RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 CRYBG1Q9Y4K1 1723 aa21.43■■□□□ 1.02
SNED1-209ENST00000469006 BAG6P46379 1132 aa21.41■■□□□ 1.02
SNED1-209ENST00000469006 WASLO00401 505 aaPredicted RBP21.39■■□□□ 1.01
SNED1-209ENST00000469006 RGPD1P0DJD0 1748 aa21.38■■□□□ 1.01
SNED1-209ENST00000469006 THSD7AQ9UPZ6 1657 aa21.38■■□□□ 1.01
SNED1-209ENST00000469006 PSDA5PKW4 1024 aaPredicted RBP21.38■■□□□ 1.01
SNED1-209ENST00000469006 NGDNQ8NEJ9 315 aaKnown RBP21.38■■□□□ 1.01
SNED1-209ENST00000469006 KDM2AQ9Y2K7 1162 aa21.38■■□□□ 1.01
SNED1-209ENST00000469006 SPATA31A5Q5VU36 1347 aa21.37■■□□□ 1.01
SNED1-209ENST00000469006 SPATA31A7Q8IWB4 1347 aa21.37■■□□□ 1.01
SNED1-209ENST00000469006 ITSN1Q15811 1721 aa21.36■■□□□ 1.01
SNED1-209ENST00000469006 PAK3O75914 559 aaPredicted RBP21.36■■□□□ 1.01
SNED1-209ENST00000469006 DCAF11Q8TEB1 546 aa21.36■■□□□ 1.01
SNED1-209ENST00000469006 PRDM11Q9NQV5 511 aa21.36■■□□□ 1.01
SNED1-209ENST00000469006 ATP7BP35670 1465 aa21.36■■□□□ 1.01
SNED1-209ENST00000469006 ARHGEF28Q8N1W1 1705 aaKnown RBP21.35■■□□□ 1.01
SNED1-209ENST00000469006 FAM182BQ5T319 152 aa21.35■■□□□ 1.01
SNED1-209ENST00000469006 PHRF1Q9P1Y6 1649 aaKnown RBP21.33■■□□□ 1.01
SNED1-209ENST00000469006 TNS1Q9HBL0 1735 aaKnown RBP21.33■■□□□ 1.01
SNED1-209ENST00000469006 EN1Q05925 392 aaPredicted RBP21.33■■□□□ 1.01
SNED1-209ENST00000469006 HRCP23327 699 aa21.32■■□□□ 1
SNED1-209ENST00000469006 KIAA0232Q92628 1395 aa21.32■■□□□ 1
SNED1-209ENST00000469006 DISP2A7MBM2 1401 aa21.3■■□□□ 1
SNED1-209ENST00000469006 NUDT16Q96DE0 195 aaKnown RBP21.29■■□□□ 1
SNED1-209ENST00000469006 SPATA31A1Q5TZJ5 1347 aa21.29■■□□□ 1
SNED1-209ENST00000469006 CHRNA2Q15822 529 aa21.28■■□□□ 1
SNED1-209ENST00000469006 STAC3Q96MF2 364 aa21.28■■□□□ 1
SNED1-209ENST00000469006 TOPAZ1Q8N9V7 1692 aa21.28■■□□□ 1
SNED1-209ENST00000469006 R3HDM1Q15032 1099 aaKnown RBP21.26■□□□□ 0.99
SNED1-209ENST00000469006 STRN4Q9NRL3 753 aa21.26■□□□□ 0.99
SNED1-209ENST00000469006 NUTM2GQ5VZR2 741 aa21.25■□□□□ 0.99
SNED1-209ENST00000469006 POLR3AO14802 1390 aaPredicted RBP21.24■□□□□ 0.99
SNED1-209ENST00000469006 NRKQ7Z2Y5 1582 aa21.24■□□□□ 0.99
SNED1-209ENST00000469006 ZC3H6P61129 1189 aaKnown RBP21.24■□□□□ 0.99
SNED1-209ENST00000469006 CDK19Q9BWU1 502 aa21.24■□□□□ 0.99
SNED1-209ENST00000469006 EZH2Q15910 746 aaKnown RBP21.23■□□□□ 0.99
SNED1-209ENST00000469006 SSH2Q76I76 1423 aa21.22■□□□□ 0.99
SNED1-209ENST00000469006 TRIM37O94972 964 aa21.22■□□□□ 0.99
SNED1-209ENST00000469006 FAM196AQ6ZSG2 479 aa21.22■□□□□ 0.99
SNED1-209ENST00000469006 ACEP12821 1306 aa21.22■□□□□ 0.99
SNED1-209ENST00000469006 USP35Q9P2H5 1018 aa21.2■□□□□ 0.98
SNED1-209ENST00000469006 KIAA1210Q9ULL0 1709 aa21.19■□□□□ 0.98
SNED1-209ENST00000469006 NBPF8Q3BBV2 869 aa21.19■□□□□ 0.98
SNED1-209ENST00000469006 CAMKK2Q96RR4 588 aa21.19■□□□□ 0.98
SNED1-209ENST00000469006 CCDC61Q9Y6R9 512 aa21.19■□□□□ 0.98
SNED1-209ENST00000469006 LMO7Q8WWI1 1683 aa21.18■□□□□ 0.98
SNED1-209ENST00000469006 CAMTA1Q9Y6Y1 1673 aa21.18■□□□□ 0.98
SNED1-209ENST00000469006 EVA1CP58658 441 aa21.18■□□□□ 0.98
SNED1-209ENST00000469006 PARD3Q8TEW0 1356 aa21.18■□□□□ 0.98
SNED1-209ENST00000469006 PLEKHG3A1L390 1219 aa21.17■□□□□ 0.98
SNED1-209ENST00000469006 APBA3O96018 575 aa21.17■□□□□ 0.98
SNED1-209ENST00000469006 BARGINQ6ZT62 677 aa21.17■□□□□ 0.98
SNED1-209ENST00000469006 RREB1Q92766 1687 aa21.17■□□□□ 0.98
SNED1-209ENST00000469006 CPDO75976 1380 aa21.16■□□□□ 0.98
SNED1-209ENST00000469006 USP19O94966 1318 aa21.16■□□□□ 0.98
SNED1-209ENST00000469006 ABTB2Q8N961 1025 aa21.16■□□□□ 0.98
SNED1-209ENST00000469006 PDE3BQ13370 1112 aa21.15■□□□□ 0.98
SNED1-209ENST00000469006 LARP1Q6PKG0 1096 aaKnown RBP21.15■□□□□ 0.98
SNED1-209ENST00000469006 NUP188Q5SRE5 1749 aa21.15■□□□□ 0.98
SNED1-209ENST00000469006 TCP11L2Q8N4U5 519 aa21.13■□□□□ 0.97
SNED1-209ENST00000469006 PPIP5K1Q6PFW1 1433 aa21.12■□□□□ 0.97
SNED1-209ENST00000469006 NBPF1Q3BBV0 1214 aa21.11■□□□□ 0.97
SNED1-209ENST00000469006 COL5A2P05997 1499 aaPredicted RBP21.11■□□□□ 0.97
SNED1-209ENST00000469006 PARP4Q9UKK3 1724 aaKnown RBP21.1■□□□□ 0.97
SNED1-209ENST00000469006 SRPK2P78362 688 aaKnown RBP21.1■□□□□ 0.97
SNED1-209ENST00000469006 NLRP13Q86W25 1043 aa21.09■□□□□ 0.97
SNED1-209ENST00000469006 CENPJQ9HC77 1338 aaPredicted RBP21.08■□□□□ 0.97
SNED1-209ENST00000469006 GCP02774 474 aa21.08■□□□□ 0.97
SNED1-209ENST00000469006 THRAP3Q9Y2W1 955 aaKnown RBP21.08■□□□□ 0.97
SNED1-209ENST00000469006 QRICH2Q9H0J4 1663 aa21.08■□□□□ 0.96
SNED1-209ENST00000469006 CABP2Q9NPB3 220 aa21.07■□□□□ 0.96
SNED1-209ENST00000469006 CRB1P82279 1406 aa21.06■□□□□ 0.96
SNED1-209ENST00000469006 BRD4O60885 1362 aaPredicted RBP21.06■□□□□ 0.96
SNED1-209ENST00000469006 SLIT3O75094 1523 aa21.05■□□□□ 0.96
SNED1-209ENST00000469006 ZBTB7CA1YPR0 619 aa21.05■□□□□ 0.96
SNED1-209ENST00000469006 NBPF14Q5TI25 921 aa21.05■□□□□ 0.96
SNED1-209ENST00000469006 USP6P35125 1406 aa21.04■□□□□ 0.96
SNED1-209ENST00000469006 PEAK1Q9H792 1746 aa21.04■□□□□ 0.96
SNED1-209ENST00000469006 LRRC37A3O60309 1634 aa21.04■□□□□ 0.96
SNED1-209ENST00000469006 OVOS2A0A0G2JMS6 1433 aa21.04■□□□□ 0.96
SNED1-209ENST00000469006 OVOS2A0A0J9YW53 1432 aa21.04■□□□□ 0.96
SNED1-209ENST00000469006 OVOS2Q6IE36 1432 aa21.04■□□□□ 0.96
SNED1-209ENST00000469006 AATKQ6ZMQ8 1374 aa21.01■□□□□ 0.95
SNED1-209ENST00000469006 NLRP6P59044 892 aa21.01■□□□□ 0.95
SNED1-209ENST00000469006 PIK3C2AO00443 1686 aa21.01■□□□□ 0.95
SNED1-209ENST00000469006 C11orf95C9JLR9 678 aaPredicted RBP21■□□□□ 0.95
SNED1-209ENST00000469006 CABP1Q9NZU7 370 aa21■□□□□ 0.95
SNED1-209ENST00000469006 RGPD3A6NKT7 1758 aaPredicted RBP21■□□□□ 0.95
SNED1-209ENST00000469006 RGPD4Q7Z3J3 1758 aa21■□□□□ 0.95
SNED1-209ENST00000469006 WNK3Q9BYP7 1800 aa20.99■□□□□ 0.95
SNED1-209ENST00000469006 COL18A1P39060 1754 aa20.98■□□□□ 0.95
SNED1-209ENST00000469006 SBF2Q86WG5 1849 aa20.97■□□□□ 0.95
SNED1-209ENST00000469006 DDB1Q16531 1140 aa20.97■□□□□ 0.95
SNED1-209ENST00000469006 TOM1L2Q6ZVM7 507 aa20.97■□□□□ 0.95
SNED1-209ENST00000469006 SPON1Q9HCB6 807 aa20.97■□□□□ 0.95
SNED1-209ENST00000469006 CPSF1Q10570 1443 aaKnown RBP20.96■□□□□ 0.95
SNED1-209ENST00000469006 PPP1R1BQ9UD71 204 aaPredicted RBP20.96■□□□□ 0.95
SNED1-209ENST00000469006 TRPM1Q7Z4N2 1603 aa20.94■□□□□ 0.94
SNED1-209ENST00000469006 KCNQ2O43526 872 aa20.94■□□□□ 0.94
SNED1-209ENST00000469006 WDR17Q8IZU2 1322 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms