RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 PTMSP20962 102 aa11.73□□□□□ -0.53
CDH23-211ENST00000475158 CEBPAP49715 358 aaPredicted RBP11.73□□□□□ -0.53
CDH23-211ENST00000475158 MPNDQ8N594 471 aa11.73□□□□□ -0.53
CDH23-211ENST00000475158 IL1RAPL2Q9NP60 686 aa11.73□□□□□ -0.53
CDH23-211ENST00000475158 DUSP27Q5VZP5 1158 aa11.72□□□□□ -0.53
CDH23-211ENST00000475158 SIL1Q9H173 461 aa11.72□□□□□ -0.53
CDH23-211ENST00000475158 WDR63Q8IWG1 891 aa11.71□□□□□ -0.53
CDH23-211ENST00000475158 NUDT16Q96DE0 195 aaKnown RBP11.71□□□□□ -0.53
CDH23-211ENST00000475158 RTEL1-TNFRSF6BF6WH68 1400 aa11.71□□□□□ -0.53
CDH23-211ENST00000475158 DDX58O95786 925 aaKnown RBP11.71□□□□□ -0.53
CDH23-211ENST00000475158 RARSP54136 660 aaKnown RBP11.71□□□□□ -0.53
CDH23-211ENST00000475158 CCDC27Q2M243 656 aa11.71□□□□□ -0.53
CDH23-211ENST00000475158 EXOC6BQ9Y2D4 811 aa11.71□□□□□ -0.53
CDH23-211ENST00000475158 UNC13AQ9UPW8 1703 aa11.71□□□□□ -0.54
CDH23-211ENST00000475158 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.54
CDH23-211ENST00000475158 HTATSF1O43719 755 aaKnown RBP11.71□□□□□ -0.54
CDH23-211ENST00000475158 TRAK2O60296 914 aa11.71□□□□□ -0.54
CDH23-211ENST00000475158 RASSF8Q8NHQ8 419 aa11.71□□□□□ -0.54
CDH23-211ENST00000475158 PRDM10Q9NQV6 1147 aa11.71□□□□□ -0.54
CDH23-211ENST00000475158 ATF3P18847 181 aa11.7□□□□□ -0.54
CDH23-211ENST00000475158 ZC3H6P61129 1189 aaKnown RBP11.7□□□□□ -0.54
CDH23-211ENST00000475158 USHBP1Q8N6Y0 703 aa11.7□□□□□ -0.54
CDH23-211ENST00000475158 RUFY2Q8WXA3 655 aa11.7□□□□□ -0.54
CDH23-211ENST00000475158 ZHX1Q9UKY1 873 aaPredicted RBP11.7□□□□□ -0.54
CDH23-211ENST00000475158 PROSER2Q86WR7 435 aaPredicted RBP11.7□□□□□ -0.54
CDH23-211ENST00000475158 CLSTN1O94985 981 aa11.69□□□□□ -0.54
CDH23-211ENST00000475158 CLASRPQ8N2M8 674 aaKnown RBP11.69□□□□□ -0.54
CDH23-211ENST00000475158 STRN4Q9NRL3 753 aa11.69□□□□□ -0.54
CDH23-211ENST00000475158 F6X3S4 739 aa11.69□□□□□ -0.54
CDH23-211ENST00000475158 CCDC30Q5VVM6 783 aa11.69□□□□□ -0.54
CDH23-211ENST00000475158 CAVIN1Q6NZI2 390 aaKnown RBP11.69□□□□□ -0.54
CDH23-211ENST00000475158 SMC3Q9UQE7 1217 aa11.69□□□□□ -0.54
CDH23-211ENST00000475158 ZNF530Q6P9A1 599 aaPredicted RBP11.69□□□□□ -0.54
CDH23-211ENST00000475158 FAM83GA6ND36 823 aa11.68□□□□□ -0.54
CDH23-211ENST00000475158 SMARCA5O60264 1052 aaPredicted RBP11.68□□□□□ -0.54
CDH23-211ENST00000475158 TPM2P07951 284 aa11.68□□□□□ -0.54
CDH23-211ENST00000475158 MYL6BP14649 208 aa11.68□□□□□ -0.54
CDH23-211ENST00000475158 GAS2L2Q8NHY3 880 aa11.68□□□□□ -0.54
CDH23-211ENST00000475158 GPATCH8Q9UKJ3 1502 aaKnown RBP11.68□□□□□ -0.54
CDH23-211ENST00000475158 PEG3Q9GZU2 1588 aa11.68□□□□□ -0.54
CDH23-211ENST00000475158 MAP3K1Q13233 1512 aa11.68□□□□□ -0.54
CDH23-211ENST00000475158 CHD1LQ86WJ1 897 aa11.68□□□□□ -0.54
CDH23-211ENST00000475158 BICD2Q8TD16 824 aa11.68□□□□□ -0.54
CDH23-211ENST00000475158 GNAI3P08754 354 aa11.67□□□□□ -0.54
CDH23-211ENST00000475158 TNNQ9UQP3 1299 aa11.67□□□□□ -0.54
CDH23-211ENST00000475158 SKOR2Q2VWA4 1001 aaPredicted RBP11.67□□□□□ -0.54
CDH23-211ENST00000475158 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.67□□□□□ -0.54
CDH23-211ENST00000475158 BBXQ8WY36 941 aaPredicted RBP11.67□□□□□ -0.54
CDH23-211ENST00000475158 DNAJC2Q99543 621 aaKnown RBP11.67□□□□□ -0.54
CDH23-211ENST00000475158 FSD1Q9BTV5 496 aa11.67□□□□□ -0.54
CDH23-211ENST00000475158 PRPF40AO75400 957 aaKnown RBP11.67□□□□□ -0.54
CDH23-211ENST00000475158 FCHSD2O94868 740 aa11.67□□□□□ -0.54
CDH23-211ENST00000475158 IGHDP01880 384 aa11.67□□□□□ -0.54
CDH23-211ENST00000475158 GNAI2P04899 355 aa11.67□□□□□ -0.54
CDH23-211ENST00000475158 WASHC4Q2M389 1173 aa11.67□□□□□ -0.54
CDH23-211ENST00000475158 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
CDH23-211ENST00000475158 BECN2A8MW95 431 aa11.67□□□□□ -0.54
CDH23-211ENST00000475158 NFE2L2Q16236 605 aa11.67□□□□□ -0.54
CDH23-211ENST00000475158 ESPNB1AK53 854 aa11.66□□□□□ -0.54
CDH23-211ENST00000475158 CPLX1O14810 134 aa11.66□□□□□ -0.54
CDH23-211ENST00000475158 DDX54Q8TDD1 881 aaKnown RBP11.66□□□□□ -0.54
CDH23-211ENST00000475158 MAP7D2Q96T17 732 aa11.66□□□□□ -0.54
CDH23-211ENST00000475158 BIVM-ERCC5R4GMW8 1640 aa11.66□□□□□ -0.54
CDH23-211ENST00000475158 PES1O00541 588 aaKnown RBP11.66□□□□□ -0.54
CDH23-211ENST00000475158 CCDC85AQ96PX6 553 aaPredicted RBP11.66□□□□□ -0.54
CDH23-211ENST00000475158 CD109Q6YHK3 1445 aa11.66□□□□□ -0.54
CDH23-211ENST00000475158 PHF14O94880 888 aa11.66□□□□□ -0.54
CDH23-211ENST00000475158 CSPP1Q1MSJ5 1256 aa11.66□□□□□ -0.54
CDH23-211ENST00000475158 ATP6V1DQ9Y5K8 247 aa11.66□□□□□ -0.54
CDH23-211ENST00000475158 NOS1P29475 1434 aa11.65□□□□□ -0.54
CDH23-211ENST00000475158 TRIM27P14373 513 aa11.65□□□□□ -0.54
CDH23-211ENST00000475158 MRE11P49959 708 aa11.65□□□□□ -0.54
CDH23-211ENST00000475158 NUCB2P80303 420 aa11.65□□□□□ -0.54
CDH23-211ENST00000475158 FIBPO43427 364 aa11.65□□□□□ -0.54
CDH23-211ENST00000475158 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.54
CDH23-211ENST00000475158 CUL7Q14999 1698 aa11.65□□□□□ -0.54
CDH23-211ENST00000475158 SRGAP3O43295 1099 aa11.65□□□□□ -0.55
CDH23-211ENST00000475158 GCC1Q96CN9 775 aa11.65□□□□□ -0.55
CDH23-211ENST00000475158 ADGRL1O94910 1474 aa11.64□□□□□ -0.55
CDH23-211ENST00000475158 ERC2O15083 957 aa11.64□□□□□ -0.55
CDH23-211ENST00000475158 RAD21O60216 631 aa11.64□□□□□ -0.55
CDH23-211ENST00000475158 AAMPQ13685 434 aa11.64□□□□□ -0.55
CDH23-211ENST00000475158 UPF3BQ9BZI7 483 aaKnown RBP11.64□□□□□ -0.55
CDH23-211ENST00000475158 KIF3AQ9Y496 699 aa11.64□□□□□ -0.55
CDH23-211ENST00000475158 ZNF592Q92610 1267 aa11.64□□□□□ -0.55
CDH23-211ENST00000475158 GOLGA6L19H0YKK7 550 aa11.64□□□□□ -0.55
CDH23-211ENST00000475158 FOXO3O43524 673 aa11.64□□□□□ -0.55
CDH23-211ENST00000475158 THEMISQ8N1K5 641 aaPredicted RBP11.64□□□□□ -0.55
CDH23-211ENST00000475158 RBM42Q9BTD8 480 aaKnown RBP11.64□□□□□ -0.55
CDH23-211ENST00000475158 GPRASP1Q5JY77 1395 aa11.64□□□□□ -0.55
CDH23-211ENST00000475158 ATAD2Q6PL18 1390 aa11.64□□□□□ -0.55
CDH23-211ENST00000475158 CEBPZQ03701 1054 aaKnown RBP11.63□□□□□ -0.55
CDH23-211ENST00000475158 MTMR7Q9Y216 660 aa11.63□□□□□ -0.55
CDH23-211ENST00000475158 FYB1O15117 783 aa11.63□□□□□ -0.55
CDH23-211ENST00000475158 RNF20Q5VTR2 975 aa11.63□□□□□ -0.55
CDH23-211ENST00000475158 STK11IPQ8N1F8 1099 aa11.63□□□□□ -0.55
CDH23-211ENST00000475158 KAT6BQ8WYB5 2073 aa11.63□□□□□ -0.55
CDH23-211ENST00000475158 STK3Q13188 491 aa11.63□□□□□ -0.55
CDH23-211ENST00000475158 PLEKHO1Q53GL0 409 aaPredicted RBP11.63□□□□□ -0.55
CDH23-211ENST00000475158 HSP90AB4PQ58FF6 505 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms