RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 RUNDC1Q96C34 613 aa18.31■□□□□ 0.52
SMARCD3-205ENST00000469154 RGS3P49796 1198 aa18.31■□□□□ 0.52
SMARCD3-205ENST00000469154 LMTK3Q96Q04 1460 aa18.3■□□□□ 0.52
SMARCD3-205ENST00000469154 NPHP4O75161 1426 aaPredicted RBP18.3■□□□□ 0.52
SMARCD3-205ENST00000469154 CANXP27824 592 aaKnown RBP18.29■□□□□ 0.52
SMARCD3-205ENST00000469154 PTPRUQ92729 1446 aa18.29■□□□□ 0.52
SMARCD3-205ENST00000469154 AMOTL2Q9Y2J4 779 aa18.29■□□□□ 0.52
SMARCD3-205ENST00000469154 AAMPQ13685 434 aa18.28■□□□□ 0.52
SMARCD3-205ENST00000469154 PUS7Q96PZ0 661 aaKnown RBP18.28■□□□□ 0.52
SMARCD3-205ENST00000469154 MINK1Q8N4C8 1332 aaPredicted RBP18.28■□□□□ 0.52
SMARCD3-205ENST00000469154 NSD2O96028 1365 aa18.28■□□□□ 0.52
SMARCD3-205ENST00000469154 DIP2AQ14689 1571 aa18.28■□□□□ 0.52
SMARCD3-205ENST00000469154 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
SMARCD3-205ENST00000469154 MAPK8IP3Q9UPT6 1336 aa18.27■□□□□ 0.52
SMARCD3-205ENST00000469154 CFAP53Q96M91 514 aa18.27■□□□□ 0.51
SMARCD3-205ENST00000469154 SLC12A5Q9H2X9 1139 aa18.27■□□□□ 0.51
SMARCD3-205ENST00000469154 DLC1Q96QB1 1528 aa18.26■□□□□ 0.51
SMARCD3-205ENST00000469154 ROBO2Q9HCK4 1378 aa18.26■□□□□ 0.51
SMARCD3-205ENST00000469154 TECPR2O15040 1411 aa18.26■□□□□ 0.51
SMARCD3-205ENST00000469154 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
SMARCD3-205ENST00000469154 WDR63Q8IWG1 891 aa18.26■□□□□ 0.51
SMARCD3-205ENST00000469154 PHF23Q9BUL5 403 aaPredicted RBP18.26■□□□□ 0.51
SMARCD3-205ENST00000469154 TULP4Q9NRJ4 1543 aa18.26■□□□□ 0.51
SMARCD3-205ENST00000469154 IGHDP01880 384 aa18.25■□□□□ 0.51
SMARCD3-205ENST00000469154 ADGRB2O60241 1585 aa18.25■□□□□ 0.51
SMARCD3-205ENST00000469154 CCDC27Q2M243 656 aa18.24■□□□□ 0.51
SMARCD3-205ENST00000469154 TCP11L2Q8N4U5 519 aa18.24■□□□□ 0.51
SMARCD3-205ENST00000469154 ANKRD36BQ8N2N9 1353 aa18.24■□□□□ 0.51
SMARCD3-205ENST00000469154 KCNA6P17658 529 aa18.23■□□□□ 0.51
SMARCD3-205ENST00000469154 EVC2Q86UK5 1308 aa18.23■□□□□ 0.51
SMARCD3-205ENST00000469154 SIRT1Q96EB6 747 aa18.23■□□□□ 0.51
SMARCD3-205ENST00000469154 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
SMARCD3-205ENST00000469154 PIK3R4Q99570 1358 aa18.23■□□□□ 0.51
SMARCD3-205ENST00000469154 PANK1Q8TE04 598 aa18.23■□□□□ 0.51
SMARCD3-205ENST00000469154 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
SMARCD3-205ENST00000469154 CPS1P31327 1500 aa18.23■□□□□ 0.51
SMARCD3-205ENST00000469154 RARSP54136 660 aaKnown RBP18.22■□□□□ 0.51
SMARCD3-205ENST00000469154 NFKBIBQ15653 356 aa18.22■□□□□ 0.51
SMARCD3-205ENST00000469154 KNDC1Q76NI1 1749 aa18.22■□□□□ 0.51
SMARCD3-205ENST00000469154 TNNT2P45379 298 aaPredicted RBP18.22■□□□□ 0.51
SMARCD3-205ENST00000469154 SLC4A3P48751 1232 aa18.22■□□□□ 0.51
SMARCD3-205ENST00000469154 PMFBP1Q8TBY8 1022 aa18.21■□□□□ 0.51
SMARCD3-205ENST00000469154 MTHFSP49914 203 aa18.21■□□□□ 0.51
SMARCD3-205ENST00000469154 CABP2Q9NPB3 220 aa18.21■□□□□ 0.51
SMARCD3-205ENST00000469154 ANKRD26Q9UPS8 1709 aa18.21■□□□□ 0.51
SMARCD3-205ENST00000469154 SRPK2P78362 688 aaKnown RBP18.2■□□□□ 0.5
SMARCD3-205ENST00000469154 RRP7AQ9Y3A4 280 aaKnown RBP18.2■□□□□ 0.5
SMARCD3-205ENST00000469154 NEUROD2Q15784 382 aa18.2■□□□□ 0.5
SMARCD3-205ENST00000469154 FRAT1Q92837 279 aaPredicted RBP18.19■□□□□ 0.5
SMARCD3-205ENST00000469154 CDK19Q9BWU1 502 aa18.18■□□□□ 0.5
SMARCD3-205ENST00000469154 MYH16Q9H6N6 1097 aa18.18■□□□□ 0.5
SMARCD3-205ENST00000469154 PTCH1Q13635 1447 aa18.18■□□□□ 0.5
SMARCD3-205ENST00000469154 XRN1Q8IZH2 1706 aaKnown RBP18.17■□□□□ 0.5
SMARCD3-205ENST00000469154 GSE1Q14687 1217 aa18.16■□□□□ 0.5
SMARCD3-205ENST00000469154 RBM33Q96EV2 1170 aaKnown RBP18.16■□□□□ 0.5
SMARCD3-205ENST00000469154 CHD2O14647 1828 aaKnown RBP18.16■□□□□ 0.5
SMARCD3-205ENST00000469154 WASLO00401 505 aaPredicted RBP18.15■□□□□ 0.5
SMARCD3-205ENST00000469154 USP19O94966 1318 aa18.15■□□□□ 0.5
SMARCD3-205ENST00000469154 STRCQ7RTU9 1775 aa18.15■□□□□ 0.5
SMARCD3-205ENST00000469154 CT47B1P0C2W7 299 aaPredicted RBP18.13■□□□□ 0.49
SMARCD3-205ENST00000469154 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.13■□□□□ 0.49
SMARCD3-205ENST00000469154 U2AF1L5P0DN76 240 aaPredicted RBP18.12■□□□□ 0.49
SMARCD3-205ENST00000469154 U2AF1Q01081 240 aaKnown RBP eCLIP18.12■□□□□ 0.49
SMARCD3-205ENST00000469154 RLBP1P12271 317 aa18.12■□□□□ 0.49
SMARCD3-205ENST00000469154 BECN1Q14457 450 aa18.11■□□□□ 0.49
SMARCD3-205ENST00000469154 RWDD1Q9H446 243 aaPredicted RBP18.11■□□□□ 0.49
SMARCD3-205ENST00000469154 COL3A1P02461 1466 aaPredicted RBP18.11■□□□□ 0.49
SMARCD3-205ENST00000469154 PCDHB15Q9Y5E8 787 aa18.11■□□□□ 0.49
SMARCD3-205ENST00000469154 NUTM2FA1L443 756 aa18.1■□□□□ 0.49
SMARCD3-205ENST00000469154 ATAD2Q6PL18 1390 aa18.1■□□□□ 0.49
SMARCD3-205ENST00000469154 A0A1W2PP64 1363 aa18.1■□□□□ 0.49
SMARCD3-205ENST00000469154 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
SMARCD3-205ENST00000469154 MVPQ14764 893 aaKnown RBP18.09■□□□□ 0.49
SMARCD3-205ENST00000469154 ZKSCAN2Q63HK3 967 aa18.09■□□□□ 0.49
SMARCD3-205ENST00000469154 PROSER2Q86WR7 435 aaPredicted RBP18.09■□□□□ 0.49
SMARCD3-205ENST00000469154 BCL2L13Q9BXK5 485 aa18.09■□□□□ 0.49
SMARCD3-205ENST00000469154 TNNQ9UQP3 1299 aa18.09■□□□□ 0.49
SMARCD3-205ENST00000469154 PDZRN3Q9UPQ7 1066 aa18.08■□□□□ 0.49
SMARCD3-205ENST00000469154 C14orf37Q86TY3 774 aa18.08■□□□□ 0.48
SMARCD3-205ENST00000469154 NUDT16Q96DE0 195 aaKnown RBP18.08■□□□□ 0.48
SMARCD3-205ENST00000469154 UPF2Q9HAU5 1272 aaKnown RBP18.08■□□□□ 0.48
SMARCD3-205ENST00000469154 CABP1Q9NZU7 370 aa18.08■□□□□ 0.48
SMARCD3-205ENST00000469154 NWD1Q149M9 1564 aa18.07■□□□□ 0.48
SMARCD3-205ENST00000469154 SEC24BO95487 1268 aa18.07■□□□□ 0.48
SMARCD3-205ENST00000469154 PRR36Q9H6K5 1346 aa18.06■□□□□ 0.48
SMARCD3-205ENST00000469154 FRAT2O75474 233 aaPredicted RBP18.06■□□□□ 0.48
SMARCD3-205ENST00000469154 DZIP1LQ8IYY4 767 aaKnown RBP18.06■□□□□ 0.48
SMARCD3-205ENST00000469154 IL27Q8NEV9 243 aa18.06■□□□□ 0.48
SMARCD3-205ENST00000469154 FTSJ3Q8IY81 847 aaKnown RBP18.05■□□□□ 0.48
SMARCD3-205ENST00000469154 IL16Q14005 1332 aa18.05■□□□□ 0.48
SMARCD3-205ENST00000469154 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
SMARCD3-205ENST00000469154 CCDC61Q9Y6R9 512 aa18.04■□□□□ 0.48
SMARCD3-205ENST00000469154 TERF2IPQ9NYB0 399 aa18.04■□□□□ 0.48
SMARCD3-205ENST00000469154 ZNF335Q9H4Z2 1342 aaPredicted RBP18.04■□□□□ 0.48
SMARCD3-205ENST00000469154 TMPOP42166 694 aaKnown RBP18.03■□□□□ 0.48
SMARCD3-205ENST00000469154 STRCP1A6NGW2 1772 aa18.03■□□□□ 0.48
SMARCD3-205ENST00000469154 CDC42BPGQ6DT37 1551 aa18.03■□□□□ 0.48
SMARCD3-205ENST00000469154 ATP7BP35670 1465 aa18.02■□□□□ 0.48
SMARCD3-205ENST00000469154 CD163L1Q9NR16 1453 aa18.02■□□□□ 0.48
SMARCD3-205ENST00000469154 TBC1D32Q96NH3 1257 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms