RNA–Protein interactions for RNA: ENST00000468359.1

CDCA7-207, Transcript of cell division cycle associated 7, humanhuman

TSL 3

Gene CDCA7, Length 906 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-207ENST00000468359 ZFYVE9O95405 1425 aa12.46□□□□□ -0.41
CDCA7-207ENST00000468359 FAM135BQ49AJ0 1406 aa12.46□□□□□ -0.41
CDCA7-207ENST00000468359 NUDT7P0C024 238 aa12.46□□□□□ -0.41
CDCA7-207ENST00000468359 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
CDCA7-207ENST00000468359 NWD1Q149M9 1564 aa12.46□□□□□ -0.42
CDCA7-207ENST00000468359 TMEM131LA2VDJ0 1609 aa12.45□□□□□ -0.42
CDCA7-207ENST00000468359 PTGER2P43116 358 aa12.45□□□□□ -0.42
CDCA7-207ENST00000468359 FOXK1P85037 733 aa12.45□□□□□ -0.42
CDCA7-207ENST00000468359 SLC26A8Q96RN1 970 aa12.45□□□□□ -0.42
CDCA7-207ENST00000468359 NKTRP30414 1462 aaKnown RBP12.45□□□□□ -0.42
CDCA7-207ENST00000468359 TMEM94Q12767 1356 aa12.44□□□□□ -0.42
CDCA7-207ENST00000468359 PLEKHG1Q9ULL1 1385 aa12.43□□□□□ -0.42
CDCA7-207ENST00000468359 PSDA5PKW4 1024 aaPredicted RBP12.43□□□□□ -0.42
CDCA7-207ENST00000468359 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
CDCA7-207ENST00000468359 IQGAP3Q86VI3 1631 aa12.43□□□□□ -0.42
CDCA7-207ENST00000468359 E9PCH4 1651 aa12.42□□□□□ -0.42
CDCA7-207ENST00000468359 MYO5BQ9ULV0 1848 aa12.42□□□□□ -0.42
CDCA7-207ENST00000468359 PBX2P40425 430 aa12.42□□□□□ -0.42
CDCA7-207ENST00000468359 NKX1-1Q15270 411 aaPredicted RBP12.42□□□□□ -0.42
CDCA7-207ENST00000468359 RIMS2Q9UQ26 1411 aa12.42□□□□□ -0.42
CDCA7-207ENST00000468359 PROSER2Q86WR7 435 aaPredicted RBP12.41□□□□□ -0.42
CDCA7-207ENST00000468359 PLPP6Q8IY26 295 aa12.41□□□□□ -0.42
CDCA7-207ENST00000468359 TBX22Q9Y458 520 aa12.41□□□□□ -0.42
CDCA7-207ENST00000468359 CHD2O14647 1828 aaKnown RBP12.41□□□□□ -0.42
CDCA7-207ENST00000468359 NCOA3Q9Y6Q9 1424 aa12.4□□□□□ -0.42
CDCA7-207ENST00000468359 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDCA7-207ENST00000468359 PTCD2Q8WV60 388 aaKnown RBP12.4□□□□□ -0.42
CDCA7-207ENST00000468359 LHX6Q9UPM6 363 aa12.4□□□□□ -0.42
CDCA7-207ENST00000468359 TBC1D12O60347 775 aa12.39□□□□□ -0.43
CDCA7-207ENST00000468359 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
CDCA7-207ENST00000468359 NUP155O75694 1391 aa12.38□□□□□ -0.43
CDCA7-207ENST00000468359 PIK3R4Q99570 1358 aa12.38□□□□□ -0.43
CDCA7-207ENST00000468359 ROBO1Q9Y6N7 1651 aa12.38□□□□□ -0.43
CDCA7-207ENST00000468359 ADAMTS13Q76LX8 1427 aa12.37□□□□□ -0.43
CDCA7-207ENST00000468359 MSH6P52701 1360 aa12.37□□□□□ -0.43
CDCA7-207ENST00000468359 DIP2AQ14689 1571 aa12.37□□□□□ -0.43
CDCA7-207ENST00000468359 PPP1R15AO75807 674 aaPredicted RBP12.36□□□□□ -0.43
CDCA7-207ENST00000468359 DSG2Q14126 1118 aa12.36□□□□□ -0.43
CDCA7-207ENST00000468359 RBM33Q96EV2 1170 aaKnown RBP12.36□□□□□ -0.43
CDCA7-207ENST00000468359 BCANQ96GW7 911 aa12.36□□□□□ -0.43
CDCA7-207ENST00000468359 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.436e-6■■□□□ 12.1
CDCA7-207ENST00000468359 ANKRD13DQ6ZTN6 518 aa12.35□□□□□ -0.43
CDCA7-207ENST00000468359 SLAIN2Q9P270 581 aa12.35□□□□□ -0.43
CDCA7-207ENST00000468359 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
CDCA7-207ENST00000468359 SPHKAPQ2M3C7 1700 aa12.31□□□□□ -0.44
CDCA7-207ENST00000468359 ITGAEP38570 1179 aa12.31□□□□□ -0.44
CDCA7-207ENST00000468359 CRISPLD2Q9H0B8 497 aa12.31□□□□□ -0.44
CDCA7-207ENST00000468359 C19orf44Q9H6X5 657 aa12.31□□□□□ -0.44
CDCA7-207ENST00000468359 TRPM2O94759 1503 aa12.31□□□□□ -0.44
CDCA7-207ENST00000468359 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
CDCA7-207ENST00000468359 NRXN3Q9Y4C0 1643 aa12.3□□□□□ -0.44
CDCA7-207ENST00000468359 PDE4AP27815 886 aa12.3□□□□□ -0.44
CDCA7-207ENST00000468359 NUTM2DQ5VT03 806 aaPredicted RBP12.3□□□□□ -0.44
CDCA7-207ENST00000468359 NAIPQ13075 1403 aa12.29□□□□□ -0.44
CDCA7-207ENST00000468359 PTPRUQ92729 1446 aa12.29□□□□□ -0.44
CDCA7-207ENST00000468359 PHLPP1O60346 1717 aa12.29□□□□□ -0.44
CDCA7-207ENST00000468359 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.29□□□□□ -0.44
CDCA7-207ENST00000468359 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
CDCA7-207ENST00000468359 AMOTL2Q9Y2J4 779 aa12.29□□□□□ -0.44
CDCA7-207ENST00000468359 JCADQ9P266 1359 aa12.29□□□□□ -0.44
CDCA7-207ENST00000468359 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
CDCA7-207ENST00000468359 COL16A1Q07092 1604 aaPredicted RBP12.28□□□□□ -0.44
CDCA7-207ENST00000468359 PPP4R3BQ5MIZ7 849 aa12.27□□□□□ -0.45
CDCA7-207ENST00000468359 PPP1R15BQ5SWA1 713 aa12.27□□□□□ -0.45
CDCA7-207ENST00000468359 XRN1Q8IZH2 1706 aaKnown RBP12.27□□□□□ -0.45
CDCA7-207ENST00000468359 DCCP43146 1447 aa12.27□□□□□ -0.45
CDCA7-207ENST00000468359 AHDC1Q5TGY3 1603 aaPredicted RBP12.26□□□□□ -0.45
CDCA7-207ENST00000468359 ARHGAP33O14559 1287 aa12.26□□□□□ -0.45
CDCA7-207ENST00000468359 NEXMIFQ5QGS0 1516 aa12.26□□□□□ -0.45
CDCA7-207ENST00000468359 CLTCL1P53675 1640 aa12.26□□□□□ -0.45
CDCA7-207ENST00000468359 ATF3P18847 181 aa12.25□□□□□ -0.45
CDCA7-207ENST00000468359 POTEAQ6S8J7 498 aa12.25□□□□□ -0.45
CDCA7-207ENST00000468359 OXER1Q8TDS5 423 aa12.25□□□□□ -0.45
CDCA7-207ENST00000468359 HFM1A2PYH4 1435 aa12.25□□□□□ -0.45
CDCA7-207ENST00000468359 METP08581 1390 aa12.24□□□□□ -0.45
CDCA7-207ENST00000468359 SPATA31A6Q5VVP1 1343 aa12.24□□□□□ -0.45
CDCA7-207ENST00000468359 C14orf37Q86TY3 774 aa12.24□□□□□ -0.45
CDCA7-207ENST00000468359 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
CDCA7-207ENST00000468359 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
CDCA7-207ENST00000468359 ZNF326Q5BKZ1 582 aaKnown RBP12.23□□□□□ -0.45
CDCA7-207ENST00000468359 KIF1BO60333 1816 aa12.23□□□□□ -0.45
CDCA7-207ENST00000468359 POTEEQ6S8J3 1075 aa12.22□□□□□ -0.45
CDCA7-207ENST00000468359 BRINP3Q76B58 766 aa12.22□□□□□ -0.45
CDCA7-207ENST00000468359 SHPRHQ149N8 1683 aa12.22□□□□□ -0.45
CDCA7-207ENST00000468359 MST1RQ04912 1400 aa12.21□□□□□ -0.45
CDCA7-207ENST00000468359 UPF1Q92900 1129 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDCA7-207ENST00000468359 PRAG1Q86YV5 1406 aa12.2□□□□□ -0.46
CDCA7-207ENST00000468359 LRP6O75581 1613 aa12.2□□□□□ -0.46
CDCA7-207ENST00000468359 SETD5Q9C0A6 1442 aa12.2□□□□□ -0.46
CDCA7-207ENST00000468359 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
CDCA7-207ENST00000468359 RPGRIP1LQ68CZ1 1315 aa12.19□□□□□ -0.46
CDCA7-207ENST00000468359 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
CDCA7-207ENST00000468359 ASXL1Q8IXJ9 1541 aa12.19□□□□□ -0.46
CDCA7-207ENST00000468359 SETD1AO15047 1707 aaKnown RBP12.19□□□□□ -0.46
CDCA7-207ENST00000468359 NHSL1Q5SYE7 1610 aa12.19□□□□□ -0.46
CDCA7-207ENST00000468359 TK2O00142 265 aa12.18□□□□□ -0.46
CDCA7-207ENST00000468359 ADGRD1Q6QNK2 874 aa12.18□□□□□ -0.46
CDCA7-207ENST00000468359 PTCH1Q13635 1447 aa12.18□□□□□ -0.46
CDCA7-207ENST00000468359 LARP6Q9BRS8 491 aaKnown RBP12.17□□□□□ -0.46
CDCA7-207ENST00000468359 NALCNQ8IZF0 1738 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms