517 SHPRHQ149N8 1683 aa16.64■□□□□ 0.25
CDKAL1-203ENST00000476517 UPF1Q92900 1129 aaKnown RBP eCLIP16.63■□□□□ 0.25
CDKAL1-203ENST00000476517 ADGRL3Q9HAR2 1447 aa16.62■□□□□ 0.25
CDKAL1-203ENST00000476517 MAP2P11137 1827 aaKnown RBP16.62■□□□□ 0.25
CDKAL1-203ENST00000476517 ZBED9Q6R2W3 1325 aa16.62■□□□□ 0.25
CDKAL1-203ENST00000476517 BLMP54132 1417 aaPredicted RBP16.61■□□□□ 0.25
CDKAL1-203ENST00000476517 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
CDKAL1-203ENST00000476517 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
CDKAL1-203ENST00000476517 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDKAL1-203ENST00000476517 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
CDKAL1-203ENST00000476517 KIF1AQ12756 1690 aa16.58■□□□□ 0.24
CDKAL1-203ENST00000476517 USP54Q70EL1 1684 aa16.58■□□□□ 0.24
CDKAL1-203ENST00000476517 XIRP1Q702N8 1843 aaKnown RBP16.57■□□□□ 0.24
CDKAL1-203ENST00000476517 CFAP53Q96M91 514 aa16.57■□□□□ 0.24
CDKAL1-203ENST00000476517 USP6P35125 1406 aa16.56■□□□□ 0.24
CDKAL1-203ENST00000476517 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
CDKAL1-203ENST00000476517 FYB1O15117 783 aa16.54■□□□□ 0.24
CDKAL1-203ENST00000476517 CAPN15O75808 1086 aa16.54■□□□□ 0.24
CDKAL1-203ENST00000476517 GGNBP2Q9H3C7 697 aa16.54■□□□□ 0.24
CDKAL1-203ENST00000476517 PIK3C2AO00443 1686 aa16.53■□□□□ 0.24
CDKAL1-203ENST00000476517 ACEP12821 1306 aa16.52■□□□□ 0.24
CDKAL1-203ENST00000476517 TNNT2P45379 298 aaPredicted RBP16.52■□□□□ 0.24
CDKAL1-203ENST00000476517 C14orf37Q86TY3 774 aa16.52■□□□□ 0.24
CDKAL1-203ENST00000476517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.52■□□□□ 0.24
CDKAL1-203ENST00000476517 NCOA3Q9Y6Q9 1424 aa16.51■□□□□ 0.23
CDKAL1-203ENST00000476517 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
CDKAL1-203ENST00000476517 NUTM2FA1L443 756 aa16.5■□□□□ 0.23
CDKAL1-203ENST00000476517 DCCP43146 1447 aa16.5■□□□□ 0.23
CDKAL1-203ENST00000476517 SMG6Q86US8 1419 aaKnown RBP16.5■□□□□ 0.23
CDKAL1-203ENST00000476517 MARF1Q9Y4F3 1742 aaKnown RBP16.5■□□□□ 0.23
CDKAL1-203ENST00000476517 COL3A1P02461 1466 aaPredicted RBP16.49■□□□□ 0.23
CDKAL1-203ENST00000476517 CDK12Q9NYV4 1490 aaPredicted RBP16.49■□□□□ 0.23
CDKAL1-203ENST00000476517 MTHFSP49914 203 aa16.49■□□□□ 0.23
CDKAL1-203ENST00000476517 NGDNQ8NEJ9 315 aaKnown RBP16.49■□□□□ 0.23
CDKAL1-203ENST00000476517 COG3Q96JB2 828 aa16.49■□□□□ 0.23
CDKAL1-203ENST00000476517 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
CDKAL1-203ENST00000476517 OVOS2A0A0J9YW53 1432 aa16.48■□□□□ 0.23
CDKAL1-203ENST00000476517 OVOS2Q6IE36 1432 aa16.48■□□□□ 0.23
CDKAL1-203ENST00000476517 PROSER2Q86WR7 435 aaPredicted RBP16.48■□□□□ 0.23
CDKAL1-203ENST00000476517 ROBO1Q9Y6N7 1651 aa16.48■□□□□ 0.23
CDKAL1-203ENST00000476517 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
CDKAL1-203ENST00000476517 TTC21BQ7Z4L5 1316 aa16.47■□□□□ 0.23
CDKAL1-203ENST00000476517 SSH2Q76I76 1423 aa16.47■□□□□ 0.23
CDKAL1-203ENST00000476517 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
CDKAL1-203ENST00000476517 NME9Q86XW9 330 aa16.46■□□□□ 0.23
CDKAL1-203ENST00000476517 ADAMTS8Q9UP79 889 aa16.46■□□□□ 0.23
CDKAL1-203ENST00000476517 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
CDKAL1-203ENST00000476517 LTN1O94822 1766 aa16.44■□□□□ 0.22
CDKAL1-203ENST00000476517 JCADQ9P266 1359 aa16.44■□□□□ 0.22
CDKAL1-203ENST00000476517 PMFBP1Q8TBY8 1022 aa16.44■□□□□ 0.22
CDKAL1-203ENST00000476517 PHF8Q9UPP1 1060 aa16.44■□□□□ 0.22
CDKAL1-203ENST00000476517 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
CDKAL1-203ENST00000476517 TRPM3Q9HCF6 1732 aaPredicted RBP16.44■□□□□ 0.22
CDKAL1-203ENST00000476517 PDE3BQ13370 1112 aa16.43■□□□□ 0.22
CDKAL1-203ENST00000476517 TMEM94Q12767 1356 aa16.42■□□□□ 0.22
CDKAL1-203ENST00000476517 USP31Q70CQ4 1352 aa16.42■□□□□ 0.22
CDKAL1-203ENST00000476517 NGEFQ8N5V2 710 aa16.42■□□□□ 0.22
CDKAL1-203ENST00000476517 PNPLA6Q8IY17 1366 aa16.41■□□□□ 0.22
CDKAL1-203ENST00000476517 ZNF772Q68DY9 489 aaPredicted RBP16.41■□□□□ 0.22
CDKAL1-203ENST00000476517 C19orf44Q9H6X5 657 aa16.41■□□□□ 0.22
CDKAL1-203ENST00000476517 MSH6P52701 1360 aa16.4■□□□□ 0.22
CDKAL1-203ENST00000476517 PEAK1Q9H792 1746 aa16.4■□□□□ 0.22
CDKAL1-203ENST00000476517 MYCNP04198 464 aaPredicted RBP16.4■□□□□ 0.22
CDKAL1-203ENST00000476517 RBM33Q96EV2 1170 aaKnown RBP16.4■□□□□ 0.22
CDKAL1-203ENST00000476517 C1orf167Q5SNV9 1468 aa16.4■□□□□ 0.22
CDKAL1-203ENST00000476517 LRP6O75581 1613 aa16.39■□□□□ 0.21
CDKAL1-203ENST00000476517 DIAPH1O60610 1272 aaKnown RBP16.39■□□□□ 0.21
CDKAL1-203ENST00000476517 NEFLP07196 543 aa16.39■□□□□ 0.21
CDKAL1-203ENST00000476517 ATF3P18847 181 aa16.39■□□□□ 0.21
CDKAL1-203ENST00000476517 MST1RQ04912 1400 aa16.38■□□□□ 0.21
CDKAL1-203ENST00000476517 ESCO1Q5FWF5 840 aa16.38■□□□□ 0.21
CDKAL1-203ENST00000476517 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
CDKAL1-203ENST00000476517 PHLPP1O60346 1717 aa16.38■□□□□ 0.21
CDKAL1-203ENST00000476517 ALS2Q96Q42 1657 aa16.37■□□□□ 0.21
CDKAL1-203ENST00000476517 DSG3P32926 999 aa16.37■□□□□ 0.21
CDKAL1-203ENST00000476517 PNNQ9H307 717 aaKnown RBP16.37■□□□□ 0.21
CDKAL1-203ENST00000476517 POLKQ9UBT6 870 aa16.37■□□□□ 0.21
CDKAL1-203ENST00000476517 PHRF1Q9P1Y6 1649 aaKnown RBP16.37■□□□□ 0.21
CDKAL1-203ENST00000476517 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
CDKAL1-203ENST00000476517 RUNDC1Q96C34 613 aa16.36■□□□□ 0.21
CDKAL1-203ENST00000476517 ZRANB1Q9UGI0 708 aa16.36■□□□□ 0.21
CDKAL1-203ENST00000476517 SPATA31A6Q5VVP1 1343 aa16.36■□□□□ 0.21
CDKAL1-203ENST00000476517 RGPD1P0DJD0 1748 aa16.36■□□□□ 0.21
CDKAL1-203ENST00000476517 COL16A1Q07092 1604 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms