RNA–Protein interactions for RNA: ENST00000476126.1

SP140-209, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-209ENST00000476126 TRPC5Q9UL62 973 aaPredicted RBP9.93□□□□□ -0.82
SP140-209ENST00000476126 SRPK2P78362 688 aaKnown RBP9.92□□□□□ -0.82
SP140-209ENST00000476126 NUDT16Q96DE0 195 aaKnown RBP9.92□□□□□ -0.82
SP140-209ENST00000476126 CDK19Q9BWU1 502 aa9.92□□□□□ -0.82
SP140-209ENST00000476126 GLI3P10071 1580 aa9.92□□□□□ -0.82
SP140-209ENST00000476126 ATRNO75882 1429 aa9.91□□□□□ -0.82
SP140-209ENST00000476126 PPIP5K1Q6PFW1 1433 aa9.91□□□□□ -0.82
SP140-209ENST00000476126 MON2Q7Z3U7 1717 aa9.91□□□□□ -0.82
SP140-209ENST00000476126 CABLES1Q8TDN4 633 aa9.91□□□□□ -0.82
SP140-209ENST00000476126 NRKQ7Z2Y5 1582 aa9.9□□□□□ -0.82
SP140-209ENST00000476126 FNBP4Q8N3X1 1017 aaPredicted RBP9.9□□□□□ -0.82
SP140-209ENST00000476126 SLIT2O94813 1529 aa9.9□□□□□ -0.82
SP140-209ENST00000476126 BCL9LQ86UU0 1499 aa9.9□□□□□ -0.83
SP140-209ENST00000476126 RALGAPBQ86X10 1494 aa9.9□□□□□ -0.83
SP140-209ENST00000476126 RGPD5Q99666 1765 aa9.88□□□□□ -0.83
SP140-209ENST00000476126 ACEP12821 1306 aa9.88□□□□□ -0.83
SP140-209ENST00000476126 PIK3C2AO00443 1686 aa9.88□□□□□ -0.83
SP140-209ENST00000476126 CABP2Q9NPB3 220 aa9.88□□□□□ -0.83
SP140-209ENST00000476126 CCDC9Q9Y3X0 531 aaKnown RBP9.88□□□□□ -0.83
SP140-209ENST00000476126 CCDC61Q9Y6R9 512 aa9.88□□□□□ -0.83
SP140-209ENST00000476126 POLR3AO14802 1390 aaPredicted RBP9.88□□□□□ -0.83
SP140-209ENST00000476126 EVC2Q86UK5 1308 aa9.87□□□□□ -0.83
SP140-209ENST00000476126 UNC5CLQ8IV45 518 aa9.87□□□□□ -0.83
SP140-209ENST00000476126 ATAD2Q6PL18 1390 aa9.87□□□□□ -0.83
SP140-209ENST00000476126 LTN1O94822 1766 aa9.86□□□□□ -0.83
SP140-209ENST00000476126 NBPF8Q3BBV2 869 aa9.86□□□□□ -0.83
SP140-209ENST00000476126 CARD11Q9BXL7 1154 aa9.86□□□□□ -0.83
SP140-209ENST00000476126 WNK3Q9BYP7 1800 aa9.86□□□□□ -0.83
SP140-209ENST00000476126 A0A0G2JS52 829 aa9.85□□□□□ -0.83
SP140-209ENST00000476126 MYT1Q01538 1121 aa9.85□□□□□ -0.83
SP140-209ENST00000476126 NUTM2GQ5VZR2 741 aa9.85□□□□□ -0.83
SP140-209ENST00000476126 GJD4Q96KN9 370 aaPredicted RBP9.85□□□□□ -0.83
SP140-209ENST00000476126 LMO7Q8WWI1 1683 aa9.84□□□□□ -0.83
SP140-209ENST00000476126 USP6P35125 1406 aa9.84□□□□□ -0.83
SP140-209ENST00000476126 PLEKHG3A1L390 1219 aa9.84□□□□□ -0.83
SP140-209ENST00000476126 ABTB2Q8N961 1025 aa9.84□□□□□ -0.83
SP140-209ENST00000476126 UPF1Q92900 1129 aaKnown RBP eCLIP9.84□□□□□ -0.83
SP140-209ENST00000476126 PRDM11Q9NQV5 511 aa9.84□□□□□ -0.83
SP140-209ENST00000476126 BTG4Q9NY30 223 aa9.84□□□□□ -0.83
SP140-209ENST00000476126 RGPD1P0DJD0 1748 aa9.84□□□□□ -0.83
SP140-209ENST00000476126 KIAA0232Q92628 1395 aa9.83□□□□□ -0.84
SP140-209ENST00000476126 SBNO2Q9Y2G9 1366 aa9.83□□□□□ -0.84
SP140-209ENST00000476126 USP54Q70EL1 1684 aa9.83□□□□□ -0.84
SP140-209ENST00000476126 THSD7AQ9UPZ6 1657 aa9.83□□□□□ -0.84
SP140-209ENST00000476126 EP400Q96L91 3159 aa9.82□□□□□ -0.84
SP140-209ENST00000476126 FAM83GA6ND36 823 aa9.82□□□□□ -0.84
SP140-209ENST00000476126 VPS72Q15906 364 aa9.82□□□□□ -0.84
SP140-209ENST00000476126 PCGF6Q9BYE7 350 aa9.82□□□□□ -0.84
SP140-209ENST00000476126 CABP1Q9NZU7 370 aa9.82□□□□□ -0.84
SP140-209ENST00000476126 BRD4O60885 1362 aaPredicted RBP9.82□□□□□ -0.84
SP140-209ENST00000476126 KIF20BQ96Q89 1820 aa9.82□□□□□ -0.84
SP140-209ENST00000476126 SLIT3O75094 1523 aa9.82□□□□□ -0.84
SP140-209ENST00000476126 ZBTB7CA1YPR0 619 aa9.81□□□□□ -0.84
SP140-209ENST00000476126 ZC3H6P61129 1189 aaKnown RBP9.81□□□□□ -0.84
SP140-209ENST00000476126 PPP4R3CPQ6ZMV5 832 aa9.81□□□□□ -0.84
SP140-209ENST00000476126 NLRP13Q86W25 1043 aa9.81□□□□□ -0.84
SP140-209ENST00000476126 PARP4Q9UKK3 1724 aaKnown RBP9.8□□□□□ -0.84
SP140-209ENST00000476126 CHRNA2Q15822 529 aa9.8□□□□□ -0.84
SP140-209ENST00000476126 STRN4Q9NRL3 753 aa9.8□□□□□ -0.84
SP140-209ENST00000476126 COL18A1P39060 1754 aa9.8□□□□□ -0.84
SP140-209ENST00000476126 TNS1Q9HBL0 1735 aaKnown RBP9.79□□□□□ -0.84
SP140-209ENST00000476126 KTN1Q86UP2 1357 aaKnown RBP9.79□□□□□ -0.84
SP140-209ENST00000476126 CAMTA1Q9Y6Y1 1673 aa9.79□□□□□ -0.84
SP140-209ENST00000476126 USP19O94966 1318 aa9.79□□□□□ -0.84
SP140-209ENST00000476126 NLRP6P59044 892 aa9.78□□□□□ -0.84
SP140-209ENST00000476126 FAM98CQ17RN3 349 aaKnown RBP9.78□□□□□ -0.84
SP140-209ENST00000476126 SEPT12Q8IYM1 358 aa9.78□□□□□ -0.84
SP140-209ENST00000476126 TMC1Q8TDI8 760 aa9.78□□□□□ -0.84
SP140-209ENST00000476126 MYOM1P52179 1685 aa9.77□□□□□ -0.84
SP140-209ENST00000476126 CPDO75976 1380 aa9.77□□□□□ -0.84
SP140-209ENST00000476126 SSH2Q76I76 1423 aa9.77□□□□□ -0.85
SP140-209ENST00000476126 EVA1CP58658 441 aa9.77□□□□□ -0.85
SP140-209ENST00000476126 ZNF692Q9BU19 519 aaPredicted RBP9.77□□□□□ -0.85
SP140-209ENST00000476126 LRRC37A3O60309 1634 aa9.77□□□□□ -0.85
SP140-209ENST00000476126 TTC21AQ8NDW8 1320 aa9.77□□□□□ -0.85
SP140-209ENST00000476126 SBF2Q86WG5 1849 aa9.77□□□□□ -0.85
SP140-209ENST00000476126 FAM208AQ9UK61 1670 aaKnown RBP9.77□□□□□ -0.85
SP140-209ENST00000476126 USP47Q96K76 1375 aa9.76□□□□□ -0.85
SP140-209ENST00000476126 CPSF1Q10570 1443 aaKnown RBP9.76□□□□□ -0.85
SP140-209ENST00000476126 SOX12O15370 315 aa9.76□□□□□ -0.85
SP140-209ENST00000476126 GCP02774 474 aa9.76□□□□□ -0.85
SP140-209ENST00000476126 SF3B2Q13435 895 aaKnown RBP9.76□□□□□ -0.85
SP140-209ENST00000476126 KRT27Q7Z3Y8 459 aa9.76□□□□□ -0.85
SP140-209ENST00000476126 HDGFL2Q7Z4V5 671 aaPredicted RBP9.76□□□□□ -0.85
SP140-209ENST00000476126 USP35Q9P2H5 1018 aa9.76□□□□□ -0.85
SP140-209ENST00000476126 COL5A2P05997 1499 aaPredicted RBP9.76□□□□□ -0.85
SP140-209ENST00000476126 SPATA31A5Q5VU36 1347 aa9.76□□□□□ -0.85
SP140-209ENST00000476126 TTC21BQ7Z4L5 1316 aa9.76□□□□□ -0.85
SP140-209ENST00000476126 SPATA31A7Q8IWB4 1347 aa9.76□□□□□ -0.85
SP140-209ENST00000476126 CLSPNQ9HAW4 1339 aa9.76□□□□□ -0.85
SP140-209ENST00000476126 BLMP54132 1417 aaPredicted RBP9.75□□□□□ -0.85
SP140-209ENST00000476126 CD163L1Q9NR16 1453 aa9.75□□□□□ -0.85
SP140-209ENST00000476126 ST20-MTHFSA0A0A6YYL1 179 aa9.75□□□□□ -0.85
SP140-209ENST00000476126 NFAT5O94916 1531 aa9.75□□□□□ -0.85
SP140-209ENST00000476126 SPATA31A1Q5TZJ5 1347 aa9.75□□□□□ -0.85
SP140-209ENST00000476126 EDC4Q6P2E9 1401 aaKnown RBP9.74□□□□□ -0.85
SP140-209ENST00000476126 RGPD2P0DJD1 1756 aa9.74□□□□□ -0.85
SP140-209ENST00000476126 ABCC6O95255 1503 aa9.74□□□□□ -0.85
SP140-209ENST00000476126 CCDC125Q86Z20 511 aa9.74□□□□□ -0.85
SP140-209ENST00000476126 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms