RNA–Protein interactions for RNA: ENST00000469159.1

NCSTN-212, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-212ENST00000469159 ADGRF5Q8IZF2 1346 aa12.15□□□□□ -0.46
NCSTN-212ENST00000469159 SIRT1Q96EB6 747 aa12.15□□□□□ -0.46
NCSTN-212ENST00000469159 RGPD8O14715 1765 aaPredicted RBP12.15□□□□□ -0.46
NCSTN-212ENST00000469159 TMEM132EQ6IEE7 984 aa12.14□□□□□ -0.47
NCSTN-212ENST00000469159 KNDC1Q76NI1 1749 aa12.14□□□□□ -0.47
NCSTN-212ENST00000469159 PDE3BQ13370 1112 aa12.13□□□□□ -0.47
NCSTN-212ENST00000469159 PMFBP1Q8TBY8 1022 aa12.13□□□□□ -0.47
NCSTN-212ENST00000469159 PRDM11Q9NQV5 511 aa12.13□□□□□ -0.47
NCSTN-212ENST00000469159 IFT172Q9UG01 1749 aa12.12□□□□□ -0.47
NCSTN-212ENST00000469159 ITGAEP38570 1179 aa12.12□□□□□ -0.47
NCSTN-212ENST00000469159 PTGER2P43116 358 aa12.12□□□□□ -0.47
NCSTN-212ENST00000469159 BARGINQ6ZT62 677 aa12.12□□□□□ -0.47
NCSTN-212ENST00000469159 NRKQ7Z2Y5 1582 aa12.12□□□□□ -0.47
NCSTN-212ENST00000469159 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
NCSTN-212ENST00000469159 SYT17Q9BSW7 474 aa12.11□□□□□ -0.47
NCSTN-212ENST00000469159 TRPM3Q9HCF6 1732 aaPredicted RBP12.11□□□□□ -0.47
NCSTN-212ENST00000469159 ALS2Q96Q42 1657 aa12.1□□□□□ -0.47
NCSTN-212ENST00000469159 PDGFDQ9GZP0 370 aaPredicted RBP12.1□□□□□ -0.47
NCSTN-212ENST00000469159 CASZ1Q86V15 1759 aa12.1□□□□□ -0.47
NCSTN-212ENST00000469159 CHD4Q14839 1912 aa12.09□□□□□ -0.47
NCSTN-212ENST00000469159 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
NCSTN-212ENST00000469159 PLSCR1O15162 318 aa12.09□□□□□ -0.47
NCSTN-212ENST00000469159 ZBTB7AO95365 584 aa12.09□□□□□ -0.47
NCSTN-212ENST00000469159 FHDC1Q9C0D6 1143 aaPredicted RBP12.09□□□□□ -0.47
NCSTN-212ENST00000469159 ANO8Q9HCE9 1232 aaPredicted RBP12.09□□□□□ -0.47
NCSTN-212ENST00000469159 STRN4Q9NRL3 753 aa12.09□□□□□ -0.47
NCSTN-212ENST00000469159 USP35Q9P2H5 1018 aa12.09□□□□□ -0.47
NCSTN-212ENST00000469159 ANKARQ7Z5J8 1434 aa12.09□□□□□ -0.47
NCSTN-212ENST00000469159 KIAA0232Q92628 1395 aa12.08□□□□□ -0.48
NCSTN-212ENST00000469159 MYOM1P52179 1685 aa12.08□□□□□ -0.48
NCSTN-212ENST00000469159 C11orf95C9JLR9 678 aaPredicted RBP12.08□□□□□ -0.48
NCSTN-212ENST00000469159 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
NCSTN-212ENST00000469159 CRYBG1Q9Y4K1 1723 aa12.08□□□□□ -0.48
NCSTN-212ENST00000469159 ACIN1Q9UKV3 1341 aaKnown RBP12.08□□□□□ -0.48
NCSTN-212ENST00000469159 ANKRD30BQ9BXX2 1392 aa12.07□□□□□ -0.48
NCSTN-212ENST00000469159 PIK3C2GO75747 1445 aa12.07□□□□□ -0.48
NCSTN-212ENST00000469159 CHRNA2Q15822 529 aa12.07□□□□□ -0.48
NCSTN-212ENST00000469159 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
NCSTN-212ENST00000469159 RGPD3A6NKT7 1758 aaPredicted RBP12.05□□□□□ -0.48
NCSTN-212ENST00000469159 RGPD4Q7Z3J3 1758 aa12.05□□□□□ -0.48
NCSTN-212ENST00000469159 SSH2Q76I76 1423 aa12.05□□□□□ -0.48
NCSTN-212ENST00000469159 EVA1CP58658 441 aa12.05□□□□□ -0.48
NCSTN-212ENST00000469159 SAFB2Q14151 953 aaKnown RBP eCLIP12.05□□□□□ -0.48
NCSTN-212ENST00000469159 RGL3Q3MIN7 710 aa12.05□□□□□ -0.48
NCSTN-212ENST00000469159 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
NCSTN-212ENST00000469159 PRAM1Q96QH2 718 aa12.05□□□□□ -0.48
NCSTN-212ENST00000469159 PAK3O75914 559 aaPredicted RBP12.04□□□□□ -0.48
NCSTN-212ENST00000469159 PROM2Q8N271 834 aa12.04□□□□□ -0.48
NCSTN-212ENST00000469159 SGIP1Q9BQI5 828 aa12.04□□□□□ -0.48
NCSTN-212ENST00000469159 THRAP3Q9Y2W1 955 aaKnown RBP12.04□□□□□ -0.48
NCSTN-212ENST00000469159 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
NCSTN-212ENST00000469159 ZC3H6P61129 1189 aaKnown RBP12.03□□□□□ -0.48
NCSTN-212ENST00000469159 LARP1Q6PKG0 1096 aaKnown RBP12.03□□□□□ -0.48
NCSTN-212ENST00000469159 BCL11BQ9C0K0 894 aaPredicted RBP12.03□□□□□ -0.48
NCSTN-212ENST00000469159 C14orf93Q9H972 538 aaKnown RBP12.03□□□□□ -0.48
NCSTN-212ENST00000469159 DHX57Q6P158 1386 aaKnown RBP12.03□□□□□ -0.48
NCSTN-212ENST00000469159 DLC1Q96QB1 1528 aa12.02□□□□□ -0.48
NCSTN-212ENST00000469159 GOLGB1Q14789 3259 aaKnown RBP12.02□□□□□ -0.48
NCSTN-212ENST00000469159 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
NCSTN-212ENST00000469159 MTFR1LQ9H019 292 aa12.02□□□□□ -0.49
NCSTN-212ENST00000469159 OVOS2A0A0G2JMS6 1433 aa12.02□□□□□ -0.49
NCSTN-212ENST00000469159 OVOS2A0A0J9YW53 1432 aa12.02□□□□□ -0.49
NCSTN-212ENST00000469159 OVOS2Q6IE36 1432 aa12.02□□□□□ -0.49
NCSTN-212ENST00000469159 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
NCSTN-212ENST00000469159 PRR36Q9H6K5 1346 aa12.01□□□□□ -0.49
NCSTN-212ENST00000469159 MAP3K5Q99683 1374 aa12.01□□□□□ -0.49
NCSTN-212ENST00000469159 PEAK1Q9H792 1746 aa12□□□□□ -0.49
NCSTN-212ENST00000469159 POGKQ9P215 609 aa12□□□□□ -0.49
NCSTN-212ENST00000469159 EIF3AQ14152 1382 aaKnown RBP12□□□□□ -0.49
NCSTN-212ENST00000469159 PARP4Q9UKK3 1724 aaKnown RBP12□□□□□ -0.49
NCSTN-212ENST00000469159 SLC15A2Q16348 729 aa11.99□□□□□ -0.49
NCSTN-212ENST00000469159 GPR162Q16538 588 aa11.99□□□□□ -0.49
NCSTN-212ENST00000469159 PTF1AQ7RTS3 328 aa11.99□□□□□ -0.49
NCSTN-212ENST00000469159 ARXQ96QS3 562 aa11.99□□□□□ -0.49
NCSTN-212ENST00000469159 STK32BQ9NY57 414 aa11.99□□□□□ -0.49
NCSTN-212ENST00000469159 PHRF1Q9P1Y6 1649 aaKnown RBP11.98□□□□□ -0.49
NCSTN-212ENST00000469159 CFAP70Q5T0N1 1121 aa11.98□□□□□ -0.49
NCSTN-212ENST00000469159 HIRIP3Q9BW71 556 aaPredicted RBP11.98□□□□□ -0.49
NCSTN-212ENST00000469159 TULP4Q9NRJ4 1543 aa11.97□□□□□ -0.49
NCSTN-212ENST00000469159 CPDO75976 1380 aa11.97□□□□□ -0.49
NCSTN-212ENST00000469159 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
NCSTN-212ENST00000469159 ATP7BP35670 1465 aa11.96□□□□□ -0.49
NCSTN-212ENST00000469159 WASLO00401 505 aaPredicted RBP11.96□□□□□ -0.49
NCSTN-212ENST00000469159 TXNRD1Q16881 649 aa11.96□□□□□ -0.49
NCSTN-212ENST00000469159 NUTM2GQ5VZR2 741 aa11.96□□□□□ -0.49
NCSTN-212ENST00000469159 SHANK3Q9BYB0 1731 aa11.96□□□□□ -0.49
NCSTN-212ENST00000469159 LMO7Q8WWI1 1683 aa11.96□□□□□ -0.5
NCSTN-212ENST00000469159 DDB1Q16531 1140 aa11.95□□□□□ -0.5
NCSTN-212ENST00000469159 BCL9O00512 1426 aa11.94□□□□□ -0.5
NCSTN-212ENST00000469159 MINK1Q8N4C8 1332 aaPredicted RBP11.94□□□□□ -0.5
NCSTN-212ENST00000469159 COL5A2P05997 1499 aaPredicted RBP11.94□□□□□ -0.5
NCSTN-212ENST00000469159 CRB1P82279 1406 aa11.94□□□□□ -0.5
NCSTN-212ENST00000469159 AATKQ6ZMQ8 1374 aa11.93□□□□□ -0.5
NCSTN-212ENST00000469159 HSPA6P17066 643 aa11.93□□□□□ -0.5
NCSTN-212ENST00000469159 MARCH10Q8NA82 808 aaPredicted RBP11.92□□□□□ -0.5
NCSTN-212ENST00000469159 TRAK1Q9UPV9 953 aa11.92□□□□□ -0.5
NCSTN-212ENST00000469159 LRRC37A3O60309 1634 aa11.92□□□□□ -0.5
NCSTN-212ENST00000469159 USP19O94966 1318 aa11.91□□□□□ -0.5
NCSTN-212ENST00000469159 GCP02774 474 aa11.9□□□□□ -0.5
NCSTN-212ENST00000469159 PELP1Q8IZL8 1130 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 671.3 ms