RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SEPT9Q9UHD8 586 aaPredicted RBP4.13□□□□□ -1.75
XRN1-210ENST00000472697 G3V3G9 751 aa4.13□□□□□ -1.75
XRN1-210ENST00000472697 C6orf229H3BNL8 230 aa4.13□□□□□ -1.75
XRN1-210ENST00000472697 PRMT3O60678 531 aa4.13□□□□□ -1.75
XRN1-210ENST00000472697 RBM46Q8TBY0 533 aaKnown RBP4.13□□□□□ -1.75
XRN1-210ENST00000472697 RNF166Q96A37 237 aaPredicted RBP4.13□□□□□ -1.75
XRN1-210ENST00000472697 MKNK1Q9BUB5 465 aa4.13□□□□□ -1.75
XRN1-210ENST00000472697 ZBTB3Q9H5J0 574 aa4.13□□□□□ -1.75
XRN1-210ENST00000472697 BIN2Q9UBW5 565 aaPredicted RBP4.13□□□□□ -1.75
XRN1-210ENST00000472697 ABL1P00519 1130 aa4.12□□□□□ -1.75
XRN1-210ENST00000472697 TSNAXIP1Q2TAA8 658 aa4.12□□□□□ -1.75
XRN1-210ENST00000472697 RSPH4AQ5TD94 716 aa4.12□□□□□ -1.75
XRN1-210ENST00000472697 PRIMPOLQ96LW4 560 aa4.12□□□□□ -1.75
XRN1-210ENST00000472697 SETDB2Q96T68 719 aa4.12□□□□□ -1.75
XRN1-210ENST00000472697 CWC22Q9HCG8 908 aaKnown RBP4.12□□□□□ -1.75
XRN1-210ENST00000472697 MAP10Q9P2G4 905 aa4.12□□□□□ -1.75
XRN1-210ENST00000472697 PNMA3Q9UL41 463 aa4.12□□□□□ -1.75
XRN1-210ENST00000472697 FAM205CA6NFA0 338 aa4.12□□□□□ -1.75
XRN1-210ENST00000472697 USP17L5A8MUK1 530 aa4.12□□□□□ -1.75
XRN1-210ENST00000472697 MARSP56192 900 aaKnown RBP4.12□□□□□ -1.75
XRN1-210ENST00000472697 DOK7Q18PE1 504 aa4.12□□□□□ -1.75
XRN1-210ENST00000472697 OCSTAMPQ9BR26 566 aa4.12□□□□□ -1.75
XRN1-210ENST00000472697 STAU1O95793 577 aaKnown RBP4.11□□□□□ -1.75
XRN1-210ENST00000472697 SEMA3FQ13275 785 aa4.11□□□□□ -1.75
XRN1-210ENST00000472697 PTK7Q13308 1070 aa4.11□□□□□ -1.75
XRN1-210ENST00000472697 MTMR2Q13614 643 aa4.11□□□□□ -1.75
XRN1-210ENST00000472697 BACH2Q9BYV9 841 aa4.11□□□□□ -1.75
XRN1-210ENST00000472697 MKRN1Q9UHC7 482 aaKnown RBP4.11□□□□□ -1.75
XRN1-210ENST00000472697 SLC34A2O95436 690 aa4.11□□□□□ -1.75
XRN1-210ENST00000472697 SKIP12755 728 aa4.11□□□□□ -1.75
XRN1-210ENST00000472697 SLFNL1Q499Z3 407 aa4.11□□□□□ -1.75
XRN1-210ENST00000472697 TATDN2Q93075 761 aa4.11□□□□□ -1.75
XRN1-210ENST00000472697 DNAJC2Q99543 621 aaKnown RBP4.11□□□□□ -1.75
XRN1-210ENST00000472697 ZSWIM6Q9HCJ5 1215 aa4.11□□□□□ -1.75
XRN1-210ENST00000472697 USP17L15C9J2P7 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 USP17L10C9JJH3 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 USP17L13C9JLJ4 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 USP17L12C9JPN9 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 USP17L11C9JVI0 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 USP17L21D6R901 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 USP17L18D6R9N7 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 USP17L22D6RA61 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 USP17L17D6RBQ6 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 USP17L19D6RCP7 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 USP17L20D6RJB6 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 GCGRP47871 477 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 USP17L24Q0WX57 530 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 WASHC4Q2M389 1173 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 CCDC125Q86Z20 511 aa4.1□□□□□ -1.75
XRN1-210ENST00000472697 H3BRB1 525 aa4.09□□□□□ -1.75
XRN1-210ENST00000472697 RASA1P20936 1047 aa4.09□□□□□ -1.75
XRN1-210ENST00000472697 DPYDQ12882 1025 aa4.09□□□□□ -1.75
XRN1-210ENST00000472697 RNF19BQ6ZMZ0 732 aa4.09□□□□□ -1.75
XRN1-210ENST00000472697 FBXO33Q7Z6M2 555 aa4.09□□□□□ -1.75
XRN1-210ENST00000472697 WWC1Q8IX03 1113 aa4.09□□□□□ -1.75
XRN1-210ENST00000472697 TUT1Q9H6E5 874 aaKnown RBP4.09□□□□□ -1.75
XRN1-210ENST00000472697 LHX6Q9UPM6 363 aa4.09□□□□□ -1.75
XRN1-210ENST00000472697 TNNI2P48788 182 aa4.09□□□□□ -1.75
XRN1-210ENST00000472697 DIXDC1Q155Q3 683 aa4.09□□□□□ -1.75
XRN1-210ENST00000472697 TUSC1Q2TAM9 212 aa4.09□□□□□ -1.75
XRN1-210ENST00000472697 SWT1Q5T5J6 900 aaKnown RBP4.09□□□□□ -1.75
XRN1-210ENST00000472697 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.08□□□□□ -1.76
XRN1-210ENST00000472697 ATP2B4P23634 1241 aa4.08□□□□□ -1.76
XRN1-210ENST00000472697 NAALADL2Q58DX5 795 aa4.08□□□□□ -1.76
XRN1-210ENST00000472697 PRPF38BQ5VTL8 546 aaKnown RBP4.08□□□□□ -1.76
XRN1-210ENST00000472697 RIMBP2O15034 1052 aa4.08□□□□□ -1.76
XRN1-210ENST00000472697 DNAJB2P25686 324 aa4.08□□□□□ -1.76
XRN1-210ENST00000472697 OCLNQ16625 522 aa4.08□□□□□ -1.76
XRN1-210ENST00000472697 BLOC1S3Q6QNY0 202 aa4.08□□□□□ -1.76
XRN1-210ENST00000472697 DKK1O94907 266 aa4.08□□□□□ -1.76
XRN1-210ENST00000472697 HELBQ8NG08 1087 aaPredicted RBP4.08□□□□□ -1.76
XRN1-210ENST00000472697 CCER1Q8TC90 406 aaPredicted RBP4.08□□□□□ -1.76
XRN1-210ENST00000472697 ERBB3P21860 1342 aa4.07□□□□□ -1.76
XRN1-210ENST00000472697 ARHGAP4P98171 946 aa4.07□□□□□ -1.76
XRN1-210ENST00000472697 NAA30Q147X3 362 aaPredicted RBP4.07□□□□□ -1.76
XRN1-210ENST00000472697 SULF1Q8IWU6 871 aa4.07□□□□□ -1.76
XRN1-210ENST00000472697 OGFOD1Q8N543 542 aa4.07□□□□□ -1.76
XRN1-210ENST00000472697 RNF40O75150 1001 aa4.07□□□□□ -1.76
XRN1-210ENST00000472697 PSEN2P49810 448 aa4.07□□□□□ -1.76
XRN1-210ENST00000472697 GPR153Q6NV75 609 aa4.07□□□□□ -1.76
XRN1-210ENST00000472697 RBM27Q9P2N5 1060 aaKnown RBP4.07□□□□□ -1.76
XRN1-210ENST00000472697 DNMT3AQ9Y6K1 912 aaPredicted RBP4.07□□□□□ -1.76
XRN1-210ENST00000472697 RB1CC1Q8TDY2 1594 aa4.06□□□□□ -1.76
XRN1-210ENST00000472697 SFI1A8K8P3 1242 aa4.06□□□□□ -1.76
XRN1-210ENST00000472697 SOCS7O14512 581 aa4.06□□□□□ -1.76
XRN1-210ENST00000472697 HDLBPQ00341 1268 aaKnown RBP4.06□□□□□ -1.76
XRN1-210ENST00000472697 RAD51AP2Q09MP3 1159 aa4.06□□□□□ -1.76
XRN1-210ENST00000472697 SLF2Q8IX21 1173 aa4.06□□□□□ -1.76
XRN1-210ENST00000472697 ZNF687Q8N1G0 1237 aa4.06□□□□□ -1.76
XRN1-210ENST00000472697 CDCA7Q9BWT1 371 aaPredicted RBP4.06□□□□□ -1.76
XRN1-210ENST00000472697 PRM3Q9NNZ6 103 aa4.06□□□□□ -1.76
XRN1-210ENST00000472697 AXIN2Q9Y2T1 843 aa4.06□□□□□ -1.76
XRN1-210ENST00000472697 DHX38Q92620 1227 aaKnown RBP4.06□□□□□ -1.76
XRN1-210ENST00000472697 WWC3Q9ULE0 1092 aa4.06□□□□□ -1.76
XRN1-210ENST00000472697 SLC27A5Q9Y2P5 690 aa4.06□□□□□ -1.76
XRN1-210ENST00000472697 FAM196BA6NMK8 535 aa4.05□□□□□ -1.76
XRN1-210ENST00000472697 ARID4AP29374 1257 aaPredicted RBP4.05□□□□□ -1.76
XRN1-210ENST00000472697 POTEEQ6S8J3 1075 aa4.05□□□□□ -1.76
XRN1-210ENST00000472697 SREK1Q8WXA9 508 aaKnown RBP4.05□□□□□ -1.76
XRN1-210ENST00000472697 TRIM6-TRIM34B2RNG4 842 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms