RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 MORN1Q5T089 497 aa11.18□□□□□ -0.62
SMC5-202ENST00000471372 SLC27A5Q9Y2P5 690 aa11.18□□□□□ -0.62
SMC5-202ENST00000471372 FBXO45P0C2W1 286 aa11.17□□□□□ -0.62
SMC5-202ENST00000471372 CCDC27Q2M243 656 aa11.17□□□□□ -0.62
SMC5-202ENST00000471372 KANK4Q5T7N3 995 aaPredicted RBP11.17□□□□□ -0.62
SMC5-202ENST00000471372 DESI1Q6ICB0 168 aa11.17□□□□□ -0.62
SMC5-202ENST00000471372 SND1Q7KZF4 910 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMC5-202ENST00000471372 VPS9D1Q9Y2B5 631 aa11.17□□□□□ -0.62
SMC5-202ENST00000471372 KMT5BQ4FZB7 885 aa11.16□□□□□ -0.62
SMC5-202ENST00000471372 LYPD8Q6UX82 237 aa11.16□□□□□ -0.62
SMC5-202ENST00000471372 ZMIZ1Q9ULJ6 1067 aa11.15□□□□□ -0.62
SMC5-202ENST00000471372 RNF19BQ6ZMZ0 732 aa11.14□□□□□ -0.63
SMC5-202ENST00000471372 ACTN4O43707 911 aaKnown RBP11.13□□□□□ -0.63
SMC5-202ENST00000471372 Q3C1V9 767 aa11.13□□□□□ -0.63
SMC5-202ENST00000471372 LAPTM4BQ86VI4 370 aa11.13□□□□□ -0.63
SMC5-202ENST00000471372 STK32AQ8WU08 396 aa11.13□□□□□ -0.63
SMC5-202ENST00000471372 ZBBXA8MT70 800 aa11.12□□□□□ -0.63
SMC5-202ENST00000471372 TMEM164Q5U3C3 297 aa11.12□□□□□ -0.63
SMC5-202ENST00000471372 BLOC1S3Q6QNY0 202 aa11.12□□□□□ -0.63
SMC5-202ENST00000471372 USP17L3A6NCW0 530 aa11.11□□□□□ -0.63
SMC5-202ENST00000471372 USP17L4A6NCW7 530 aa11.11□□□□□ -0.63
SMC5-202ENST00000471372 ELOAQ14241 798 aaKnown RBP11.11□□□□□ -0.63
SMC5-202ENST00000471372 USP17L2Q6R6M4 530 aa11.11□□□□□ -0.63
SMC5-202ENST00000471372 USP17L1Q7RTZ2 530 aa11.11□□□□□ -0.63
SMC5-202ENST00000471372 ZFRQ96KR1 1074 aaKnown RBP11.11□□□□□ -0.63
SMC5-202ENST00000471372 FKBPLQ9UIM3 349 aa11.11□□□□□ -0.63
SMC5-202ENST00000471372 GNEQ9Y223 722 aaKnown RBP11.11□□□□□ -0.63
SMC5-202ENST00000471372 SKIP12755 728 aa11.1□□□□□ -0.63
SMC5-202ENST00000471372 NOVA2Q9UNW9 492 aaKnown RBP11.1□□□□□ -0.63
SMC5-202ENST00000471372 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
SMC5-202ENST00000471372 FAM174AQ8TBP5 190 aa11.09□□□□□ -0.63
SMC5-202ENST00000471372 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
SMC5-202ENST00000471372 MAP10Q9P2G4 905 aa11.09□□□□□ -0.63
SMC5-202ENST00000471372 USP17L5A8MUK1 530 aa11.08□□□□□ -0.64
SMC5-202ENST00000471372 BHMG1C9JSJ3 638 aaPredicted RBP11.08□□□□□ -0.64
SMC5-202ENST00000471372 E9PSI1 815 aa11.08□□□□□ -0.64
SMC5-202ENST00000471372 F12P00748 615 aaPredicted RBP11.08□□□□□ -0.64
SMC5-202ENST00000471372 PTPN5P54829 565 aa11.08□□□□□ -0.64
SMC5-202ENST00000471372 DEPDC4Q8N2C3 294 aa11.08□□□□□ -0.64
SMC5-202ENST00000471372 USB1Q9BQ65 265 aaKnown RBP11.08□□□□□ -0.64
SMC5-202ENST00000471372 B4GALNT3Q6L9W6 998 aa11.07□□□□□ -0.64
SMC5-202ENST00000471372 PHLDB3Q6NSJ2 640 aa11.07□□□□□ -0.64
SMC5-202ENST00000471372 AMOTL2Q9Y2J4 779 aa11.07□□□□□ -0.64
SMC5-202ENST00000471372 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
SMC5-202ENST00000471372 BRICD5Q6PL45 260 aa11.05□□□□□ -0.64
SMC5-202ENST00000471372 PLEKHM2Q8IWE5 1019 aa11.05□□□□□ -0.64
SMC5-202ENST00000471372 MRPL50Q8N5N7 158 aaKnown RBP11.05□□□□□ -0.64
SMC5-202ENST00000471372 CRTC2Q53ET0 693 aaPredicted RBP11.04□□□□□ -0.64
SMC5-202ENST00000471372 TXNDC2Q86VQ3 553 aa11.04□□□□□ -0.64
SMC5-202ENST00000471372 LRCH3Q96II8 777 aa11.04□□□□□ -0.64
SMC5-202ENST00000471372 SLAIN2Q9P270 581 aa11.04□□□□□ -0.64
SMC5-202ENST00000471372 USP17L15C9J2P7 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 USP17L10C9JJH3 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 USP17L13C9JLJ4 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 USP17L12C9JPN9 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 USP17L11C9JVI0 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 USP17L21D6R901 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 USP17L18D6R9N7 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 USP17L22D6RA61 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 USP17L17D6RBQ6 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 USP17L19D6RCP7 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 USP17L20D6RJB6 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 USP17L24Q0WX57 530 aa11.03□□□□□ -0.64
SMC5-202ENST00000471372 ZC3H4Q9UPT8 1303 aaKnown RBP11.03□□□□□ -0.64
SMC5-202ENST00000471372 FAM196BA6NMK8 535 aa11.02□□□□□ -0.65
SMC5-202ENST00000471372 THSD4Q6ZMP0 1018 aa11.02□□□□□ -0.65
SMC5-202ENST00000471372 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.65
SMC5-202ENST00000471372 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.02□□□□□ -0.65
SMC5-202ENST00000471372 MKRN1Q9UHC7 482 aaKnown RBP11.02□□□□□ -0.65
SMC5-202ENST00000471372 SALL2Q9Y467 1007 aaPredicted RBP11.02□□□□□ -0.65
SMC5-202ENST00000471372 JUNDP17535 347 aa11.01□□□□□ -0.65
SMC5-202ENST00000471372 PTPRNQ16849 979 aa11.01□□□□□ -0.65
SMC5-202ENST00000471372 SCUBE3Q8IX30 993 aa11.01□□□□□ -0.65
SMC5-202ENST00000471372 WNT2BQ93097 391 aa11.01□□□□□ -0.65
SMC5-202ENST00000471372 THAP11Q96EK4 314 aa11.01□□□□□ -0.65
SMC5-202ENST00000471372 CTHP32929 405 aa11□□□□□ -0.65
SMC5-202ENST00000471372 NCOA4Q13772 614 aa11□□□□□ -0.65
SMC5-202ENST00000471372 PRR14Q9BWN1 585 aa11□□□□□ -0.65
SMC5-202ENST00000471372 CEP126Q9P2H0 1117 aa11□□□□□ -0.65
SMC5-202ENST00000471372 SSFA2P28290 1259 aa10.99□□□□□ -0.65
SMC5-202ENST00000471372 FAM69CQ0P6D2 419 aa10.99□□□□□ -0.65
SMC5-202ENST00000471372 PTK7Q13308 1070 aa10.99□□□□□ -0.65
SMC5-202ENST00000471372 OCSTAMPQ9BR26 566 aa10.99□□□□□ -0.65
SMC5-202ENST00000471372 FMNL1O95466 1100 aaPredicted RBP10.98□□□□□ -0.65
SMC5-202ENST00000471372 RASA1P20936 1047 aa10.98□□□□□ -0.65
SMC5-202ENST00000471372 APLP1P51693 650 aa10.98□□□□□ -0.65
SMC5-202ENST00000471372 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
SMC5-202ENST00000471372 LARP1Q6PKG0 1096 aaKnown RBP10.98□□□□□ -0.65
SMC5-202ENST00000471372 IGSF3O75054 1194 aa10.97□□□□□ -0.65
SMC5-202ENST00000471372 PHTF2Q8N3S3 785 aa10.97□□□□□ -0.65
SMC5-202ENST00000471372 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
SMC5-202ENST00000471372 RNF135Q8IUD6 432 aa10.96□□□□□ -0.65
SMC5-202ENST00000471372 PLPP7Q8NBV4 271 aa10.96□□□□□ -0.65
SMC5-202ENST00000471372 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.65
SMC5-202ENST00000471372 PCDHB9Q9Y5E1 797 aa10.96□□□□□ -0.65
SMC5-202ENST00000471372 UNCXA6NJT0 531 aa10.95□□□□□ -0.66
SMC5-202ENST00000471372 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
SMC5-202ENST00000471372 ARID4AP29374 1257 aaPredicted RBP10.95□□□□□ -0.66
SMC5-202ENST00000471372 PTK2Q05397 1052 aa10.95□□□□□ -0.66
SMC5-202ENST00000471372 PDXDC2PQ6P474 469 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms