RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CFAP69A5D8W1 941 aa6.15□□□□□ -1.42
NPHP3-206ENST00000474871 ERCC3P19447 782 aa6.15□□□□□ -1.42
NPHP3-206ENST00000474871 CDK13Q14004 1512 aaKnown RBP6.15□□□□□ -1.42
NPHP3-206ENST00000474871 NCOA2Q15596 1464 aa6.15□□□□□ -1.42
NPHP3-206ENST00000474871 SYNRGQ9UMZ2 1314 aa6.15□□□□□ -1.43
NPHP3-206ENST00000474871 TERF1P54274 439 aa6.15□□□□□ -1.43
NPHP3-206ENST00000474871 CCDC82Q8N4S0 544 aa6.15□□□□□ -1.43
NPHP3-206ENST00000474871 RNF39Q9H2S5 420 aa6.15□□□□□ -1.43
NPHP3-206ENST00000474871 MAP4K4O95819 1239 aaPredicted RBP6.14□□□□□ -1.43
NPHP3-206ENST00000474871 NUP153P49790 1475 aaKnown RBP6.14□□□□□ -1.43
NPHP3-206ENST00000474871 SHROOM2Q13796 1616 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 FSD2A1L4K1 749 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 BDNFP23560 247 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 SUN2Q9UH99 717 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.14□□□□□ -1.43
NPHP3-206ENST00000474871 LMOD3Q0VAK6 560 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 DONSONQ9NYP3 566 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 RBM27Q9P2N5 1060 aaKnown RBP6.14□□□□□ -1.43
NPHP3-206ENST00000474871 ZNF232Q9UNY5 417 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 MTUS2Q5JR59 1369 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 ABCB7O75027 752 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 GYS2P54840 703 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 HDAC1Q13547 482 aaPredicted RBP6.13□□□□□ -1.43
NPHP3-206ENST00000474871 FGD6Q6ZV73 1430 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 APBB1O00213 710 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 NEXNQ0ZGT2 675 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 SYNPO2Q9UMS6 1093 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 ALDH1B1P30837 517 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 LONRF3Q496Y0 759 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 GPATCH3Q96I76 525 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 MYOM3Q5VTT5 1437 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 ZKSCAN2Q63HK3 967 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 NLRP13Q86W25 1043 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 PTPN23Q9H3S7 1636 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 SLC27A2O14975 620 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 KCNN1Q92952 543 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 EFCC1Q9HA90 598 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 ABCA8O94911 1581 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 CARMIL2Q6F5E8 1435 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 DNTTIP2Q5QJE6 756 aaKnown RBP6.12□□□□□ -1.43
NPHP3-206ENST00000474871 GZF1Q9H116 711 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-206ENST00000474871 ARIH1Q9Y4X5 557 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-206ENST00000474871 ADCY10Q96PN6 1610 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 TCOF1Q13428 1488 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 PAX3P23760 479 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 DHX57Q6P158 1386 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 ESPNB1AK53 854 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 VASPP50552 380 aaPredicted RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 MAP9Q49MG5 647 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 SNRNP27Q8WVK2 155 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 NCAPGQ9BPX3 1015 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 PLB1Q6P1J6 1458 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 RBM6P78332 1123 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 NOL8Q76FK4 1167 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 MAP7D2Q96T17 732 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 PNNQ9H307 717 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 FAM210AQ96ND0 272 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 AGAP3Q96P47 875 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 RIMBP3CA6NJZ7 1639 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 RIMBP3BA6NNM3 1639 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 RIMBP3Q9UFD9 1639 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 SF3B2Q13435 895 aaKnown RBP6.1□□□□□ -1.43
NPHP3-206ENST00000474871 TMCO4Q5TGY1 634 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 BARGINQ6ZT62 677 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 TATDN2Q93075 761 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 PNMA2Q9UL42 364 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 CLASP1Q7Z460 1538 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 GSCP56915 257 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-206ENST00000474871 NFATC2IPQ8NCF5 419 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 MICAL1Q8TDZ2 1067 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 SF3A1Q15459 793 aaKnown RBP6.09□□□□□ -1.43
NPHP3-206ENST00000474871 PMM1Q92871 262 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 NRDCO43847 1150 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 RAB11FIP3O75154 756 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 PTK7Q13308 1070 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 JPH4Q96JJ6 628 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 KCNH8Q96L42 1107 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 MYH16Q9H6N6 1097 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 SETD5Q9C0A6 1442 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 RAB3GAP2Q9H2M9 1393 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 GOLGA6L3A6NEY3 463 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 JMYQ8N9B5 988 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 PRG4Q92954 1404 aaPredicted RBP6.09□□□□□ -1.43
NPHP3-206ENST00000474871 RBM26Q5T8P6 1007 aaKnown RBP6.09□□□□□ -1.44
NPHP3-206ENST00000474871 TRIM52Q96A61 297 aa6.09□□□□□ -1.44
NPHP3-206ENST00000474871 TSPYL2Q9H2G4 693 aaPredicted RBP6.09□□□□□ -1.44
NPHP3-206ENST00000474871 PDZRN3Q9UPQ7 1066 aa6.09□□□□□ -1.44
NPHP3-206ENST00000474871 RGL2O15211 777 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 TNPO1Q92973 898 aaKnown RBP6.08□□□□□ -1.44
NPHP3-206ENST00000474871 STAG3Q9UJ98 1225 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 PCDHGA4Q9Y5G9 962 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 ITSN2Q9NZM3 1697 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 ZBED9Q6R2W3 1325 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 KIF14Q15058 1648 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 NAT2P11245 290 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 IFT88Q13099 833 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 DZIP3Q86Y13 1208 aaKnown RBP6.08□□□□□ -1.44
NPHP3-206ENST00000474871 CDCA7Q9BWT1 371 aaPredicted RBP6.08□□□□□ -1.44
NPHP3-206ENST00000474871 MAPKBP1O60336 1514 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 GCC2Q8IWJ2 1684 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms