RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 LRRN4Q8WUT4 740 aa7.48□□□□□ -1.21
XRN1-205ENST00000465507 CCNYL3P0C7X3 344 aa7.47□□□□□ -1.21
XRN1-205ENST00000465507 LINC01559Q495D7 138 aa7.47□□□□□ -1.21
XRN1-205ENST00000465507 MAP10Q9P2G4 905 aa7.47□□□□□ -1.21
XRN1-205ENST00000465507 TUSC1Q2TAM9 212 aa7.46□□□□□ -1.22
XRN1-205ENST00000465507 GOPCQ9HD26 462 aa7.46□□□□□ -1.22
XRN1-205ENST00000465507 DACH1Q9UI36 760 aa7.46□□□□□ -1.22
XRN1-205ENST00000465507 USP17L8P0C7I0 530 aa7.45□□□□□ -1.22
XRN1-205ENST00000465507 PTCRAQ6ISU1 281 aaPredicted RBP7.45□□□□□ -1.22
XRN1-205ENST00000465507 TTC24A2A3L6 582 aaPredicted RBP7.44□□□□□ -1.22
XRN1-205ENST00000465507 WNT7AO00755 349 aa7.44□□□□□ -1.22
XRN1-205ENST00000465507 AVPP01185 164 aa7.44□□□□□ -1.22
XRN1-205ENST00000465507 PTPRNQ16849 979 aa7.44□□□□□ -1.22
XRN1-205ENST00000465507 CRIPAKQ8N1N5 446 aa7.44□□□□□ -1.22
XRN1-205ENST00000465507 NR6A1Q15406 480 aa7.43□□□□□ -1.22
XRN1-205ENST00000465507 PPP2R2DQ66LE6 453 aa7.43□□□□□ -1.22
XRN1-205ENST00000465507 LYPD8Q6UX82 237 aa7.43□□□□□ -1.22
XRN1-205ENST00000465507 MRGPRX2Q96LB1 330 aa7.43□□□□□ -1.22
XRN1-205ENST00000465507 HMX1Q9NP08 348 aaPredicted RBP7.43□□□□□ -1.22
XRN1-205ENST00000465507 AXIN1O15169 862 aa7.42□□□□□ -1.22
XRN1-205ENST00000465507 SMPD1P17405 629 aa7.42□□□□□ -1.22
XRN1-205ENST00000465507 KCNH2Q12809 1159 aa7.42□□□□□ -1.22
XRN1-205ENST00000465507 EPS8L1Q8TE68 723 aa7.42□□□□□ -1.22
XRN1-205ENST00000465507 UNC93B1Q9H1C4 597 aa7.42□□□□□ -1.22
XRN1-205ENST00000465507 SNRKQ9NRH2 765 aa7.42□□□□□ -1.22
XRN1-205ENST00000465507 AGERQ15109 404 aa7.41□□□□□ -1.22
XRN1-205ENST00000465507 BAP1Q92560 729 aa7.41□□□□□ -1.22
XRN1-205ENST00000465507 GMPR2Q9P2T1 348 aaKnown RBP7.41□□□□□ -1.22
XRN1-205ENST00000465507 J3QL48 77 aa7.4□□□□□ -1.22
XRN1-205ENST00000465507 SKOR1P84550 965 aa7.4□□□□□ -1.22
XRN1-205ENST00000465507 CTC1Q2NKJ3 1217 aa7.4□□□□□ -1.22
XRN1-205ENST00000465507 TMEM259Q4ZIN3 620 aa7.4□□□□□ -1.22
XRN1-205ENST00000465507 DESI1Q6ICB0 168 aa7.4□□□□□ -1.22
XRN1-205ENST00000465507 SNIP1Q8TAD8 396 aaKnown RBP7.4□□□□□ -1.22
XRN1-205ENST00000465507 EVA1BQ9NVM1 165 aa7.4□□□□□ -1.22
XRN1-205ENST00000465507 SMCPP49901 116 aaPredicted RBP7.39□□□□□ -1.23
XRN1-205ENST00000465507 CARD14Q9BXL6 1004 aa7.38□□□□□ -1.23
XRN1-205ENST00000465507 F12P00748 615 aaPredicted RBP7.37□□□□□ -1.23
XRN1-205ENST00000465507 RC3H1Q5TC82 1133 aaKnown RBP7.37□□□□□ -1.23
XRN1-205ENST00000465507 HPS1Q92902 700 aa7.37□□□□□ -1.23
XRN1-205ENST00000465507 MAGEB6P1A0A0J9YX57 407 aa7.36□□□□□ -1.23
XRN1-205ENST00000465507 C11orf95C9JLR9 678 aaPredicted RBP7.36□□□□□ -1.23
XRN1-205ENST00000465507 WNT7BP56706 349 aa7.36□□□□□ -1.23
XRN1-205ENST00000465507 EHBP1Q8NDI1 1231 aa7.35□□□□□ -1.23
XRN1-205ENST00000465507 FOXJ1Q92949 421 aa7.35□□□□□ -1.23
XRN1-205ENST00000465507 ATP13A2Q9NQ11 1180 aa7.35□□□□□ -1.23
XRN1-205ENST00000465507 SH3BP2P78314 561 aa7.34□□□□□ -1.23
XRN1-205ENST00000465507 ARID5BQ14865 1188 aa7.34□□□□□ -1.23
XRN1-205ENST00000465507 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.23
XRN1-205ENST00000465507 TREML4Q6UXN2 200 aa7.34□□□□□ -1.23
XRN1-205ENST00000465507 ZNF511Q8NB15 262 aa7.34□□□□□ -1.23
XRN1-205ENST00000465507 MTMR14Q8NCE2 650 aa7.34□□□□□ -1.23
XRN1-205ENST00000465507 ALDH1A1P00352 501 aa7.33□□□□□ -1.24
XRN1-205ENST00000465507 ABL2P42684 1182 aa7.33□□□□□ -1.24
XRN1-205ENST00000465507 FKBPLQ9UIM3 349 aa7.33□□□□□ -1.24
XRN1-205ENST00000465507 TBC1D2BQ9UPU7 963 aa7.33□□□□□ -1.24
XRN1-205ENST00000465507 SNRPBP14678 240 aaKnown RBP7.32□□□□□ -1.24
XRN1-205ENST00000465507 BANK1Q8NDB2 785 aa7.32□□□□□ -1.24
XRN1-205ENST00000465507 TRIM34Q9BYJ4 488 aa7.32□□□□□ -1.24
XRN1-205ENST00000465507 GDPD2Q9HCC8 539 aa7.32□□□□□ -1.24
XRN1-205ENST00000465507 UBTFP17480 764 aaKnown RBP7.31□□□□□ -1.24
XRN1-205ENST00000465507 MCM6Q14566 821 aa7.31□□□□□ -1.24
XRN1-205ENST00000465507 NBPF14Q5TI25 921 aa7.31□□□□□ -1.24
XRN1-205ENST00000465507 PNMA1Q8ND90 353 aa7.31□□□□□ -1.24
XRN1-205ENST00000465507 ARMC2Q8NEN0 867 aa7.31□□□□□ -1.24
XRN1-205ENST00000465507 GJD4Q96KN9 370 aaPredicted RBP7.31□□□□□ -1.24
XRN1-205ENST00000465507 ARHGAP9Q9BRR9 750 aa7.31□□□□□ -1.24
XRN1-205ENST00000465507 GTF3C3Q9Y5Q9 886 aa7.31□□□□□ -1.24
XRN1-205ENST00000465507 TLL2Q9Y6L7 1015 aa7.31□□□□□ -1.24
XRN1-205ENST00000465507 ZBTB33Q86T24 672 aa7.3□□□□□ -1.24
XRN1-205ENST00000465507 POM121Q96HA1 1249 aa7.3□□□□□ -1.24
XRN1-205ENST00000465507 NDUFB9Q9Y6M9 179 aa7.3□□□□□ -1.24
XRN1-205ENST00000465507 SIAH2O43255 324 aa7.29□□□□□ -1.24
XRN1-205ENST00000465507 RAB15P59190 212 aa7.29□□□□□ -1.24
XRN1-205ENST00000465507 TRIM47Q96LD4 638 aa7.29□□□□□ -1.24
XRN1-205ENST00000465507 APBB1O00213 710 aa7.28□□□□□ -1.24
XRN1-205ENST00000465507 WFS1O76024 890 aa7.28□□□□□ -1.24
XRN1-205ENST00000465507 NFX1Q12986 1120 aaKnown RBP7.28□□□□□ -1.24
XRN1-205ENST00000465507 CLUAP1Q96AJ1 413 aa7.28□□□□□ -1.24
XRN1-205ENST00000465507 PRM3Q9NNZ6 103 aa7.28□□□□□ -1.24
XRN1-205ENST00000465507 RAD21O60216 631 aa7.27□□□□□ -1.25
XRN1-205ENST00000465507 BMP1P13497 986 aa7.27□□□□□ -1.25
XRN1-205ENST00000465507 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
XRN1-205ENST00000465507 BPHLQ86WA6 291 aaPredicted RBP7.27□□□□□ -1.25
XRN1-205ENST00000465507 SENP2Q9HC62 589 aa7.27□□□□□ -1.25
XRN1-205ENST00000465507 PTK2Q05397 1052 aa7.26□□□□□ -1.25
XRN1-205ENST00000465507 VAC14Q08AM6 782 aa7.26□□□□□ -1.25
XRN1-205ENST00000465507 FLIIQ13045 1269 aa7.26□□□□□ -1.25
XRN1-205ENST00000465507 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
XRN1-205ENST00000465507 PCDHB9Q9Y5E1 797 aa7.26□□□□□ -1.25
XRN1-205ENST00000465507 WASF2Q9Y6W5 498 aa7.26□□□□□ -1.25
XRN1-205ENST00000465507 FAM174AQ8TBP5 190 aa7.25□□□□□ -1.25
XRN1-205ENST00000465507 ADAM32Q8TC27 787 aa7.25□□□□□ -1.25
XRN1-205ENST00000465507 FBXO45P0C2W1 286 aa7.24□□□□□ -1.25
XRN1-205ENST00000465507 VARSP26640 1264 aaKnown RBP7.24□□□□□ -1.25
XRN1-205ENST00000465507 PDXDC2PQ6P474 469 aa7.24□□□□□ -1.25
XRN1-205ENST00000465507 VASH1Q7L8A9 365 aaPredicted RBP7.24□□□□□ -1.25
XRN1-205ENST00000465507 SH3BP5LQ7L8J4 393 aa7.24□□□□□ -1.25
XRN1-205ENST00000465507 TRIM46Q7Z4K8 759 aa7.24□□□□□ -1.25
XRN1-205ENST00000465507 DZIP3Q86Y13 1208 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms