RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
SEMA3C-208ENST00000475955 RBM6P78332 1123 aaKnown RBP13.38□□□□□ -0.27
SEMA3C-208ENST00000475955 LMOD2Q6P5Q4 547 aa13.38□□□□□ -0.27
SEMA3C-208ENST00000475955 NWD2Q9ULI1 1742 aa13.38□□□□□ -0.27
SEMA3C-208ENST00000475955 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
SEMA3C-208ENST00000475955 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
SEMA3C-208ENST00000475955 BRWD3Q6RI45 1802 aa13.36□□□□□ -0.27
SEMA3C-208ENST00000475955 NRAPQ86VF7 1730 aa13.36□□□□□ -0.27
SEMA3C-208ENST00000475955 POLR3AO14802 1390 aaPredicted RBP13.36□□□□□ -0.27
SEMA3C-208ENST00000475955 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
SEMA3C-208ENST00000475955 TRPC5Q9UL62 973 aaPredicted RBP13.36□□□□□ -0.27
SEMA3C-208ENST00000475955 GLI3P10071 1580 aa13.36□□□□□ -0.27
SEMA3C-208ENST00000475955 ACEP12821 1306 aa13.36□□□□□ -0.27
SEMA3C-208ENST00000475955 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
SEMA3C-208ENST00000475955 ROCK2O75116 1388 aaKnown RBP13.35□□□□□ -0.27
SEMA3C-208ENST00000475955 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
SEMA3C-208ENST00000475955 CABP2Q9NPB3 220 aa13.35□□□□□ -0.27
SEMA3C-208ENST00000475955 CCDC61Q9Y6R9 512 aa13.35□□□□□ -0.27
SEMA3C-208ENST00000475955 FAM83GA6ND36 823 aa13.34□□□□□ -0.27
SEMA3C-208ENST00000475955 UPF1Q92900 1129 aaKnown RBP eCLIP13.34□□□□□ -0.27
SEMA3C-208ENST00000475955 PPIP5K1Q6PFW1 1433 aa13.33□□□□□ -0.28
SEMA3C-208ENST00000475955 UNC5CLQ8IV45 518 aa13.33□□□□□ -0.28
SEMA3C-208ENST00000475955 AKAP12Q02952 1782 aa13.32□□□□□ -0.28
SEMA3C-208ENST00000475955 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
SEMA3C-208ENST00000475955 RALGAPBQ86X10 1494 aa13.32□□□□□ -0.28
SEMA3C-208ENST00000475955 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
SEMA3C-208ENST00000475955 SRPK2P78362 688 aaKnown RBP13.32□□□□□ -0.28
SEMA3C-208ENST00000475955 TONSLQ96HA7 1378 aa13.32□□□□□ -0.28
SEMA3C-208ENST00000475955 HAP1P54257 671 aaPredicted RBP13.31□□□□□ -0.28
SEMA3C-208ENST00000475955 GJD4Q96KN9 370 aaPredicted RBP13.31□□□□□ -0.28
SEMA3C-208ENST00000475955 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
SEMA3C-208ENST00000475955 NUTM2GQ5VZR2 741 aa13.3□□□□□ -0.28
SEMA3C-208ENST00000475955 SUPT16HQ9Y5B9 1047 aaKnown RBP13.3□□□□□ -0.28
SEMA3C-208ENST00000475955 CABP1Q9NZU7 370 aa13.29□□□□□ -0.28
SEMA3C-208ENST00000475955 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
SEMA3C-208ENST00000475955 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
SEMA3C-208ENST00000475955 EVC2Q86UK5 1308 aa13.28□□□□□ -0.28
SEMA3C-208ENST00000475955 SSH2Q76I76 1423 aa13.28□□□□□ -0.28
SEMA3C-208ENST00000475955 EP400Q96L91 3159 aa13.28□□□□□ -0.28
SEMA3C-208ENST00000475955 VPS72Q15906 364 aa13.27□□□□□ -0.29
SEMA3C-208ENST00000475955 CARD11Q9BXL7 1154 aa13.27□□□□□ -0.29
SEMA3C-208ENST00000475955 USP6P35125 1406 aa13.27□□□□□ -0.29
SEMA3C-208ENST00000475955 MON2Q7Z3U7 1717 aa13.26□□□□□ -0.29
SEMA3C-208ENST00000475955 BTG4Q9NY30 223 aa13.26□□□□□ -0.29
SEMA3C-208ENST00000475955 LMO7Q8WWI1 1683 aa13.25□□□□□ -0.29
SEMA3C-208ENST00000475955 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
SEMA3C-208ENST00000475955 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
SEMA3C-208ENST00000475955 USP19O94966 1318 aa13.25□□□□□ -0.29
SEMA3C-208ENST00000475955 ABTB2Q8N961 1025 aa13.25□□□□□ -0.29
SEMA3C-208ENST00000475955 ZC3H6P61129 1189 aaKnown RBP13.24□□□□□ -0.29
SEMA3C-208ENST00000475955 CHRNA2Q15822 529 aa13.24□□□□□ -0.29
SEMA3C-208ENST00000475955 RGPD5Q99666 1765 aa13.24□□□□□ -0.29
SEMA3C-208ENST00000475955 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
SEMA3C-208ENST00000475955 COL18A1P39060 1754 aa13.23□□□□□ -0.29
SEMA3C-208ENST00000475955 ONECUT3O60422 494 aaPredicted RBP13.23□□□□□ -0.29
SEMA3C-208ENST00000475955 PRDM11Q9NQV5 511 aa13.23□□□□□ -0.29
SEMA3C-208ENST00000475955 CAMTA1Q9Y6Y1 1673 aa13.23□□□□□ -0.29
SEMA3C-208ENST00000475955 SLIT3O75094 1523 aa13.23□□□□□ -0.29
SEMA3C-208ENST00000475955 CD163L1Q9NR16 1453 aa13.23□□□□□ -0.29
SEMA3C-208ENST00000475955 ATAD2Q6PL18 1390 aa13.22□□□□□ -0.29
SEMA3C-208ENST00000475955 SEPT12Q8IYM1 358 aa13.22□□□□□ -0.29
SEMA3C-208ENST00000475955 THSD7AQ9UPZ6 1657 aa13.21□□□□□ -0.29
SEMA3C-208ENST00000475955 BRD4O60885 1362 aaPredicted RBP13.21□□□□□ -0.29
SEMA3C-208ENST00000475955 ANP32CO43423 234 aa13.21□□□□□ -0.29
SEMA3C-208ENST00000475955 TESK2Q96S53 571 aa13.21□□□□□ -0.29
SEMA3C-208ENST00000475955 CCDC9Q9Y3X0 531 aaKnown RBP13.21□□□□□ -0.29
SEMA3C-208ENST00000475955 CPDO75976 1380 aa13.2□□□□□ -0.3
SEMA3C-208ENST00000475955 SPATA31A5Q5VU36 1347 aa13.2□□□□□ -0.3
SEMA3C-208ENST00000475955 SPATA31A7Q8IWB4 1347 aa13.2□□□□□ -0.3
SEMA3C-208ENST00000475955 GCP02774 474 aa13.2□□□□□ -0.3
SEMA3C-208ENST00000475955 NEFLP07196 543 aa13.2□□□□□ -0.3
SEMA3C-208ENST00000475955 NLRP13Q86W25 1043 aa13.2□□□□□ -0.3
SEMA3C-208ENST00000475955 TTC21BQ7Z4L5 1316 aa13.19□□□□□ -0.3
SEMA3C-208ENST00000475955 USP54Q70EL1 1684 aa13.19□□□□□ -0.3
SEMA3C-208ENST00000475955 ST20-MTHFSA0A0A6YYL1 179 aa13.19□□□□□ -0.3
SEMA3C-208ENST00000475955 FAM98CQ17RN3 349 aaKnown RBP13.19□□□□□ -0.3
SEMA3C-208ENST00000475955 NLRP6P59044 892 aa13.18□□□□□ -0.3
SEMA3C-208ENST00000475955 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
SEMA3C-208ENST00000475955 SLC12A5Q9H2X9 1139 aa13.18□□□□□ -0.3
SEMA3C-208ENST00000475955 KTN1Q86UP2 1357 aaKnown RBP13.18□□□□□ -0.3
SEMA3C-208ENST00000475955 SPATA31A1Q5TZJ5 1347 aa13.17□□□□□ -0.3
SEMA3C-208ENST00000475955 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
SEMA3C-208ENST00000475955 ZRANB1Q9UGI0 708 aa13.17□□□□□ -0.3
SEMA3C-208ENST00000475955 DDX10Q13206 875 aaKnown RBP13.16□□□□□ -0.3
SEMA3C-208ENST00000475955 NFAT5O94916 1531 aa13.16□□□□□ -0.3
SEMA3C-208ENST00000475955 LTN1O94822 1766 aa13.15□□□□□ -0.3
SEMA3C-208ENST00000475955 LARP1Q6PKG0 1096 aaKnown RBP13.15□□□□□ -0.3
SEMA3C-208ENST00000475955 KRT27Q7Z3Y8 459 aa13.15□□□□□ -0.3
SEMA3C-208ENST00000475955 COL5A2P05997 1499 aaPredicted RBP13.15□□□□□ -0.3
SEMA3C-208ENST00000475955 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
SEMA3C-208ENST00000475955 WNK3Q9BYP7 1800 aa13.14□□□□□ -0.31
SEMA3C-208ENST00000475955 FAM182BQ5T319 152 aa13.14□□□□□ -0.31
SEMA3C-208ENST00000475955 TMC1Q8TDI8 760 aa13.14□□□□□ -0.31
SEMA3C-208ENST00000475955 PUS7Q96PZ0 661 aaKnown RBP13.14□□□□□ -0.31
SEMA3C-208ENST00000475955 A0A1W2PP64 1363 aa13.14□□□□□ -0.31
SEMA3C-208ENST00000475955 USP47Q96K76 1375 aa13.14□□□□□ -0.31
SEMA3C-208ENST00000475955 AATKQ6ZMQ8 1374 aa13.13□□□□□ -0.31
SEMA3C-208ENST00000475955 NME9Q86XW9 330 aa13.13□□□□□ -0.31
SEMA3C-208ENST00000475955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.13□□□□□ -0.31
SEMA3C-208ENST00000475955 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms