RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
ATG3-203ENST00000465980 ROBO1Q9Y6N7 1651 aa14.05□□□□□ -0.16
ATG3-203ENST00000465980 HDGFP51858 240 aaKnown RBP14.05□□□□□ -0.16
ATG3-203ENST00000465980 NLRP6P59044 892 aa14.05□□□□□ -0.16
ATG3-203ENST00000465980 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.04□□□□□ -0.16
ATG3-203ENST00000465980 DIP2AQ14689 1571 aa14.04□□□□□ -0.16
ATG3-203ENST00000465980 TRIM52Q96A61 297 aa14.03□□□□□ -0.16
ATG3-203ENST00000465980 BCL11BQ9C0K0 894 aaPredicted RBP14.03□□□□□ -0.16
ATG3-203ENST00000465980 ADAMTS13Q76LX8 1427 aa14.03□□□□□ -0.16
ATG3-203ENST00000465980 TRPM2O94759 1503 aa14.03□□□□□ -0.16
ATG3-203ENST00000465980 NRXN3Q9Y4C0 1643 aa14.02□□□□□ -0.16
ATG3-203ENST00000465980 HFM1A2PYH4 1435 aa14.02□□□□□ -0.16
ATG3-203ENST00000465980 ZNF326Q5BKZ1 582 aaKnown RBP14.02□□□□□ -0.17
ATG3-203ENST00000465980 MSH6P52701 1360 aa14.01□□□□□ -0.17
ATG3-203ENST00000465980 ERBB3P21860 1342 aa14□□□□□ -0.17
ATG3-203ENST00000465980 FBXO22Q8NEZ5 403 aa14□□□□□ -0.17
ATG3-203ENST00000465980 TBX22Q9Y458 520 aa14□□□□□ -0.17
ATG3-203ENST00000465980 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.99□□□□□ -0.17
ATG3-203ENST00000465980 C14orf37Q86TY3 774 aa13.99□□□□□ -0.17
ATG3-203ENST00000465980 STK24Q9Y6E0 443 aa13.99□□□□□ -0.17
ATG3-203ENST00000465980 PHLPP1O60346 1717 aa13.98□□□□□ -0.17
ATG3-203ENST00000465980 SETBP1Q9Y6X0 1596 aa13.98□□□□□ -0.17
ATG3-203ENST00000465980 NEXMIFQ5QGS0 1516 aa13.98□□□□□ -0.17
ATG3-203ENST00000465980 FAM135BQ49AJ0 1406 aa13.98□□□□□ -0.17
ATG3-203ENST00000465980 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
ATG3-203ENST00000465980 XRN1Q8IZH2 1706 aaKnown RBP13.97□□□□□ -0.17
ATG3-203ENST00000465980 PTPRUQ92729 1446 aa13.97□□□□□ -0.17
ATG3-203ENST00000465980 SOCS7O14512 581 aa13.96□□□□□ -0.17
ATG3-203ENST00000465980 PPLO60437 1756 aa13.95□□□□□ -0.18
ATG3-203ENST00000465980 PIK3R4Q99570 1358 aa13.95□□□□□ -0.18
ATG3-203ENST00000465980 AMOTL2Q9Y2J4 779 aa13.94□□□□□ -0.18
ATG3-203ENST00000465980 STK25O00506 426 aa13.93□□□□□ -0.18
ATG3-203ENST00000465980 GPR153Q6NV75 609 aa13.93□□□□□ -0.18
ATG3-203ENST00000465980 MFRPQ9BY79 579 aa13.93□□□□□ -0.18
ATG3-203ENST00000465980 SLAIN2Q9P270 581 aa13.93□□□□□ -0.18
ATG3-203ENST00000465980 SETD1AO15047 1707 aaKnown RBP13.93□□□□□ -0.18
ATG3-203ENST00000465980 METP08581 1390 aa13.92□□□□□ -0.18
ATG3-203ENST00000465980 NALCNQ8IZF0 1738 aa13.92□□□□□ -0.18
ATG3-203ENST00000465980 NCOA3Q9Y6Q9 1424 aa13.9□□□□□ -0.18
ATG3-203ENST00000465980 VARS2Q5ST30 1063 aaKnown RBP13.9□□□□□ -0.18
ATG3-203ENST00000465980 COL16A1Q07092 1604 aaPredicted RBP13.9□□□□□ -0.19
ATG3-203ENST00000465980 ATF3P18847 181 aa13.89□□□□□ -0.19
ATG3-203ENST00000465980 IFT172Q9UG01 1749 aa13.88□□□□□ -0.19
ATG3-203ENST00000465980 C19orf44Q9H6X5 657 aa13.88□□□□□ -0.19
ATG3-203ENST00000465980 CADPS2Q86UW7 1296 aa13.87□□□□□ -0.19
ATG3-203ENST00000465980 ZNF687Q8N1G0 1237 aa13.86□□□□□ -0.19
ATG3-203ENST00000465980 CCDC144AA2RUR9 1427 aa13.86□□□□□ -0.19
ATG3-203ENST00000465980 AHDC1Q5TGY3 1603 aaPredicted RBP13.86□□□□□ -0.19
ATG3-203ENST00000465980 MPHOSPH9Q99550 1183 aa13.85□□□□□ -0.19
ATG3-203ENST00000465980 DCCP43146 1447 aa13.84□□□□□ -0.19
ATG3-203ENST00000465980 SHPRHQ149N8 1683 aa13.84□□□□□ -0.19
ATG3-203ENST00000465980 JCADQ9P266 1359 aa13.83□□□□□ -0.19
ATG3-203ENST00000465980 NHSL1Q5SYE7 1610 aa13.83□□□□□ -0.2
ATG3-203ENST00000465980 ADGRL3Q9HAR2 1447 aa13.83□□□□□ -0.2
ATG3-203ENST00000465980 KIF3CO14782 793 aa13.83□□□□□ -0.2
ATG3-203ENST00000465980 RGL2O15211 777 aa13.83□□□□□ -0.2
ATG3-203ENST00000465980 RGL3Q3MIN7 710 aa13.83□□□□□ -0.2
ATG3-203ENST00000465980 ASXL1Q8IXJ9 1541 aa13.83□□□□□ -0.2
ATG3-203ENST00000465980 MST1RQ04912 1400 aa13.82□□□□□ -0.2
ATG3-203ENST00000465980 SETD5Q9C0A6 1442 aa13.82□□□□□ -0.2
ATG3-203ENST00000465980 BRINP3Q76B58 766 aa13.82□□□□□ -0.2
ATG3-203ENST00000465980 RGS17Q9UGC6 210 aaPredicted RBP13.82□□□□□ -0.2
ATG3-203ENST00000465980 RPGRIP1LQ68CZ1 1315 aa13.82□□□□□ -0.2
ATG3-203ENST00000465980 ROBO2Q9HCK4 1378 aa13.81□□□□□ -0.2
ATG3-203ENST00000465980 PTCH1Q13635 1447 aa13.81□□□□□ -0.2
ATG3-203ENST00000465980 SPATA31E1Q6ZUB1 1445 aa13.81□□□□□ -0.2
ATG3-203ENST00000465980 ARSIQ5FYB1 569 aa13.8□□□□□ -0.2
ATG3-203ENST00000465980 ADGRF5Q8IZF2 1346 aa13.8□□□□□ -0.2
ATG3-203ENST00000465980 RAB3GAP2Q9H2M9 1393 aa13.8□□□□□ -0.2
ATG3-203ENST00000465980 LRP6O75581 1613 aa13.79□□□□□ -0.2
ATG3-203ENST00000465980 HRCP23327 699 aa13.79□□□□□ -0.2
ATG3-203ENST00000465980 DDX17Q92841 729 aaKnown RBP13.78□□□□□ -0.2
ATG3-203ENST00000465980 C2orf72A6NCS6 295 aa13.77□□□□□ -0.21
ATG3-203ENST00000465980 POTEAQ6S8J7 498 aa13.77□□□□□ -0.21
ATG3-203ENST00000465980 KNDC1Q76NI1 1749 aa13.76□□□□□ -0.21
ATG3-203ENST00000465980 ANKRD30BQ9BXX2 1392 aa13.76□□□□□ -0.21
ATG3-203ENST00000465980 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
ATG3-203ENST00000465980 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
ATG3-203ENST00000465980 STK26Q9P289 416 aa13.76□□□□□ -0.21
ATG3-203ENST00000465980 C1orf167Q5SNV9 1468 aa13.75□□□□□ -0.21
ATG3-203ENST00000465980 NUTM2BA6NNL0 878 aaPredicted RBP13.75□□□□□ -0.21
ATG3-203ENST00000465980 NUTM2EB1AL46 878 aaPredicted RBP13.75□□□□□ -0.21
ATG3-203ENST00000465980 NUTM2AQ8IVF1 878 aaPredicted RBP13.75□□□□□ -0.21
ATG3-203ENST00000465980 PRAG1Q86YV5 1406 aa13.74□□□□□ -0.21
ATG3-203ENST00000465980 SPATA31A6Q5VVP1 1343 aa13.74□□□□□ -0.21
ATG3-203ENST00000465980 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
ATG3-203ENST00000465980 SLC34A2O95436 690 aa13.73□□□□□ -0.21
ATG3-203ENST00000465980 PTGER2P43116 358 aa13.73□□□□□ -0.21
ATG3-203ENST00000465980 TMEM132EQ6IEE7 984 aa13.73□□□□□ -0.21
ATG3-203ENST00000465980 CDC42BPGQ6DT37 1551 aa13.73□□□□□ -0.21
ATG3-203ENST00000465980 LAMC1P11047 1609 aa13.72□□□□□ -0.21
ATG3-203ENST00000465980 RNF166Q96A37 237 aaPredicted RBP13.72□□□□□ -0.21
ATG3-203ENST00000465980 RGPD8O14715 1765 aaPredicted RBP13.72□□□□□ -0.21
ATG3-203ENST00000465980 WAPLQ7Z5K2 1190 aa13.71□□□□□ -0.21
ATG3-203ENST00000465980 KHSRPQ92945 711 aaKnown RBP eCLIP13.71□□□□□ -0.21
ATG3-203ENST00000465980 ORAI2Q96SN7 254 aa13.71□□□□□ -0.21
ATG3-203ENST00000465980 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.22
ATG3-203ENST00000465980 FMN2Q9NZ56 1722 aa13.7□□□□□ -0.22
ATG3-203ENST00000465980 ACIN1Q9UKV3 1341 aaKnown RBP13.7□□□□□ -0.22
ATG3-203ENST00000465980 CCER1Q8TC90 406 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms