RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 SAFB2Q14151 953 aaKnown RBP eCLIP22.08■■□□□ 1.13
PCCB-212ENST00000474833 DHX57Q6P158 1386 aaKnown RBP22.08■■□□□ 1.12
PCCB-212ENST00000474833 R3HDM1Q15032 1099 aaKnown RBP22.06■■□□□ 1.12
PCCB-212ENST00000474833 PRR36Q9H6K5 1346 aa22.06■■□□□ 1.12
PCCB-212ENST00000474833 TULP4Q9NRJ4 1543 aa22.04■■□□□ 1.12
PCCB-212ENST00000474833 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
PCCB-212ENST00000474833 RREB1Q92766 1687 aa22.01■■□□□ 1.11
PCCB-212ENST00000474833 EZH2Q15910 746 aaKnown RBP22■■□□□ 1.11
PCCB-212ENST00000474833 PHRF1Q9P1Y6 1649 aaKnown RBP21.99■■□□□ 1.11
PCCB-212ENST00000474833 CAMKK2Q96RR4 588 aa21.99■■□□□ 1.11
PCCB-212ENST00000474833 GPRASP1Q5JY77 1395 aa21.99■■□□□ 1.11
PCCB-212ENST00000474833 HIRIP3Q9BW71 556 aaPredicted RBP21.98■■□□□ 1.11
PCCB-212ENST00000474833 SPATA31A1Q5TZJ5 1347 aa21.98■■□□□ 1.11
PCCB-212ENST00000474833 NUP188Q5SRE5 1749 aa21.97■■□□□ 1.11
PCCB-212ENST00000474833 POGKQ9P215 609 aa21.97■■□□□ 1.11
PCCB-212ENST00000474833 PRDM11Q9NQV5 511 aa21.95■■□□□ 1.1
PCCB-212ENST00000474833 EIF3AQ14152 1382 aaKnown RBP21.95■■□□□ 1.1
PCCB-212ENST00000474833 PARD3Q8TEW0 1356 aa21.95■■□□□ 1.1
PCCB-212ENST00000474833 KIAA0232Q92628 1395 aa21.95■■□□□ 1.1
PCCB-212ENST00000474833 ATP7BP35670 1465 aa21.95■■□□□ 1.1
PCCB-212ENST00000474833 MINK1Q8N4C8 1332 aaPredicted RBP21.94■■□□□ 1.1
PCCB-212ENST00000474833 TRIM37O94972 964 aa21.93■■□□□ 1.1
PCCB-212ENST00000474833 WASLO00401 505 aaPredicted RBP21.92■■□□□ 1.1
PCCB-212ENST00000474833 TRAK1Q9UPV9 953 aa21.92■■□□□ 1.1
PCCB-212ENST00000474833 ITSN1Q15811 1721 aa21.92■■□□□ 1.1
PCCB-212ENST00000474833 FAM196AQ6ZSG2 479 aa21.91■■□□□ 1.1
PCCB-212ENST00000474833 ARHGEF28Q8N1W1 1705 aaKnown RBP21.9■■□□□ 1.1
PCCB-212ENST00000474833 CHRNA2Q15822 529 aa21.9■■□□□ 1.1
PCCB-212ENST00000474833 NRKQ7Z2Y5 1582 aa21.9■■□□□ 1.1
PCCB-212ENST00000474833 LMO7Q8WWI1 1683 aa21.89■■□□□ 1.1
PCCB-212ENST00000474833 SSH2Q76I76 1423 aa21.89■■□□□ 1.09
PCCB-212ENST00000474833 TOPAZ1Q8N9V7 1692 aa21.88■■□□□ 1.09
PCCB-212ENST00000474833 PAK3O75914 559 aaPredicted RBP21.87■■□□□ 1.09
PCCB-212ENST00000474833 APBA3O96018 575 aa21.87■■□□□ 1.09
PCCB-212ENST00000474833 NGDNQ8NEJ9 315 aaKnown RBP21.87■■□□□ 1.09
PCCB-212ENST00000474833 CAMTA1Q9Y6Y1 1673 aa21.87■■□□□ 1.09
PCCB-212ENST00000474833 BARGINQ6ZT62 677 aa21.85■■□□□ 1.09
PCCB-212ENST00000474833 STRN4Q9NRL3 753 aa21.85■■□□□ 1.09
PCCB-212ENST00000474833 UTRNP46939 3433 aa21.84■■□□□ 1.09
PCCB-212ENST00000474833 POLR3AO14802 1390 aaPredicted RBP21.83■■□□□ 1.08
PCCB-212ENST00000474833 ZC3H6P61129 1189 aaKnown RBP21.82■■□□□ 1.08
PCCB-212ENST00000474833 PARP4Q9UKK3 1724 aaKnown RBP21.82■■□□□ 1.08
PCCB-212ENST00000474833 PEAK1Q9H792 1746 aa21.81■■□□□ 1.08
PCCB-212ENST00000474833 YY1P25490 414 aa21.81■■□□□ 1.08
PCCB-212ENST00000474833 NUDT16Q96DE0 195 aaKnown RBP21.81■■□□□ 1.08
PCCB-212ENST00000474833 USP35Q9P2H5 1018 aa21.81■■□□□ 1.08
PCCB-212ENST00000474833 CPDO75976 1380 aa21.8■■□□□ 1.08
PCCB-212ENST00000474833 LARP1Q6PKG0 1096 aaKnown RBP21.8■■□□□ 1.08
PCCB-212ENST00000474833 NUTM2GQ5VZR2 741 aa21.79■■□□□ 1.08
PCCB-212ENST00000474833 RGPD3A6NKT7 1758 aaPredicted RBP21.79■■□□□ 1.08
PCCB-212ENST00000474833 RGPD4Q7Z3J3 1758 aa21.79■■□□□ 1.08
PCCB-212ENST00000474833 USP19O94966 1318 aa21.78■■□□□ 1.08
PCCB-212ENST00000474833 COL5A2P05997 1499 aaPredicted RBP21.77■■□□□ 1.07
PCCB-212ENST00000474833 NINLQ9Y2I6 1382 aa21.76■■□□□ 1.07
PCCB-212ENST00000474833 PDE3BQ13370 1112 aa21.76■■□□□ 1.07
PCCB-212ENST00000474833 CASZ1Q86V15 1759 aa21.76■■□□□ 1.07
PCCB-212ENST00000474833 TCP11L2Q8N4U5 519 aa21.75■■□□□ 1.07
PCCB-212ENST00000474833 ACEP12821 1306 aa21.75■■□□□ 1.07
PCCB-212ENST00000474833 LRRC37A3O60309 1634 aa21.74■■□□□ 1.07
PCCB-212ENST00000474833 DCAF11Q8TEB1 546 aa21.74■■□□□ 1.07
PCCB-212ENST00000474833 KDM2AQ9Y2K7 1162 aa21.74■■□□□ 1.07
PCCB-212ENST00000474833 RAB3GAP2Q9H2M9 1393 aa21.74■■□□□ 1.07
PCCB-212ENST00000474833 NBPF8Q3BBV2 869 aa21.73■■□□□ 1.07
PCCB-212ENST00000474833 NBPF14Q5TI25 921 aa21.73■■□□□ 1.07
PCCB-212ENST00000474833 SBF2Q86WG5 1849 aa21.72■■□□□ 1.07
PCCB-212ENST00000474833 KCNQ2O43526 872 aa21.72■■□□□ 1.07
PCCB-212ENST00000474833 EVA1CP58658 441 aa21.72■■□□□ 1.07
PCCB-212ENST00000474833 CDK19Q9BWU1 502 aa21.72■■□□□ 1.07
PCCB-212ENST00000474833 SPON1Q9HCB6 807 aa21.72■■□□□ 1.07
PCCB-212ENST00000474833 PLEKHG3A1L390 1219 aa21.71■■□□□ 1.07
PCCB-212ENST00000474833 THRAP3Q9Y2W1 955 aaKnown RBP21.71■■□□□ 1.07
PCCB-212ENST00000474833 OVOS2A0A0G2JMS6 1433 aa21.7■■□□□ 1.06
PCCB-212ENST00000474833 OVOS2A0A0J9YW53 1432 aa21.7■■□□□ 1.06
PCCB-212ENST00000474833 OVOS2Q6IE36 1432 aa21.7■■□□□ 1.06
PCCB-212ENST00000474833 ANO8Q9HCE9 1232 aaPredicted RBP21.69■■□□□ 1.06
PCCB-212ENST00000474833 CCDC61Q9Y6R9 512 aa21.69■■□□□ 1.06
PCCB-212ENST00000474833 ABTB2Q8N961 1025 aa21.68■■□□□ 1.06
PCCB-212ENST00000474833 CRB1P82279 1406 aa21.68■■□□□ 1.06
PCCB-212ENST00000474833 WNK3Q9BYP7 1800 aa21.67■■□□□ 1.06
PCCB-212ENST00000474833 STAC3Q96MF2 364 aa21.67■■□□□ 1.06
PCCB-212ENST00000474833 PPP1R1BQ9UD71 204 aaPredicted RBP21.67■■□□□ 1.06
PCCB-212ENST00000474833 MYOM1P52179 1685 aa21.66■■□□□ 1.06
PCCB-212ENST00000474833 SLIT3O75094 1523 aa21.66■■□□□ 1.06
PCCB-212ENST00000474833 PTF1AQ7RTS3 328 aa21.66■■□□□ 1.06
PCCB-212ENST00000474833 PDGFDQ9GZP0 370 aaPredicted RBP21.66■■□□□ 1.06
PCCB-212ENST00000474833 GCP02774 474 aa21.65■■□□□ 1.06
PCCB-212ENST00000474833 COL18A1P39060 1754 aa21.65■■□□□ 1.06
PCCB-212ENST00000474833 KIAA1210Q9ULL0 1709 aa21.65■■□□□ 1.06
PCCB-212ENST00000474833 PLSCR1O15162 318 aa21.64■■□□□ 1.05
PCCB-212ENST00000474833 PPIP5K1Q6PFW1 1433 aa21.63■■□□□ 1.05
PCCB-212ENST00000474833 C11orf95C9JLR9 678 aaPredicted RBP21.62■■□□□ 1.05
PCCB-212ENST00000474833 AATKQ6ZMQ8 1374 aa21.61■■□□□ 1.05
PCCB-212ENST00000474833 PROM2Q8N271 834 aa21.61■■□□□ 1.05
PCCB-212ENST00000474833 BCL9O00512 1426 aa21.61■■□□□ 1.05
PCCB-212ENST00000474833 PIK3C2AO00443 1686 aa21.6■■□□□ 1.05
PCCB-212ENST00000474833 PTGER2P43116 358 aa21.6■■□□□ 1.05
PCCB-212ENST00000474833 NLRP13Q86W25 1043 aa21.6■■□□□ 1.05
PCCB-212ENST00000474833 USP6P35125 1406 aa21.58■■□□□ 1.05
PCCB-212ENST00000474833 BCL11BQ9C0K0 894 aaPredicted RBP21.58■■□□□ 1.05
PCCB-212ENST00000474833 BRD4O60885 1362 aaPredicted RBP21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms