RNA–Protein interactions for RNA: ENST00000473546.1

ARF1-205, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-205ENST00000473546 NRKQ7Z2Y5 1582 aa19■□□□□ 0.63
ARF1-205ENST00000473546 ACEP12821 1306 aa19■□□□□ 0.63
ARF1-205ENST00000473546 PIK3C2AO00443 1686 aa18.99■□□□□ 0.63
ARF1-205ENST00000473546 CDK12Q9NYV4 1490 aaPredicted RBP18.99■□□□□ 0.63
ARF1-205ENST00000473546 ARHGEF10O15013 1369 aa18.99■□□□□ 0.63
ARF1-205ENST00000473546 USP21Q9UK80 565 aa18.99■□□□□ 0.63
ARF1-205ENST00000473546 MON2Q7Z3U7 1717 aa18.98■□□□□ 0.63
ARF1-205ENST00000473546 SRPK2P78362 688 aaKnown RBP18.98■□□□□ 0.63
ARF1-205ENST00000473546 QTRT2Q9H974 415 aaKnown RBP18.98■□□□□ 0.63
ARF1-205ENST00000473546 COL14A1Q05707 1796 aaKnown RBP18.98■□□□□ 0.63
ARF1-205ENST00000473546 RXRBP28702 533 aa18.97■□□□□ 0.63
ARF1-205ENST00000473546 CCDC61Q9Y6R9 512 aa18.96■□□□□ 0.63
ARF1-205ENST00000473546 PLEKHG3A1L390 1219 aa18.95■□□□□ 0.62
ARF1-205ENST00000473546 PAK3O75914 559 aaPredicted RBP18.95■□□□□ 0.62
ARF1-205ENST00000473546 NUTM2GQ5VZR2 741 aa18.95■□□□□ 0.62
ARF1-205ENST00000473546 CARD11Q9BXL7 1154 aa18.94■□□□□ 0.62
ARF1-205ENST00000473546 RBM6P78332 1123 aaKnown RBP18.93■□□□□ 0.62
ARF1-205ENST00000473546 EP400Q96L91 3159 aa18.93■□□□□ 0.62
ARF1-205ENST00000473546 USP6P35125 1406 aa18.91■□□□□ 0.62
ARF1-205ENST00000473546 HAP1P54257 671 aaPredicted RBP18.91■□□□□ 0.62
ARF1-205ENST00000473546 CABP1Q9NZU7 370 aa18.91■□□□□ 0.62
ARF1-205ENST00000473546 TRPC5Q9UL62 973 aaPredicted RBP18.91■□□□□ 0.62
ARF1-205ENST00000473546 RGPD5Q99666 1765 aa18.91■□□□□ 0.62
ARF1-205ENST00000473546 LMO7Q8WWI1 1683 aa18.9■□□□□ 0.62
ARF1-205ENST00000473546 FAM83GA6ND36 823 aa18.9■□□□□ 0.62
ARF1-205ENST00000473546 EVC2Q86UK5 1308 aa18.9■□□□□ 0.62
ARF1-205ENST00000473546 SBNO2Q9Y2G9 1366 aa18.9■□□□□ 0.62
ARF1-205ENST00000473546 SSH2Q76I76 1423 aa18.9■□□□□ 0.62
ARF1-205ENST00000473546 CD163L1Q9NR16 1453 aa18.89■□□□□ 0.61
ARF1-205ENST00000473546 UNC5CLQ8IV45 518 aa18.88■□□□□ 0.61
ARF1-205ENST00000473546 COL18A1P39060 1754 aa18.86■□□□□ 0.61
ARF1-205ENST00000473546 SLIT3O75094 1523 aa18.86■□□□□ 0.61
ARF1-205ENST00000473546 KIAA0232Q92628 1395 aa18.86■□□□□ 0.61
ARF1-205ENST00000473546 USP19O94966 1318 aa18.85■□□□□ 0.61
ARF1-205ENST00000473546 GJD4Q96KN9 370 aaPredicted RBP18.85■□□□□ 0.61
ARF1-205ENST00000473546 USP54Q70EL1 1684 aa18.85■□□□□ 0.61
ARF1-205ENST00000473546 CPSF1Q10570 1443 aaKnown RBP18.84■□□□□ 0.61
ARF1-205ENST00000473546 CHRNA2Q15822 529 aa18.84■□□□□ 0.61
ARF1-205ENST00000473546 UPF1Q92900 1129 aaKnown RBP eCLIP18.84■□□□□ 0.61
ARF1-205ENST00000473546 TESK2Q96S53 571 aa18.84■□□□□ 0.61
ARF1-205ENST00000473546 CAMTA1Q9Y6Y1 1673 aa18.84■□□□□ 0.61
ARF1-205ENST00000473546 MYOM1P52179 1685 aa18.83■□□□□ 0.61
ARF1-205ENST00000473546 THSD7AQ9UPZ6 1657 aa18.83■□□□□ 0.61
ARF1-205ENST00000473546 ABTB2Q8N961 1025 aa18.83■□□□□ 0.6
ARF1-205ENST00000473546 BTG4Q9NY30 223 aa18.83■□□□□ 0.6
ARF1-205ENST00000473546 ST20-MTHFSA0A0A6YYL1 179 aa18.82■□□□□ 0.6
ARF1-205ENST00000473546 ZC3H6P61129 1189 aaKnown RBP18.82■□□□□ 0.6
ARF1-205ENST00000473546 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
ARF1-205ENST00000473546 LTN1O94822 1766 aa18.81■□□□□ 0.6
ARF1-205ENST00000473546 VPS72Q15906 364 aa18.81■□□□□ 0.6
ARF1-205ENST00000473546 USP47Q96K76 1375 aa18.81■□□□□ 0.6
ARF1-205ENST00000473546 WNK3Q9BYP7 1800 aa18.8■□□□□ 0.6
ARF1-205ENST00000473546 PRDM11Q9NQV5 511 aa18.8■□□□□ 0.6
ARF1-205ENST00000473546 NFAT5O94916 1531 aa18.79■□□□□ 0.6
ARF1-205ENST00000473546 TTC21BQ7Z4L5 1316 aa18.78■□□□□ 0.6
ARF1-205ENST00000473546 ZRANB1Q9UGI0 708 aa18.78■□□□□ 0.6
ARF1-205ENST00000473546 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
ARF1-205ENST00000473546 KTN1Q86UP2 1357 aaKnown RBP18.77■□□□□ 0.6
ARF1-205ENST00000473546 CLSPNQ9HAW4 1339 aa18.76■□□□□ 0.59
ARF1-205ENST00000473546 CCDC9Q9Y3X0 531 aaKnown RBP18.76■□□□□ 0.59
ARF1-205ENST00000473546 A0A1W2PP64 1363 aa18.76■□□□□ 0.59
ARF1-205ENST00000473546 BRD4O60885 1362 aaPredicted RBP18.76■□□□□ 0.59
ARF1-205ENST00000473546 CPDO75976 1380 aa18.76■□□□□ 0.59
ARF1-205ENST00000473546 COL5A2P05997 1499 aaPredicted RBP18.74■□□□□ 0.59
ARF1-205ENST00000473546 GCP02774 474 aa18.74■□□□□ 0.59
ARF1-205ENST00000473546 NLRP6P59044 892 aa18.74■□□□□ 0.59
ARF1-205ENST00000473546 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
ARF1-205ENST00000473546 SPATA31A5Q5VU36 1347 aa18.74■□□□□ 0.59
ARF1-205ENST00000473546 SPATA31A7Q8IWB4 1347 aa18.74■□□□□ 0.59
ARF1-205ENST00000473546 KIF20BQ96Q89 1820 aa18.73■□□□□ 0.59
ARF1-205ENST00000473546 FAM98CQ17RN3 349 aaKnown RBP18.73■□□□□ 0.59
ARF1-205ENST00000473546 NLRP13Q86W25 1043 aa18.73■□□□□ 0.59
ARF1-205ENST00000473546 SEPT12Q8IYM1 358 aa18.73■□□□□ 0.59
ARF1-205ENST00000473546 TMC1Q8TDI8 760 aa18.73■□□□□ 0.59
ARF1-205ENST00000473546 STRN4Q9NRL3 753 aa18.73■□□□□ 0.59
ARF1-205ENST00000473546 ZBTB7CA1YPR0 619 aa18.72■□□□□ 0.59
ARF1-205ENST00000473546 SOX12O15370 315 aa18.71■□□□□ 0.59
ARF1-205ENST00000473546 NME9Q86XW9 330 aa18.71■□□□□ 0.59
ARF1-205ENST00000473546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.71■□□□□ 0.597e-7■■□□□ 13.6
ARF1-205ENST00000473546 TNS1Q9HBL0 1735 aaKnown RBP18.71■□□□□ 0.59
ARF1-205ENST00000473546 ONECUT3O60422 494 aaPredicted RBP18.7■□□□□ 0.58
ARF1-205ENST00000473546 PARP4Q9UKK3 1724 aaKnown RBP18.7■□□□□ 0.58
ARF1-205ENST00000473546 SPATA31A1Q5TZJ5 1347 aa18.7■□□□□ 0.58
ARF1-205ENST00000473546 EDC4Q6P2E9 1401 aaKnown RBP18.69■□□□□ 0.58
ARF1-205ENST00000473546 LARP1Q6PKG0 1096 aaKnown RBP18.69■□□□□ 0.58
ARF1-205ENST00000473546 LRRC37A3O60309 1634 aa18.69■□□□□ 0.58
ARF1-205ENST00000473546 TTC21AQ8NDW8 1320 aa18.69■□□□□ 0.58
ARF1-205ENST00000473546 RGPD2P0DJD1 1756 aa18.68■□□□□ 0.58
ARF1-205ENST00000473546 OVOS2A0A0J9YW53 1432 aa18.68■□□□□ 0.58
ARF1-205ENST00000473546 OVOS2Q6IE36 1432 aa18.68■□□□□ 0.58
ARF1-205ENST00000473546 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
ARF1-205ENST00000473546 FAM182BQ5T319 152 aa18.67■□□□□ 0.58
ARF1-205ENST00000473546 TIMELESSQ9UNS1 1208 aa18.67■□□□□ 0.58
ARF1-205ENST00000473546 USP31Q70CQ4 1352 aa18.67■□□□□ 0.58
ARF1-205ENST00000473546 USP35Q9P2H5 1018 aa18.66■□□□□ 0.58
ARF1-205ENST00000473546 AXIN2Q9Y2T1 843 aa18.66■□□□□ 0.58
ARF1-205ENST00000473546 RGPD1P0DJD0 1748 aa18.66■□□□□ 0.58
ARF1-205ENST00000473546 A0A0G2JS52 829 aa18.65■□□□□ 0.58
ARF1-205ENST00000473546 MYT1Q01538 1121 aa18.65■□□□□ 0.58
ARF1-205ENST00000473546 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms