RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 HSP90AB2PQ58FF8 381 aa10.37□□□□□ -0.75
CD47-204ENST00000471694 SPINK5Q9NQ38 1064 aaPredicted RBP10.37□□□□□ -0.75
CD47-204ENST00000471694 TRIM21P19474 475 aaKnown RBP10.37□□□□□ -0.75
CD47-204ENST00000471694 IFT140Q96RY7 1462 aa10.37□□□□□ -0.75
CD47-204ENST00000471694 RAI14Q9P0K7 980 aa10.37□□□□□ -0.75
CD47-204ENST00000471694 IPO7O95373 1038 aaKnown RBP10.36□□□□□ -0.75
CD47-204ENST00000471694 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
CD47-204ENST00000471694 NEBLO76041 1014 aa10.36□□□□□ -0.75
CD47-204ENST00000471694 CEBPAP49715 358 aaPredicted RBP10.36□□□□□ -0.75
CD47-204ENST00000471694 GOLGA6L19H0YKK7 550 aa10.36□□□□□ -0.75
CD47-204ENST00000471694 FSD1Q9BTV5 496 aa10.36□□□□□ -0.75
CD47-204ENST00000471694 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
CD47-204ENST00000471694 ST5P78524 1137 aa10.35□□□□□ -0.75
CD47-204ENST00000471694 FYCO1Q9BQS8 1478 aa10.35□□□□□ -0.75
CD47-204ENST00000471694 ECM2O94769 699 aaPredicted RBP10.35□□□□□ -0.75
CD47-204ENST00000471694 DRC1Q96MC2 740 aa10.35□□□□□ -0.75
CD47-204ENST00000471694 ZNF692Q9BU19 519 aaPredicted RBP10.35□□□□□ -0.75
CD47-204ENST00000471694 RRBP1Q9P2E9 1410 aaKnown RBP10.35□□□□□ -0.75
CD47-204ENST00000471694 LMTK3Q96Q04 1460 aa10.35□□□□□ -0.75
CD47-204ENST00000471694 SOGA3Q5TF21 947 aa10.35□□□□□ -0.75
CD47-204ENST00000471694 MSH6P52701 1360 aa10.35□□□□□ -0.75
CD47-204ENST00000471694 BTBD11A6QL63 1104 aa10.35□□□□□ -0.75
CD47-204ENST00000471694 SYCP1Q15431 976 aa10.35□□□□□ -0.75
CD47-204ENST00000471694 CCDC70Q6NSX1 233 aa10.34□□□□□ -0.75
CD47-204ENST00000471694 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
CD47-204ENST00000471694 BECN2A8MW95 431 aa10.34□□□□□ -0.75
CD47-204ENST00000471694 PTCD1O75127 700 aaKnown RBP10.34□□□□□ -0.75
CD47-204ENST00000471694 E9PSI1 815 aa10.34□□□□□ -0.75
CD47-204ENST00000471694 MYO1BO43795 1136 aa10.34□□□□□ -0.75
CD47-204ENST00000471694 ZHX3Q9H4I2 956 aa10.34□□□□□ -0.75
CD47-204ENST00000471694 MYOM3Q5VTT5 1437 aa10.34□□□□□ -0.75
CD47-204ENST00000471694 MYBBP1AQ9BQG0 1328 aaKnown RBP10.34□□□□□ -0.75
CD47-204ENST00000471694 NACAP1Q9BZK3 213 aa10.34□□□□□ -0.75
CD47-204ENST00000471694 CCDC85AQ96PX6 553 aaPredicted RBP10.34□□□□□ -0.75
CD47-204ENST00000471694 NINLQ9Y2I6 1382 aa10.34□□□□□ -0.75
CD47-204ENST00000471694 C6orf229H3BNL8 230 aa10.34□□□□□ -0.75
CD47-204ENST00000471694 MAP3K9P80192 1104 aa10.34□□□□□ -0.75
CD47-204ENST00000471694 KCNH5Q8NCM2 988 aa10.34□□□□□ -0.75
CD47-204ENST00000471694 PNISRQ8TF01 805 aaKnown RBP10.34□□□□□ -0.75
CD47-204ENST00000471694 SNAPC4Q5SXM2 1469 aa10.33□□□□□ -0.76
CD47-204ENST00000471694 OFD1O75665 1012 aa10.33□□□□□ -0.76
CD47-204ENST00000471694 NF2P35240 595 aa10.33□□□□□ -0.76
CD47-204ENST00000471694 CCAR2Q8N163 923 aaKnown RBP10.33□□□□□ -0.76
CD47-204ENST00000471694 LMOD1P29536 600 aaPredicted RBP10.33□□□□□ -0.76
CD47-204ENST00000471694 ERC1Q8IUD2 1116 aa10.33□□□□□ -0.76
CD47-204ENST00000471694 USP5P45974 858 aa10.33□□□□□ -0.76
CD47-204ENST00000471694 PDCL3Q9H2J4 239 aa10.33□□□□□ -0.76
CD47-204ENST00000471694 ATP6V1DQ9Y5K8 247 aa10.33□□□□□ -0.76
CD47-204ENST00000471694 SIL1Q9H173 461 aa10.32□□□□□ -0.76
CD47-204ENST00000471694 ZNF644Q9H582 1327 aaPredicted RBP10.32□□□□□ -0.76
CD47-204ENST00000471694 RFX1P22670 979 aa10.32□□□□□ -0.76
CD47-204ENST00000471694 RUNDC1Q96C34 613 aa10.32□□□□□ -0.76
CD47-204ENST00000471694 LRP2BPQ9P2M1 347 aa10.32□□□□□ -0.76
CD47-204ENST00000471694 RDXP35241 583 aaKnown RBP10.32□□□□□ -0.76
CD47-204ENST00000471694 PPP4R3AQ6IN85 833 aa10.32□□□□□ -0.76
CD47-204ENST00000471694 POLR3DP05423 398 aaPredicted RBP10.32□□□□□ -0.76
CD47-204ENST00000471694 DNAI2Q9GZS0 605 aa10.32□□□□□ -0.76
CD47-204ENST00000471694 CAVIN4Q5BKX8 364 aa10.31□□□□□ -0.76
CD47-204ENST00000471694 SLC52A1Q9NWF4 448 aa10.31□□□□□ -0.76
CD47-204ENST00000471694 TNIP1Q15025 636 aa10.31□□□□□ -0.76
CD47-204ENST00000471694 CD109Q6YHK3 1445 aa10.31□□□□□ -0.76
CD47-204ENST00000471694 APAF1O14727 1248 aa10.31□□□□□ -0.76
CD47-204ENST00000471694 ATP2B1P20020 1258 aa10.31□□□□□ -0.76
CD47-204ENST00000471694 FAM161AQ3B820 660 aa10.31□□□□□ -0.76
CD47-204ENST00000471694 CABP1Q9NZU7 370 aa10.31□□□□□ -0.76
CD47-204ENST00000471694 CNTROBQ8N137 903 aa10.31□□□□□ -0.76
CD47-204ENST00000471694 NESP48681 1621 aa10.3□□□□□ -0.76
CD47-204ENST00000471694 HDGFL1Q5TGJ6 251 aa10.3□□□□□ -0.76
CD47-204ENST00000471694 SULT6B1Q6IMI4 303 aa10.3□□□□□ -0.76
CD47-204ENST00000471694 BICD2Q8TD16 824 aa10.3□□□□□ -0.76
CD47-204ENST00000471694 FEZ1Q99689 392 aa10.3□□□□□ -0.76
CD47-204ENST00000471694 KRT28Q7Z3Y7 464 aa10.3□□□□□ -0.76
CD47-204ENST00000471694 ACSBG1Q96GR2 724 aa10.3□□□□□ -0.76
CD47-204ENST00000471694 CCDC69A6NI79 296 aa10.3□□□□□ -0.76
CD47-204ENST00000471694 TXLNAP40222 546 aa10.3□□□□□ -0.76
CD47-204ENST00000471694 FKBP4Q02790 459 aaKnown RBP eCLIP10.3□□□□□ -0.76
CD47-204ENST00000471694 CFAP70Q5T0N1 1121 aa10.29□□□□□ -0.76
CD47-204ENST00000471694 ZSCAN25Q6NSZ9 544 aa10.29□□□□□ -0.76
CD47-204ENST00000471694 CLASRPQ8N2M8 674 aaKnown RBP10.29□□□□□ -0.76
CD47-204ENST00000471694 TFCP2L1Q9NZI6 479 aa10.29□□□□□ -0.76
CD47-204ENST00000471694 DDX19BQ9UMR2 479 aa10.29□□□□□ -0.76
CD47-204ENST00000471694 USP47Q96K76 1375 aa10.29□□□□□ -0.76
CD47-204ENST00000471694 FOXO3O43524 673 aa10.29□□□□□ -0.76
CD47-204ENST00000471694 TDO2P48775 406 aa10.29□□□□□ -0.76
CD47-204ENST00000471694 DZIP1Q86YF9 867 aaKnown RBP10.29□□□□□ -0.76
CD47-204ENST00000471694 NUP133Q8WUM0 1156 aa10.29□□□□□ -0.76
CD47-204ENST00000471694 REC8O95072 547 aa10.29□□□□□ -0.76
CD47-204ENST00000471694 ABCF2Q9UG63 623 aa10.29□□□□□ -0.76
CD47-204ENST00000471694 NOP58Q9Y2X3 529 aaKnown RBP10.29□□□□□ -0.76
CD47-204ENST00000471694 PARP3Q9Y6F1 533 aa10.29□□□□□ -0.76
CD47-204ENST00000471694 SURF6O75683 361 aaKnown RBP10.29□□□□□ -0.76
CD47-204ENST00000471694 CCER2I3L3R5 266 aa10.28□□□□□ -0.76
CD47-204ENST00000471694 DESP17661 470 aa10.28□□□□□ -0.76
CD47-204ENST00000471694 GPR162Q16538 588 aa10.28□□□□□ -0.76
CD47-204ENST00000471694 MPHOSPH6Q99547 160 aaKnown RBP10.28□□□□□ -0.76
CD47-204ENST00000471694 STK32BQ9NY57 414 aa10.28□□□□□ -0.76
CD47-204ENST00000471694 VPS37CA5D8V6 355 aaPredicted RBP10.28□□□□□ -0.76
CD47-204ENST00000471694 PLEKHH2Q8IVE3 1493 aa10.28□□□□□ -0.76
CD47-204ENST00000471694 PATL2C9JE40 543 aaKnown RBP10.28□□□□□ -0.76
CD47-204ENST00000471694 CADPS2Q86UW7 1296 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms