RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 TRIM34Q9BYJ4 488 aa9.7□□□□□ -0.86
CACNA1C-223ENST00000465278 SLC6A16Q9GZN6 736 aa9.7□□□□□ -0.86
CACNA1C-223ENST00000465278 WDR62O43379 1518 aa9.7□□□□□ -0.86
CACNA1C-223ENST00000465278 A6NJR5 290 aa9.69□□□□□ -0.86
CACNA1C-223ENST00000465278 CTHP32929 405 aa9.69□□□□□ -0.86
CACNA1C-223ENST00000465278 KCNC4Q03721 635 aa9.69□□□□□ -0.86
CACNA1C-223ENST00000465278 MSS51Q4VC12 460 aa9.69□□□□□ -0.86
CACNA1C-223ENST00000465278 CCDC24Q8N4L8 307 aa9.69□□□□□ -0.86
CACNA1C-223ENST00000465278 DXOO77932 396 aaKnown RBP9.68□□□□□ -0.86
CACNA1C-223ENST00000465278 PRM3Q9NNZ6 103 aa9.68□□□□□ -0.86
CACNA1C-223ENST00000465278 TRAK2O60296 914 aa9.67□□□□□ -0.86
CACNA1C-223ENST00000465278 S1PR4O95977 384 aa9.67□□□□□ -0.86
CACNA1C-223ENST00000465278 MMP16P51512 607 aa9.67□□□□□ -0.86
CACNA1C-223ENST00000465278 MAP10Q9P2G4 905 aa9.67□□□□□ -0.86
CACNA1C-223ENST00000465278 ZNF777Q9ULD5 760 aaPredicted RBP9.67□□□□□ -0.86
CACNA1C-223ENST00000465278 DISP3Q9P2K9 1392 aa9.66□□□□□ -0.86
CACNA1C-223ENST00000465278 ARID3CA6NKF2 412 aa9.66□□□□□ -0.86
CACNA1C-223ENST00000465278 PPEF1O14829 653 aaPredicted RBP9.66□□□□□ -0.86
CACNA1C-223ENST00000465278 APBB1O00213 710 aa9.65□□□□□ -0.86
CACNA1C-223ENST00000465278 PTPRNQ16849 979 aa9.65□□□□□ -0.86
CACNA1C-223ENST00000465278 PROSER2Q86WR7 435 aaPredicted RBP9.65□□□□□ -0.86
CACNA1C-223ENST00000465278 NUDT12Q9BQG2 462 aa9.65□□□□□ -0.86
CACNA1C-223ENST00000465278 EVA1BQ9NVM1 165 aa9.65□□□□□ -0.86
CACNA1C-223ENST00000465278 NDUFB9Q9Y6M9 179 aa9.65□□□□□ -0.86
CACNA1C-223ENST00000465278 CCNYL3P0C7X3 344 aa9.64□□□□□ -0.87
CACNA1C-223ENST00000465278 PTCRAQ6ISU1 281 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-223ENST00000465278 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-223ENST00000465278 ZNF330Q9Y3S2 320 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-223ENST00000465278 SPATA31D1Q6ZQQ2 1576 aa9.63□□□□□ -0.87
CACNA1C-223ENST00000465278 F12P00748 615 aaPredicted RBP9.63□□□□□ -0.87
CACNA1C-223ENST00000465278 KCNH2Q12809 1159 aa9.63□□□□□ -0.87
CACNA1C-223ENST00000465278 ITGBL1O95965 494 aaPredicted RBP9.62□□□□□ -0.87
CACNA1C-223ENST00000465278 IRF5Q13568 498 aa9.61□□□□□ -0.87
CACNA1C-223ENST00000465278 NCAPD3P42695 1498 aa9.6□□□□□ -0.87
CACNA1C-223ENST00000465278 MRC2Q9UBG0 1479 aa9.6□□□□□ -0.87
CACNA1C-223ENST00000465278 GPR37L1O60883 481 aa9.6□□□□□ -0.87
CACNA1C-223ENST00000465278 FCF1Q9Y324 198 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-223ENST00000465278 RNF223E7ERA6 249 aa9.58□□□□□ -0.88
CACNA1C-223ENST00000465278 VAC14Q08AM6 782 aa9.58□□□□□ -0.88
CACNA1C-223ENST00000465278 PPP1R18Q6NYC8 613 aa9.58□□□□□ -0.88
CACNA1C-223ENST00000465278 WWC1Q8IX03 1113 aa9.58□□□□□ -0.88
CACNA1C-223ENST00000465278 C1orf115Q9H7X2 142 aa9.58□□□□□ -0.88
CACNA1C-223ENST00000465278 FKBPLQ9UIM3 349 aa9.58□□□□□ -0.88
CACNA1C-223ENST00000465278 POM121CA8CG34 1229 aa9.57□□□□□ -0.88
CACNA1C-223ENST00000465278 UNC93B1Q9H1C4 597 aa9.56□□□□□ -0.88
CACNA1C-223ENST00000465278 KIF13AQ9H1H9 1805 aa9.56□□□□□ -0.88
CACNA1C-223ENST00000465278 PNMA1Q8ND90 353 aa9.55□□□□□ -0.88
CACNA1C-223ENST00000465278 BAP1Q92560 729 aa9.55□□□□□ -0.88
CACNA1C-223ENST00000465278 ARID3AQ99856 593 aa9.55□□□□□ -0.88
CACNA1C-223ENST00000465278 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-223ENST00000465278 GGCXP38435 758 aa9.54□□□□□ -0.88
CACNA1C-223ENST00000465278 PDS5BQ9NTI5 1447 aa9.54□□□□□ -0.88
CACNA1C-223ENST00000465278 HMGXB3Q12766 1538 aa9.53□□□□□ -0.88
CACNA1C-223ENST00000465278 WASHC4Q2M389 1173 aa9.53□□□□□ -0.88
CACNA1C-223ENST00000465278 LINC01559Q495D7 138 aa9.53□□□□□ -0.88
CACNA1C-223ENST00000465278 PLA2G2CQ5R387 149 aa9.53□□□□□ -0.88
CACNA1C-223ENST00000465278 ARMC2Q8NEN0 867 aa9.53□□□□□ -0.88
CACNA1C-223ENST00000465278 CHD1O14646 1710 aa9.52□□□□□ -0.89
CACNA1C-223ENST00000465278 HDGFL1Q5TGJ6 251 aa9.52□□□□□ -0.89
CACNA1C-223ENST00000465278 RSF1Q96T23 1441 aaPredicted RBP9.52□□□□□ -0.89
CACNA1C-223ENST00000465278 ZBTB24O43167 697 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-223ENST00000465278 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
CACNA1C-223ENST00000465278 ANKLE1Q8NAG6 615 aa9.51□□□□□ -0.89
CACNA1C-223ENST00000465278 ZBBXA8MT70 800 aa9.5□□□□□ -0.89
CACNA1C-223ENST00000465278 PDXDC2PQ6P474 469 aa9.5□□□□□ -0.89
CACNA1C-223ENST00000465278 PLA2G2EQ9NZK7 142 aa9.5□□□□□ -0.89
CACNA1C-223ENST00000465278 SYNJ2O15056 1496 aa9.49□□□□□ -0.89
CACNA1C-223ENST00000465278 NR1H3Q13133 447 aa9.49□□□□□ -0.89
CACNA1C-223ENST00000465278 FOXJ1Q92949 421 aa9.49□□□□□ -0.89
CACNA1C-223ENST00000465278 CALR3Q96L12 384 aaKnown RBP9.49□□□□□ -0.89
CACNA1C-223ENST00000465278 PTK2Q05397 1052 aa9.48□□□□□ -0.89
CACNA1C-223ENST00000465278 AGERQ15109 404 aa9.48□□□□□ -0.89
CACNA1C-223ENST00000465278 OCSTAMPQ9BR26 566 aa9.48□□□□□ -0.89
CACNA1C-223ENST00000465278 PLSCR2Q9NRY7 297 aa9.48□□□□□ -0.89
CACNA1C-223ENST00000465278 NBPF14Q5TI25 921 aa9.47□□□□□ -0.89
CACNA1C-223ENST00000465278 LIAT1Q6ZQX7 453 aa9.47□□□□□ -0.89
CACNA1C-223ENST00000465278 ADAMTS19Q8TE59 1207 aa9.47□□□□□ -0.89
CACNA1C-223ENST00000465278 GLMNQ92990 594 aa9.47□□□□□ -0.89
CACNA1C-223ENST00000465278 ARHGAP9Q9BRR9 750 aa9.47□□□□□ -0.89
CACNA1C-223ENST00000465278 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
CACNA1C-223ENST00000465278 ZC3H4Q9UPT8 1303 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-223ENST00000465278 MAGEB6P1A0A0J9YX57 407 aa9.46□□□□□ -0.9
CACNA1C-223ENST00000465278 SH3BP2P78314 561 aa9.46□□□□□ -0.9
CACNA1C-223ENST00000465278 SEMA3FQ13275 785 aa9.46□□□□□ -0.9
CACNA1C-223ENST00000465278 ZBTB33Q86T24 672 aa9.46□□□□□ -0.9
CACNA1C-223ENST00000465278 CCDC82Q8N4S0 544 aa9.46□□□□□ -0.9
CACNA1C-223ENST00000465278 ZNF511Q8NB15 262 aa9.46□□□□□ -0.9
CACNA1C-223ENST00000465278 GPKOWQ92917 476 aaPredicted RBP eCLIP9.46□□□□□ -0.9
CACNA1C-223ENST00000465278 ALG2Q9H553 416 aa9.46□□□□□ -0.9
CACNA1C-223ENST00000465278 EIF4G2P78344 907 aaKnown RBP eCLIP9.45□□□□□ -0.9
CACNA1C-223ENST00000465278 CD2BP2O95400 341 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-223ENST00000465278 TRIM32Q13049 653 aa9.44□□□□□ -0.9
CACNA1C-223ENST00000465278 SH3BP5LQ7L8J4 393 aa9.44□□□□□ -0.9
CACNA1C-223ENST00000465278 ADAM32Q8TC27 787 aa9.44□□□□□ -0.9
CACNA1C-223ENST00000465278 EMID1Q96A84 441 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-223ENST00000465278 C4orf48Q5BLP8 95 aa9.43□□□□□ -0.9
CACNA1C-223ENST00000465278 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
CACNA1C-223ENST00000465278 GPSM3Q9Y4H4 160 aa9.43□□□□□ -0.9
CACNA1C-223ENST00000465278 PCDHB9Q9Y5E1 797 aa9.43□□□□□ -0.9
CACNA1C-223ENST00000465278 SLC19A1P41440 591 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms