RNA–Protein interactions for RNA: ENST00000470494.5

CDH23-210, Transcript of cadherin related 23, humanhuman

TSL 3

Gene CDH23, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-210ENST00000470494 TRPC5Q9UL62 973 aaPredicted RBP23.55■■□□□ 1.36
CDH23-210ENST00000470494 POLR3AO14802 1390 aaPredicted RBP23.54■■□□□ 1.36
CDH23-210ENST00000470494 CRYBG1Q9Y4K1 1723 aa23.54■■□□□ 1.36
CDH23-210ENST00000470494 CDK12Q9NYV4 1490 aaPredicted RBP23.54■■□□□ 1.36
CDH23-210ENST00000470494 RGS12O14924 1447 aa23.52■■□□□ 1.36
CDH23-210ENST00000470494 ATRNO75882 1429 aa23.52■■□□□ 1.36
CDH23-210ENST00000470494 BCL9LQ86UU0 1499 aa23.52■■□□□ 1.36
CDH23-210ENST00000470494 PLEKHG3A1L390 1219 aa23.52■■□□□ 1.36
CDH23-210ENST00000470494 NWD2Q9ULI1 1742 aa23.51■■□□□ 1.35
CDH23-210ENST00000470494 PHRF1Q9P1Y6 1649 aaKnown RBP23.51■■□□□ 1.35
CDH23-210ENST00000470494 NUTM2GQ5VZR2 741 aa23.5■■□□□ 1.35
CDH23-210ENST00000470494 SLIT2O94813 1529 aa23.49■■□□□ 1.35
CDH23-210ENST00000470494 CABP1Q9NZU7 370 aa23.48■■□□□ 1.35
CDH23-210ENST00000470494 COL14A1Q05707 1796 aaKnown RBP23.47■■□□□ 1.35
CDH23-210ENST00000470494 UNC5CLQ8IV45 518 aa23.47■■□□□ 1.35
CDH23-210ENST00000470494 AKAP12Q02952 1782 aa23.45■■□□□ 1.34
CDH23-210ENST00000470494 ABTB2Q8N961 1025 aa23.45■■□□□ 1.34
CDH23-210ENST00000470494 ATAD2Q6PL18 1390 aa23.44■■□□□ 1.34
CDH23-210ENST00000470494 SBNO2Q9Y2G9 1366 aa23.44■■□□□ 1.34
CDH23-210ENST00000470494 CCDC9Q9Y3X0 531 aaKnown RBP23.44■■□□□ 1.34
CDH23-210ENST00000470494 NRAPQ86VF7 1730 aa23.44■■□□□ 1.34
CDH23-210ENST00000470494 USP6P35125 1406 aa23.43■■□□□ 1.34
CDH23-210ENST00000470494 FAM83GA6ND36 823 aa23.43■■□□□ 1.34
CDH23-210ENST00000470494 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
CDH23-210ENST00000470494 GJD4Q96KN9 370 aaPredicted RBP23.42■■□□□ 1.34
CDH23-210ENST00000470494 PRDM11Q9NQV5 511 aa23.42■■□□□ 1.34
CDH23-210ENST00000470494 GLI3P10071 1580 aa23.42■■□□□ 1.34
CDH23-210ENST00000470494 NRKQ7Z2Y5 1582 aa23.41■■□□□ 1.34
CDH23-210ENST00000470494 CCER1Q8TC90 406 aaPredicted RBP23.41■■□□□ 1.34
CDH23-210ENST00000470494 BTG4Q9NY30 223 aa23.4■■□□□ 1.34
CDH23-210ENST00000470494 KIAA0232Q92628 1395 aa23.39■■□□□ 1.33
CDH23-210ENST00000470494 ZC3H6P61129 1189 aaKnown RBP23.38■■□□□ 1.33
CDH23-210ENST00000470494 BRD4O60885 1362 aaPredicted RBP23.38■■□□□ 1.33
CDH23-210ENST00000470494 PIK3C2AO00443 1686 aa23.38■■□□□ 1.33
CDH23-210ENST00000470494 MON2Q7Z3U7 1717 aa23.37■■□□□ 1.33
CDH23-210ENST00000470494 ST20-MTHFSA0A0A6YYL1 179 aa23.36■■□□□ 1.33
CDH23-210ENST00000470494 CHRNA2Q15822 529 aa23.36■■□□□ 1.33
CDH23-210ENST00000470494 VPS72Q15906 364 aa23.36■■□□□ 1.33
CDH23-210ENST00000470494 NLRP13Q86W25 1043 aa23.36■■□□□ 1.33
CDH23-210ENST00000470494 TMC1Q8TDI8 760 aa23.36■■□□□ 1.33
CDH23-210ENST00000470494 BRWD3Q6RI45 1802 aa23.36■■□□□ 1.33
CDH23-210ENST00000470494 NLRP6P59044 892 aa23.34■■□□□ 1.33
CDH23-210ENST00000470494 UPF1Q92900 1129 aaKnown RBP eCLIP23.34■■□□□ 1.33
CDH23-210ENST00000470494 KTN1Q86UP2 1357 aaKnown RBP23.34■■□□□ 1.33
CDH23-210ENST00000470494 USP47Q96K76 1375 aa23.34■■□□□ 1.33
CDH23-210ENST00000470494 USP19O94966 1318 aa23.33■■□□□ 1.33
CDH23-210ENST00000470494 A0A0G2JS52 829 aa23.33■■□□□ 1.33
CDH23-210ENST00000470494 ZBTB7CA1YPR0 619 aa23.33■■□□□ 1.33
CDH23-210ENST00000470494 MYT1Q01538 1121 aa23.33■■□□□ 1.33
CDH23-210ENST00000470494 TIMELESSQ9UNS1 1208 aa23.33■■□□□ 1.33
CDH23-210ENST00000470494 ZNF692Q9BU19 519 aaPredicted RBP23.32■■□□□ 1.32
CDH23-210ENST00000470494 STRN4Q9NRL3 753 aa23.31■■□□□ 1.32
CDH23-210ENST00000470494 CPSF1Q10570 1443 aaKnown RBP23.31■■□□□ 1.32
CDH23-210ENST00000470494 SSH2Q76I76 1423 aa23.31■■□□□ 1.32
CDH23-210ENST00000470494 TTC21BQ7Z4L5 1316 aa23.3■■□□□ 1.32
CDH23-210ENST00000470494 TESK2Q96S53 571 aa23.29■■□□□ 1.32
CDH23-210ENST00000470494 SLIT3O75094 1523 aa23.28■■□□□ 1.32
CDH23-210ENST00000470494 GCP02774 474 aa23.28■■□□□ 1.32
CDH23-210ENST00000470494 HDGFL2Q7Z4V5 671 aaPredicted RBP23.28■■□□□ 1.32
CDH23-210ENST00000470494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.27■■□□□ 1.32
CDH23-210ENST00000470494 SEPT12Q8IYM1 358 aa23.27■■□□□ 1.32
CDH23-210ENST00000470494 SLC12A5Q9H2X9 1139 aa23.27■■□□□ 1.32
CDH23-210ENST00000470494 LMO7Q8WWI1 1683 aa23.27■■□□□ 1.32
CDH23-210ENST00000470494 TTC21AQ8NDW8 1320 aa23.27■■□□□ 1.32
CDH23-210ENST00000470494 CPDO75976 1380 aa23.27■■□□□ 1.31
CDH23-210ENST00000470494 CD163L1Q9NR16 1453 aa23.26■■□□□ 1.31
CDH23-210ENST00000470494 SOX12O15370 315 aa23.26■■□□□ 1.31
CDH23-210ENST00000470494 FAM98CQ17RN3 349 aaKnown RBP23.26■■□□□ 1.31
CDH23-210ENST00000470494 EP400Q96L91 3159 aa23.25■■□□□ 1.31
CDH23-210ENST00000470494 EVA1CP58658 441 aa23.25■■□□□ 1.31
CDH23-210ENST00000470494 SLC24A1O60721 1099 aa23.24■■□□□ 1.31
CDH23-210ENST00000470494 TERF2IPQ9NYB0 399 aa23.24■■□□□ 1.31
CDH23-210ENST00000470494 CAMTA1Q9Y6Y1 1673 aa23.24■■□□□ 1.31
CDH23-210ENST00000470494 SPATA31A5Q5VU36 1347 aa23.24■■□□□ 1.31
CDH23-210ENST00000470494 SPATA31A7Q8IWB4 1347 aa23.24■■□□□ 1.31
CDH23-210ENST00000470494 TMF1P82094 1093 aa23.23■■□□□ 1.31
CDH23-210ENST00000470494 A0A1W2PP64 1363 aa23.23■■□□□ 1.31
CDH23-210ENST00000470494 PUS7Q96PZ0 661 aaKnown RBP23.22■■□□□ 1.31
CDH23-210ENST00000470494 RGPD5Q99666 1765 aa23.22■■□□□ 1.31
CDH23-210ENST00000470494 USP35Q9P2H5 1018 aa23.21■■□□□ 1.31
CDH23-210ENST00000470494 NINLQ9Y2I6 1382 aa23.21■■□□□ 1.31
CDH23-210ENST00000470494 EDC4Q6P2E9 1401 aaKnown RBP23.21■■□□□ 1.31
CDH23-210ENST00000470494 USP54Q70EL1 1684 aa23.19■■□□□ 1.3
CDH23-210ENST00000470494 NME9Q86XW9 330 aa23.19■■□□□ 1.3
CDH23-210ENST00000470494 KCNH5Q8NCM2 988 aa23.19■■□□□ 1.3
CDH23-210ENST00000470494 ZRANB1Q9UGI0 708 aa23.19■■□□□ 1.3
CDH23-210ENST00000470494 THSD7AQ9UPZ6 1657 aa23.19■■□□□ 1.3
CDH23-210ENST00000470494 COL5A2P05997 1499 aaPredicted RBP23.18■■□□□ 1.3
CDH23-210ENST00000470494 SPATA31A1Q5TZJ5 1347 aa23.18■■□□□ 1.3
CDH23-210ENST00000470494 KRT27Q7Z3Y8 459 aa23.18■■□□□ 1.3
CDH23-210ENST00000470494 LTN1O94822 1766 aa23.18■■□□□ 1.3
CDH23-210ENST00000470494 COL18A1P39060 1754 aa23.17■■□□□ 1.3
CDH23-210ENST00000470494 ONECUT3O60422 494 aaPredicted RBP23.17■■□□□ 1.3
CDH23-210ENST00000470494 LARP1Q6PKG0 1096 aaKnown RBP23.17■■□□□ 1.3
CDH23-210ENST00000470494 NFAT5O94916 1531 aa23.17■■□□□ 1.3
CDH23-210ENST00000470494 AATKQ6ZMQ8 1374 aa23.15■■□□□ 1.3
CDH23-210ENST00000470494 CDCA8Q53HL2 280 aa23.14■■□□□ 1.29
CDH23-210ENST00000470494 USP31Q70CQ4 1352 aa23.13■■□□□ 1.29
CDH23-210ENST00000470494 MYOM1P52179 1685 aa23.13■■□□□ 1.29
CDH23-210ENST00000470494 ANKRD36BQ8N2N9 1353 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms