RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 PHLDB1Q86UU1 1377 aa5.9□□□□□ -1.47
UBE2D4-210ENST00000473007 VPS8Q8N3P4 1428 aa5.9□□□□□ -1.47
UBE2D4-210ENST00000473007 EPRSP07814 1512 aaKnown RBP5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 PCF11O94913 1555 aaKnown RBP5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 ANKRD62A6NC57 917 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 MOXD2PA6NHM9 499 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 MAP3K7O43318 606 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 SOX11P35716 441 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 GJA5P36382 358 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 FAM69CQ0P6D2 419 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 TBC1D9Q6ZT07 1266 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 NPAS4Q8IUM7 802 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 EPAS1Q99814 870 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 TRIM34Q9BYJ4 488 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 PCDHB15Q9Y5E8 787 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 ZC3H4Q9UPT8 1303 aaKnown RBP5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 ADGRL1O94910 1474 aa5.89□□□□□ -1.47
UBE2D4-210ENST00000473007 MYO5CQ9NQX4 1742 aa5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 NUTM2BA6NNL0 878 aaPredicted RBP5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 NUTM2EB1AL46 878 aaPredicted RBP5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 SSFA2P28290 1259 aa5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 ZNF326Q5BKZ1 582 aaKnown RBP5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 KANK4Q5T7N3 995 aaPredicted RBP5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 NUTM2DQ5VT03 806 aaPredicted RBP5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 NUTM2AQ8IVF1 878 aaPredicted RBP5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 ANO8Q9HCE9 1232 aaPredicted RBP5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 TRPC6Q9Y210 931 aa5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 ARID4BQ4LE39 1312 aaPredicted RBP5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 FHOD3Q2V2M9 1422 aa5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 ATP10BO94823 1461 aa5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 MAGI3Q5TCQ9 1506 aa5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 KIF14Q15058 1648 aa5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 ITSN2Q9NZM3 1697 aa5.88□□□□□ -1.47
UBE2D4-210ENST00000473007 ANKRD33BA6NCL7 494 aa5.87□□□□□ -1.47
UBE2D4-210ENST00000473007 GIMAP6Q6P9H5 292 aa5.87□□□□□ -1.47
UBE2D4-210ENST00000473007 CERS3Q8IU89 383 aa5.87□□□□□ -1.47
UBE2D4-210ENST00000473007 STK32AQ8WU08 396 aa5.87□□□□□ -1.47
UBE2D4-210ENST00000473007 HIRIP3Q9BW71 556 aaPredicted RBP5.87□□□□□ -1.47
UBE2D4-210ENST00000473007 HMX1Q9NP08 348 aaPredicted RBP5.87□□□□□ -1.47
UBE2D4-210ENST00000473007 ASXL2Q76L83 1435 aa5.87□□□□□ -1.47
UBE2D4-210ENST00000473007 TEX14Q8IWB6 1497 aa5.87□□□□□ -1.47
UBE2D4-210ENST00000473007 TIAM1Q13009 1591 aa5.87□□□□□ -1.47
UBE2D4-210ENST00000473007 PPRC1Q5VV67 1664 aaKnown RBP5.87□□□□□ -1.47
UBE2D4-210ENST00000473007 SUPT6HQ7KZ85 1726 aaKnown RBP5.86□□□□□ -1.47
UBE2D4-210ENST00000473007 EHBP1L1Q8N3D4 1523 aa5.86□□□□□ -1.47
UBE2D4-210ENST00000473007 ATP9BO43861 1147 aa5.86□□□□□ -1.47
UBE2D4-210ENST00000473007 PHF14O94880 888 aa5.86□□□□□ -1.47
UBE2D4-210ENST00000473007 C7P10643 843 aa5.86□□□□□ -1.47
UBE2D4-210ENST00000473007 CD46P15529 392 aa5.86□□□□□ -1.47
UBE2D4-210ENST00000473007 NDUFV2P19404 249 aa5.86□□□□□ -1.47
UBE2D4-210ENST00000473007 NUTM1Q86Y26 1132 aa5.86□□□□□ -1.47
UBE2D4-210ENST00000473007 CABLES1Q8TDN4 633 aa5.86□□□□□ -1.47
UBE2D4-210ENST00000473007 RBM33Q96EV2 1170 aaKnown RBP5.86□□□□□ -1.47
UBE2D4-210ENST00000473007 CDC42BPAQ5VT25 1732 aa5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 KDM6BO15054 1643 aa5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 PREX2Q70Z35 1606 aa5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 NEO1Q92859 1461 aa5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 TROQ12816 1431 aaPredicted RBP5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 RECKO95980 971 aa5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 SEMA3FQ13275 785 aa5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 PRPF38BQ5VTL8 546 aaKnown RBP5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 PADI6Q6TGC4 694 aa5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 TMEM121BQ9BXQ6 578 aaPredicted RBP5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 SLAIN2Q9P270 581 aa5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 NOVA2Q9UNW9 492 aaKnown RBP5.85□□□□□ -1.47
UBE2D4-210ENST00000473007 KDM4AO75164 1064 aa5.84□□□□□ -1.47
UBE2D4-210ENST00000473007 PRKAR2AP13861 404 aaKnown RBP5.84□□□□□ -1.47
UBE2D4-210ENST00000473007 SERPINB4P48594 390 aa5.84□□□□□ -1.47
UBE2D4-210ENST00000473007 CTDSPL2Q05D32 466 aa5.84□□□□□ -1.47
UBE2D4-210ENST00000473007 DPH6Q7L8W6 267 aa5.84□□□□□ -1.47
UBE2D4-210ENST00000473007 FBXO33Q7Z6M2 555 aa5.84□□□□□ -1.47
UBE2D4-210ENST00000473007 CDC42BPBQ9Y5S2 1711 aa5.84□□□□□ -1.47
UBE2D4-210ENST00000473007 TAGLNQ01995 201 aaKnown RBP5.83□□□□□ -1.48
UBE2D4-210ENST00000473007 TTC13Q8NBP0 860 aa5.83□□□□□ -1.48
UBE2D4-210ENST00000473007 PHF12Q96QT6 1004 aa5.83□□□□□ -1.48
UBE2D4-210ENST00000473007 BIN2Q9UBW5 565 aaPredicted RBP5.83□□□□□ -1.48
UBE2D4-210ENST00000473007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.83□□□□□ -1.48
UBE2D4-210ENST00000473007 PLEKHD1A6NEE1 506 aa5.82□□□□□ -1.48
UBE2D4-210ENST00000473007 ZNF662Q6ZS27 426 aa5.82□□□□□ -1.48
UBE2D4-210ENST00000473007 SLAIN1Q8ND83 568 aa5.82□□□□□ -1.48
UBE2D4-210ENST00000473007 ZBTB3Q9H5J0 574 aa5.82□□□□□ -1.48
UBE2D4-210ENST00000473007 PCDHGA10Q9Y5H3 936 aa5.82□□□□□ -1.48
UBE2D4-210ENST00000473007 TTC37Q6PGP7 1564 aa5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 SPATA31D1Q6ZQQ2 1576 aa5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 CDK13Q14004 1512 aaKnown RBP5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 ERCC5P28715 1186 aaPredicted RBP5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 RBM46Q8TBY0 533 aaKnown RBP5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 CERKQ8TCT0 537 aa5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 PTCD2Q8WV60 388 aaKnown RBP5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 CLP1Q92989 425 aaKnown RBP5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 ZRANB1Q9UGI0 708 aa5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 RICTORQ6R327 1708 aa5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 LRRC9Q6ZRR7 1453 aa5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 PLEKHH2Q8IVE3 1493 aa5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 TSPOAP1O95153 1857 aa5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 PLCH2O75038 1416 aa5.81□□□□□ -1.48
UBE2D4-210ENST00000473007 ZMYM4Q5VZL5 1548 aa5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 MAGI2Q86UL8 1455 aa5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 TTLL13PA6NNM8 815 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms