RNA–Protein interactions for RNA: ENST00000474082.1

FAM3C-204, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 2

Gene FAM3C, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-204ENST00000474082 IL21Q9HBE4 155 aa11.78□□□□□ -0.52
FAM3C-204ENST00000474082 EVA1BQ9NVM1 165 aa11.78□□□□□ -0.52
FAM3C-204ENST00000474082 CTHP32929 405 aa11.77□□□□□ -0.53
FAM3C-204ENST00000474082 MYT1LQ9UL68 1186 aa11.77□□□□□ -0.53
FAM3C-204ENST00000474082 KCNH2Q12809 1159 aa11.75□□□□□ -0.53
FAM3C-204ENST00000474082 FBXO45P0C2W1 286 aa11.74□□□□□ -0.53
FAM3C-204ENST00000474082 ZC3H4Q9UPT8 1303 aaKnown RBP11.74□□□□□ -0.53
FAM3C-204ENST00000474082 SOX11P35716 441 aa11.73□□□□□ -0.53
FAM3C-204ENST00000474082 NR1H3Q13133 447 aa11.73□□□□□ -0.53
FAM3C-204ENST00000474082 ZBBXA8MT70 800 aa11.72□□□□□ -0.53
FAM3C-204ENST00000474082 SLC6A16Q9GZN6 736 aa11.72□□□□□ -0.53
FAM3C-204ENST00000474082 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
FAM3C-204ENST00000474082 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
FAM3C-204ENST00000474082 UCN2Q96RP3 112 aa11.7□□□□□ -0.54
FAM3C-204ENST00000474082 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
FAM3C-204ENST00000474082 SEMA3FQ13275 785 aa11.69□□□□□ -0.54
FAM3C-204ENST00000474082 PTCRAQ6ISU1 281 aaPredicted RBP11.69□□□□□ -0.54
FAM3C-204ENST00000474082 ARMC2Q8NEN0 867 aa11.69□□□□□ -0.54
FAM3C-204ENST00000474082 CFAP70Q5T0N1 1121 aa11.68□□□□□ -0.54
FAM3C-204ENST00000474082 PDXDC2PQ6P474 469 aa11.68□□□□□ -0.54
FAM3C-204ENST00000474082 CCDC24Q8N4L8 307 aa11.68□□□□□ -0.54
FAM3C-204ENST00000474082 GPKOWQ92917 476 aaPredicted RBP eCLIP11.68□□□□□ -0.54
FAM3C-204ENST00000474082 OCSTAMPQ9BR26 566 aa11.68□□□□□ -0.54
FAM3C-204ENST00000474082 PPP1R12CQ9BZL4 782 aa11.68□□□□□ -0.54
FAM3C-204ENST00000474082 S1PR4O95977 384 aa11.67□□□□□ -0.54
FAM3C-204ENST00000474082 UNC93B1Q9H1C4 597 aa11.67□□□□□ -0.54
FAM3C-204ENST00000474082 GPSM3Q9Y4H4 160 aa11.66□□□□□ -0.54
FAM3C-204ENST00000474082 PALM3A6NDB9 673 aaPredicted RBP11.65□□□□□ -0.54
FAM3C-204ENST00000474082 NBPF14Q5TI25 921 aa11.65□□□□□ -0.54
FAM3C-204ENST00000474082 PPP1R15AO75807 674 aaPredicted RBP11.64□□□□□ -0.55
FAM3C-204ENST00000474082 PTK2Q05397 1052 aa11.64□□□□□ -0.55
FAM3C-204ENST00000474082 TFIP11Q9UBB9 837 aaKnown RBP11.63□□□□□ -0.55
FAM3C-204ENST00000474082 HCSTQ9UBK5 93 aa11.63□□□□□ -0.55
FAM3C-204ENST00000474082 FCF1Q9Y324 198 aaKnown RBP11.63□□□□□ -0.55
FAM3C-204ENST00000474082 RFX1P22670 979 aa11.62□□□□□ -0.55
FAM3C-204ENST00000474082 RNF166Q96A37 237 aaPredicted RBP11.62□□□□□ -0.55
FAM3C-204ENST00000474082 ITGBL1O95965 494 aaPredicted RBP11.61□□□□□ -0.55
FAM3C-204ENST00000474082 SRPK2P78362 688 aaKnown RBP11.61□□□□□ -0.55
FAM3C-204ENST00000474082 TBC1D9Q6ZT07 1266 aa11.61□□□□□ -0.55
FAM3C-204ENST00000474082 SH3BP5LQ7L8J4 393 aa11.61□□□□□ -0.55
FAM3C-204ENST00000474082 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.6□□□□□ -0.55
FAM3C-204ENST00000474082 KCNC4Q03721 635 aa11.6□□□□□ -0.55
FAM3C-204ENST00000474082 SPNS2Q8IVW8 549 aa11.6□□□□□ -0.55
FAM3C-204ENST00000474082 PBXIP1Q96AQ6 731 aa11.6□□□□□ -0.55
FAM3C-204ENST00000474082 ARHGAP9Q9BRR9 750 aa11.6□□□□□ -0.55
FAM3C-204ENST00000474082 LMOD1P29536 600 aaPredicted RBP11.59□□□□□ -0.55
FAM3C-204ENST00000474082 ADAM32Q8TC27 787 aa11.59□□□□□ -0.55
FAM3C-204ENST00000474082 BAP1Q92560 729 aa11.59□□□□□ -0.55
FAM3C-204ENST00000474082 PIK3CDO00329 1044 aa11.58□□□□□ -0.56
FAM3C-204ENST00000474082 SH3RF1Q7Z6J0 888 aa11.58□□□□□ -0.56
FAM3C-204ENST00000474082 RETREG2Q8NC44 543 aa11.58□□□□□ -0.56
FAM3C-204ENST00000474082 MAFBQ9Y5Q3 323 aaPredicted RBP11.58□□□□□ -0.56
FAM3C-204ENST00000474082 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
FAM3C-204ENST00000474082 ATP9BO43861 1147 aa11.57□□□□□ -0.56
FAM3C-204ENST00000474082 PDIA4P13667 645 aaKnown RBP11.57□□□□□ -0.56
FAM3C-204ENST00000474082 LINC01559Q495D7 138 aa11.56□□□□□ -0.56
FAM3C-204ENST00000474082 PCDHB9Q9Y5E1 797 aa11.56□□□□□ -0.56
FAM3C-204ENST00000474082 ZBTB33Q86T24 672 aa11.55□□□□□ -0.56
FAM3C-204ENST00000474082 ZNF511Q8NB15 262 aa11.55□□□□□ -0.56
FAM3C-204ENST00000474082 CEP126Q9P2H0 1117 aa11.55□□□□□ -0.56
FAM3C-204ENST00000474082 RNF223E7ERA6 249 aa11.54□□□□□ -0.56
FAM3C-204ENST00000474082 MCCD1P59942 119 aaPredicted RBP11.54□□□□□ -0.56
FAM3C-204ENST00000474082 NFATC2IPQ8NCF5 419 aa11.54□□□□□ -0.56
FAM3C-204ENST00000474082 FAM174AQ8TBP5 190 aa11.54□□□□□ -0.56
FAM3C-204ENST00000474082 FOXJ1Q92949 421 aa11.54□□□□□ -0.56
FAM3C-204ENST00000474082 ACIN1Q9UKV3 1341 aaKnown RBP11.54□□□□□ -0.56
FAM3C-204ENST00000474082 C4orf48Q5BLP8 95 aa11.53□□□□□ -0.56
FAM3C-204ENST00000474082 ZNF592Q92610 1267 aa11.53□□□□□ -0.56
FAM3C-204ENST00000474082 CARD14Q9BXL6 1004 aa11.53□□□□□ -0.56
FAM3C-204ENST00000474082 MAGEB6P1A0A0J9YX57 407 aa11.52□□□□□ -0.57
FAM3C-204ENST00000474082 BPHLQ86WA6 291 aaPredicted RBP11.52□□□□□ -0.57
FAM3C-204ENST00000474082 PHTF2Q8N3S3 785 aa11.52□□□□□ -0.57
FAM3C-204ENST00000474082 TRAIPQ9BWF2 469 aa11.52□□□□□ -0.57
FAM3C-204ENST00000474082 SKIP12755 728 aa11.51□□□□□ -0.57
FAM3C-204ENST00000474082 PLA2G2CQ5R387 149 aa11.51□□□□□ -0.57
FAM3C-204ENST00000474082 SH3BP2P78314 561 aa11.5□□□□□ -0.57
FAM3C-204ENST00000474082 AGERQ15109 404 aa11.5□□□□□ -0.57
FAM3C-204ENST00000474082 ERFEQ4G0M1 354 aa11.5□□□□□ -0.57
FAM3C-204ENST00000474082 CDCA8Q53HL2 280 aa11.5□□□□□ -0.57
FAM3C-204ENST00000474082 ANKLE1Q8NAG6 615 aa11.5□□□□□ -0.57
FAM3C-204ENST00000474082 USP17L3A6NCW0 530 aa11.49□□□□□ -0.57
FAM3C-204ENST00000474082 USP17L4A6NCW7 530 aa11.49□□□□□ -0.57
FAM3C-204ENST00000474082 USP17L5A8MUK1 530 aa11.49□□□□□ -0.57
FAM3C-204ENST00000474082 TRIM26Q12899 539 aaPredicted RBP11.49□□□□□ -0.57
FAM3C-204ENST00000474082 SLFNL1Q499Z3 407 aa11.49□□□□□ -0.57
FAM3C-204ENST00000474082 USP17L2Q6R6M4 530 aa11.49□□□□□ -0.57
FAM3C-204ENST00000474082 USP17L1Q7RTZ2 530 aa11.49□□□□□ -0.57
FAM3C-204ENST00000474082 DZIP3Q86Y13 1208 aaKnown RBP11.49□□□□□ -0.57
FAM3C-204ENST00000474082 KANK4Q5T7N3 995 aaPredicted RBP11.48□□□□□ -0.57
FAM3C-204ENST00000474082 PLEKHM2Q8IWE5 1019 aa11.48□□□□□ -0.57
FAM3C-204ENST00000474082 GGCXP38435 758 aa11.47□□□□□ -0.57
FAM3C-204ENST00000474082 PPP1R18Q6NYC8 613 aa11.47□□□□□ -0.57
FAM3C-204ENST00000474082 RNF135Q8IUD6 432 aa11.47□□□□□ -0.57
FAM3C-204ENST00000474082 C1QTNF2Q9BXJ5 285 aa11.47□□□□□ -0.57
FAM3C-204ENST00000474082 CHIC2Q9UKJ5 165 aa11.47□□□□□ -0.57
FAM3C-204ENST00000474082 ZBTB24O43167 697 aaPredicted RBP11.46□□□□□ -0.57
FAM3C-204ENST00000474082 ATG7O95352 703 aa11.46□□□□□ -0.57
FAM3C-204ENST00000474082 TRIM32Q13049 653 aa11.46□□□□□ -0.57
FAM3C-204ENST00000474082 DEPDC4Q8N2C3 294 aa11.46□□□□□ -0.57
FAM3C-204ENST00000474082 VRTNQ9H8Y1 702 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms