RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 TRAK1Q9UPV9 953 aa12.56□□□□□ -0.4
DDR1-242ENST00000465966 PLCH1Q4KWH8 1693 aa12.56□□□□□ -0.4
DDR1-242ENST00000465966 APBA3O96018 575 aa12.55□□□□□ -0.4
DDR1-242ENST00000465966 MINK1Q8N4C8 1332 aaPredicted RBP12.55□□□□□ -0.4
DDR1-242ENST00000465966 WASLO00401 505 aaPredicted RBP12.54□□□□□ -0.4
DDR1-242ENST00000465966 TRIM37O94972 964 aa12.54□□□□□ -0.4
DDR1-242ENST00000465966 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
DDR1-242ENST00000465966 NBPF14Q5TI25 921 aa12.54□□□□□ -0.4
DDR1-242ENST00000465966 CAMKK2Q96RR4 588 aa12.54□□□□□ -0.4
DDR1-242ENST00000465966 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
DDR1-242ENST00000465966 PARD3Q8TEW0 1356 aa12.54□□□□□ -0.4
DDR1-242ENST00000465966 RAB3GAP2Q9H2M9 1393 aa12.54□□□□□ -0.4
DDR1-242ENST00000465966 DLC1Q96QB1 1528 aa12.53□□□□□ -0.4
DDR1-242ENST00000465966 EVA1CP58658 441 aa12.53□□□□□ -0.4
DDR1-242ENST00000465966 PDE3BQ13370 1112 aa12.53□□□□□ -0.4
DDR1-242ENST00000465966 SPATA31A1Q5TZJ5 1347 aa12.53□□□□□ -0.4
DDR1-242ENST00000465966 IFT172Q9UG01 1749 aa12.52□□□□□ -0.41
DDR1-242ENST00000465966 COL14A1Q05707 1796 aaKnown RBP12.52□□□□□ -0.41
DDR1-242ENST00000465966 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
DDR1-242ENST00000465966 YY1P25490 414 aa12.51□□□□□ -0.41
DDR1-242ENST00000465966 CHRNA2Q15822 529 aa12.51□□□□□ -0.41
DDR1-242ENST00000465966 USP35Q9P2H5 1018 aa12.51□□□□□ -0.41
DDR1-242ENST00000465966 PRR36Q9H6K5 1346 aa12.51□□□□□ -0.41
DDR1-242ENST00000465966 KIAA0232Q92628 1395 aa12.51□□□□□ -0.41
DDR1-242ENST00000465966 ZC3H6P61129 1189 aaKnown RBP12.5□□□□□ -0.41
DDR1-242ENST00000465966 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
DDR1-242ENST00000465966 PPP1R1BQ9UD71 204 aaPredicted RBP12.5□□□□□ -0.41
DDR1-242ENST00000465966 KDM2AQ9Y2K7 1162 aa12.5□□□□□ -0.41
DDR1-242ENST00000465966 RGPD1P0DJD0 1748 aa12.49□□□□□ -0.41
DDR1-242ENST00000465966 NRAPQ86VF7 1730 aa12.49□□□□□ -0.41
DDR1-242ENST00000465966 ABCA3Q99758 1704 aa12.49□□□□□ -0.41
DDR1-242ENST00000465966 ADGRB2O60241 1585 aa12.49□□□□□ -0.41
DDR1-242ENST00000465966 TULP4Q9NRJ4 1543 aa12.49□□□□□ -0.41
DDR1-242ENST00000465966 STAC3Q96MF2 364 aa12.49□□□□□ -0.41
DDR1-242ENST00000465966 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
DDR1-242ENST00000465966 DCAF11Q8TEB1 546 aa12.48□□□□□ -0.41
DDR1-242ENST00000465966 NUDT16Q96DE0 195 aaKnown RBP12.48□□□□□ -0.41
DDR1-242ENST00000465966 NUTM2GQ5VZR2 741 aa12.47□□□□□ -0.41
DDR1-242ENST00000465966 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
DDR1-242ENST00000465966 SPON1Q9HCB6 807 aa12.47□□□□□ -0.41
DDR1-242ENST00000465966 RGPD8O14715 1765 aaPredicted RBP12.47□□□□□ -0.41
DDR1-242ENST00000465966 TRPM3Q9HCF6 1732 aaPredicted RBP12.46□□□□□ -0.41
DDR1-242ENST00000465966 THSD7AQ9UPZ6 1657 aa12.46□□□□□ -0.41
DDR1-242ENST00000465966 CCER1Q8TC90 406 aaPredicted RBP12.46□□□□□ -0.41
DDR1-242ENST00000465966 THRAP3Q9Y2W1 955 aaKnown RBP12.46□□□□□ -0.41
DDR1-242ENST00000465966 ALS2Q96Q42 1657 aa12.45□□□□□ -0.42
DDR1-242ENST00000465966 ADGRB1O14514 1584 aa12.45□□□□□ -0.42
DDR1-242ENST00000465966 KCNQ2O43526 872 aa12.45□□□□□ -0.42
DDR1-242ENST00000465966 ABTB2Q8N961 1025 aa12.45□□□□□ -0.42
DDR1-242ENST00000465966 ATP7BP35670 1465 aa12.45□□□□□ -0.42
DDR1-242ENST00000465966 LARP1Q6PKG0 1096 aaKnown RBP12.44□□□□□ -0.42
DDR1-242ENST00000465966 CDK19Q9BWU1 502 aa12.44□□□□□ -0.42
DDR1-242ENST00000465966 CCDC61Q9Y6R9 512 aa12.44□□□□□ -0.42
DDR1-242ENST00000465966 SSH2Q76I76 1423 aa12.44□□□□□ -0.42
DDR1-242ENST00000465966 ACEP12821 1306 aa12.42□□□□□ -0.42
DDR1-242ENST00000465966 NLRP13Q86W25 1043 aa12.42□□□□□ -0.42
DDR1-242ENST00000465966 POLR3AO14802 1390 aaPredicted RBP12.42□□□□□ -0.42
DDR1-242ENST00000465966 CPDO75976 1380 aa12.42□□□□□ -0.42
DDR1-242ENST00000465966 NINLQ9Y2I6 1382 aa12.42□□□□□ -0.42
DDR1-242ENST00000465966 PLEKHG3A1L390 1219 aa12.41□□□□□ -0.42
DDR1-242ENST00000465966 TNS1Q9HBL0 1735 aaKnown RBP12.41□□□□□ -0.42
DDR1-242ENST00000465966 GCP02774 474 aa12.4□□□□□ -0.42
DDR1-242ENST00000465966 PLSCR1O15162 318 aa12.39□□□□□ -0.43
DDR1-242ENST00000465966 USP19O94966 1318 aa12.37□□□□□ -0.43
DDR1-242ENST00000465966 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
DDR1-242ENST00000465966 OVOS2A0A0J9YW53 1432 aa12.37□□□□□ -0.43
DDR1-242ENST00000465966 OVOS2Q6IE36 1432 aa12.37□□□□□ -0.43
DDR1-242ENST00000465966 ZBTB7CA1YPR0 619 aa12.37□□□□□ -0.43
DDR1-242ENST00000465966 SRPK2P78362 688 aaKnown RBP12.37□□□□□ -0.43
DDR1-242ENST00000465966 DDB1Q16531 1140 aa12.37□□□□□ -0.43
DDR1-242ENST00000465966 BCL11BQ9C0K0 894 aaPredicted RBP12.37□□□□□ -0.43
DDR1-242ENST00000465966 CAMTA1Q9Y6Y1 1673 aa12.37□□□□□ -0.43
DDR1-242ENST00000465966 CRYBG1Q9Y4K1 1723 aa12.37□□□□□ -0.43
DDR1-242ENST00000465966 TOM1L2Q6ZVM7 507 aa12.36□□□□□ -0.43
DDR1-242ENST00000465966 CRB1P82279 1406 aa12.36□□□□□ -0.43
DDR1-242ENST00000465966 BRD4O60885 1362 aaPredicted RBP12.35□□□□□ -0.43
DDR1-242ENST00000465966 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
DDR1-242ENST00000465966 NLRP6P59044 892 aa12.35□□□□□ -0.43
DDR1-242ENST00000465966 COL5A2P05997 1499 aaPredicted RBP12.34□□□□□ -0.43
DDR1-242ENST00000465966 PHRF1Q9P1Y6 1649 aaKnown RBP12.34□□□□□ -0.43
DDR1-242ENST00000465966 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
DDR1-242ENST00000465966 CLSPNQ9HAW4 1339 aa12.34□□□□□ -0.43
DDR1-242ENST00000465966 ITSN1Q15811 1721 aa12.34□□□□□ -0.43
DDR1-242ENST00000465966 AATKQ6ZMQ8 1374 aa12.33□□□□□ -0.44
DDR1-242ENST00000465966 RREB1Q92766 1687 aa12.33□□□□□ -0.44
DDR1-242ENST00000465966 STK32BQ9NY57 414 aa12.33□□□□□ -0.44
DDR1-242ENST00000465966 PPIP5K1Q6PFW1 1433 aa12.33□□□□□ -0.44
DDR1-242ENST00000465966 NUP188Q5SRE5 1749 aa12.32□□□□□ -0.44
DDR1-242ENST00000465966 NRKQ7Z2Y5 1582 aa12.32□□□□□ -0.44
DDR1-242ENST00000465966 ZBTB7AO95365 584 aa12.32□□□□□ -0.44
DDR1-242ENST00000465966 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
DDR1-242ENST00000465966 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
DDR1-242ENST00000465966 CABP1Q9NZU7 370 aa12.31□□□□□ -0.44
DDR1-242ENST00000465966 CENPJQ9HC77 1338 aaPredicted RBP12.31□□□□□ -0.44
DDR1-242ENST00000465966 CSB-PGBD3P0DP91 1061 aa12.3□□□□□ -0.44
DDR1-242ENST00000465966 ZNF784Q8NCA9 323 aaPredicted RBP12.3□□□□□ -0.44
DDR1-242ENST00000465966 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
DDR1-242ENST00000465966 WDR17Q8IZU2 1322 aa12.3□□□□□ -0.44
DDR1-242ENST00000465966 LMO7Q8WWI1 1683 aa12.29□□□□□ -0.44
DDR1-242ENST00000465966 EXOC5O00471 708 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms