RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 FNBP4Q8N3X1 1017 aaPredicted RBP25.6■■□□□ 1.69
EFNA1-204ENST00000474413 ATRNO75882 1429 aa25.58■■□□□ 1.69
EFNA1-204ENST00000474413 SSH2Q76I76 1423 aa25.58■■□□□ 1.69
EFNA1-204ENST00000474413 NGLY1Q96IV0 654 aa25.58■■□□□ 1.69
EFNA1-204ENST00000474413 USP6P35125 1406 aa25.57■■□□□ 1.68
EFNA1-204ENST00000474413 TESK2Q96S53 571 aa25.57■■□□□ 1.68
EFNA1-204ENST00000474413 PIK3C2AO00443 1686 aa25.56■■□□□ 1.68
EFNA1-204ENST00000474413 LMOD2Q6P5Q4 547 aa25.56■■□□□ 1.68
EFNA1-204ENST00000474413 NRAPQ86VF7 1730 aa25.56■■□□□ 1.68
EFNA1-204ENST00000474413 CDK12Q9NYV4 1490 aaPredicted RBP25.55■■□□□ 1.68
EFNA1-204ENST00000474413 NWD2Q9ULI1 1742 aa25.55■■□□□ 1.68
EFNA1-204ENST00000474413 PLEKHG5O94827 1062 aa25.55■■□□□ 1.68
EFNA1-204ENST00000474413 CABP1Q9NZU7 370 aa25.55■■□□□ 1.68
EFNA1-204ENST00000474413 RGS12O14924 1447 aa25.54■■□□□ 1.68
EFNA1-204ENST00000474413 MON2Q7Z3U7 1717 aa25.54■■□□□ 1.68
EFNA1-204ENST00000474413 CD163L1Q9NR16 1453 aa25.54■■□□□ 1.68
EFNA1-204ENST00000474413 TIMELESSQ9UNS1 1208 aa25.54■■□□□ 1.68
EFNA1-204ENST00000474413 CCER1Q8TC90 406 aaPredicted RBP25.53■■□□□ 1.68
EFNA1-204ENST00000474413 USP47Q96K76 1375 aa25.53■■□□□ 1.68
EFNA1-204ENST00000474413 CPSF1Q10570 1443 aaKnown RBP25.53■■□□□ 1.68
EFNA1-204ENST00000474413 PAK3O75914 559 aaPredicted RBP25.52■■□□□ 1.68
EFNA1-204ENST00000474413 USP21Q9UK80 565 aa25.52■■□□□ 1.68
EFNA1-204ENST00000474413 ATAD2Q6PL18 1390 aa25.52■■□□□ 1.68
EFNA1-204ENST00000474413 GLI3P10071 1580 aa25.51■■□□□ 1.67
EFNA1-204ENST00000474413 COL14A1Q05707 1796 aaKnown RBP25.51■■□□□ 1.67
EFNA1-204ENST00000474413 ST20-MTHFSA0A0A6YYL1 179 aa25.5■■□□□ 1.67
EFNA1-204ENST00000474413 QTRT2Q9H974 415 aaKnown RBP25.5■■□□□ 1.67
EFNA1-204ENST00000474413 USP19O94966 1318 aa25.49■■□□□ 1.67
EFNA1-204ENST00000474413 RXRBP28702 533 aa25.47■■□□□ 1.67
EFNA1-204ENST00000474413 NUTM2GQ5VZR2 741 aa25.47■■□□□ 1.67
EFNA1-204ENST00000474413 SLIT3O75094 1523 aa25.47■■□□□ 1.67
EFNA1-204ENST00000474413 BRD4O60885 1362 aaPredicted RBP25.46■■□□□ 1.67
EFNA1-204ENST00000474413 FAM83GA6ND36 823 aa25.46■■□□□ 1.67
EFNA1-204ENST00000474413 LMO7Q8WWI1 1683 aa25.45■■□□□ 1.66
EFNA1-204ENST00000474413 HAP1P54257 671 aaPredicted RBP25.44■■□□□ 1.66
EFNA1-204ENST00000474413 RBM6P78332 1123 aaKnown RBP25.44■■□□□ 1.66
EFNA1-204ENST00000474413 TRPC5Q9UL62 973 aaPredicted RBP25.44■■□□□ 1.66
EFNA1-204ENST00000474413 USP54Q70EL1 1684 aa25.43■■□□□ 1.66
EFNA1-204ENST00000474413 UNC5CLQ8IV45 518 aa25.42■■□□□ 1.66
EFNA1-204ENST00000474413 KIAA0232Q92628 1395 aa25.42■■□□□ 1.66
EFNA1-204ENST00000474413 MYOM1P52179 1685 aa25.4■■□□□ 1.66
EFNA1-204ENST00000474413 ABTB2Q8N961 1025 aa25.4■■□□□ 1.66
EFNA1-204ENST00000474413 TTC21BQ7Z4L5 1316 aa25.38■■□□□ 1.65
EFNA1-204ENST00000474413 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
EFNA1-204ENST00000474413 SLC12A5Q9H2X9 1139 aa25.38■■□□□ 1.65
EFNA1-204ENST00000474413 A0A1W2PP64 1363 aa25.38■■□□□ 1.65
EFNA1-204ENST00000474413 KTN1Q86UP2 1357 aaKnown RBP25.38■■□□□ 1.65
EFNA1-204ENST00000474413 CPDO75976 1380 aa25.37■■□□□ 1.65
EFNA1-204ENST00000474413 GJD4Q96KN9 370 aaPredicted RBP25.36■■□□□ 1.65
EFNA1-204ENST00000474413 NFAT5O94916 1531 aa25.36■■□□□ 1.65
EFNA1-204ENST00000474413 CAMTA1Q9Y6Y1 1673 aa25.36■■□□□ 1.65
EFNA1-204ENST00000474413 EP400Q96L91 3159 aa25.35■■□□□ 1.65
EFNA1-204ENST00000474413 COL18A1P39060 1754 aa25.34■■□□□ 1.65
EFNA1-204ENST00000474413 CHRNA2Q15822 529 aa25.34■■□□□ 1.65
EFNA1-204ENST00000474413 VPS72Q15906 364 aa25.34■■□□□ 1.65
EFNA1-204ENST00000474413 PRDM11Q9NQV5 511 aa25.34■■□□□ 1.65
EFNA1-204ENST00000474413 BTG4Q9NY30 223 aa25.34■■□□□ 1.65
EFNA1-204ENST00000474413 ZC3H6P61129 1189 aaKnown RBP25.33■■□□□ 1.65
EFNA1-204ENST00000474413 ZNF692Q9BU19 519 aaPredicted RBP25.33■■□□□ 1.65
EFNA1-204ENST00000474413 BRWD3Q6RI45 1802 aa25.33■■□□□ 1.64
EFNA1-204ENST00000474413 EDC4Q6P2E9 1401 aaKnown RBP25.32■■□□□ 1.64
EFNA1-204ENST00000474413 GCP02774 474 aa25.32■■□□□ 1.64
EFNA1-204ENST00000474413 TTC21AQ8NDW8 1320 aa25.32■■□□□ 1.64
EFNA1-204ENST00000474413 NINLQ9Y2I6 1382 aa25.31■■□□□ 1.64
EFNA1-204ENST00000474413 NLRP13Q86W25 1043 aa25.31■■□□□ 1.64
EFNA1-204ENST00000474413 TMC1Q8TDI8 760 aa25.31■■□□□ 1.64
EFNA1-204ENST00000474413 NLRP6P59044 892 aa25.3■■□□□ 1.64
EFNA1-204ENST00000474413 ZRANB1Q9UGI0 708 aa25.3■■□□□ 1.64
EFNA1-204ENST00000474413 THSD7AQ9UPZ6 1657 aa25.29■■□□□ 1.64
EFNA1-204ENST00000474413 USP31Q70CQ4 1352 aa25.29■■□□□ 1.64
EFNA1-204ENST00000474413 OVOS2A0A0J9YW53 1432 aa25.28■■□□□ 1.64
EFNA1-204ENST00000474413 OVOS2Q6IE36 1432 aa25.28■■□□□ 1.64
EFNA1-204ENST00000474413 TMF1P82094 1093 aa25.26■■□□□ 1.63
EFNA1-204ENST00000474413 NME9Q86XW9 330 aa25.26■■□□□ 1.63
EFNA1-204ENST00000474413 COL5A2P05997 1499 aaPredicted RBP25.26■■□□□ 1.63
EFNA1-204ENST00000474413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.25■■□□□ 1.63
EFNA1-204ENST00000474413 SPATA31A5Q5VU36 1347 aa25.25■■□□□ 1.63
EFNA1-204ENST00000474413 SPATA31A7Q8IWB4 1347 aa25.25■■□□□ 1.63
EFNA1-204ENST00000474413 ANKRD36BQ8N2N9 1353 aa25.25■■□□□ 1.63
EFNA1-204ENST00000474413 HDGFL2Q7Z4V5 671 aaPredicted RBP25.23■■□□□ 1.63
EFNA1-204ENST00000474413 UPF1Q92900 1129 aaKnown RBP eCLIP25.23■■□□□ 1.632e-35■■■■■ 61.9
EFNA1-204ENST00000474413 RGPD5Q99666 1765 aa25.23■■□□□ 1.63
EFNA1-204ENST00000474413 AATKQ6ZMQ8 1374 aa25.22■■□□□ 1.63
EFNA1-204ENST00000474413 ONECUT3O60422 494 aaPredicted RBP25.22■■□□□ 1.63
EFNA1-204ENST00000474413 SLC24A1O60721 1099 aa25.22■■□□□ 1.63
EFNA1-204ENST00000474413 TERF2IPQ9NYB0 399 aa25.22■■□□□ 1.63
EFNA1-204ENST00000474413 HSPA5P11021 654 aaKnown RBP25.21■■□□□ 1.63
EFNA1-204ENST00000474413 LTN1O94822 1766 aa25.21■■□□□ 1.63
EFNA1-204ENST00000474413 ABCC6O95255 1503 aa25.2■■□□□ 1.62
EFNA1-204ENST00000474413 SPATA31A1Q5TZJ5 1347 aa25.19■■□□□ 1.62
EFNA1-204ENST00000474413 CCDC9Q9Y3X0 531 aaKnown RBP25.19■■□□□ 1.62
EFNA1-204ENST00000474413 ARHGEF25Q86VW2 580 aa25.18■■□□□ 1.62
EFNA1-204ENST00000474413 SEPT12Q8IYM1 358 aa25.18■■□□□ 1.62
EFNA1-204ENST00000474413 KIF20BQ96Q89 1820 aa25.17■■□□□ 1.62
EFNA1-204ENST00000474413 FAM98CQ17RN3 349 aaKnown RBP25.17■■□□□ 1.62
EFNA1-204ENST00000474413 STRN4Q9NRL3 753 aa25.17■■□□□ 1.62
EFNA1-204ENST00000474413 AXIN2Q9Y2T1 843 aa25.17■■□□□ 1.62
EFNA1-204ENST00000474413 SOX12O15370 315 aa25.16■■□□□ 1.62
EFNA1-204ENST00000474413 LARP1Q6PKG0 1096 aaKnown RBP25.16■■□□□ 1.62
EFNA1-204ENST00000474413 WNK3Q9BYP7 1800 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms