RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 HDGFP51858 240 aaKnown RBP11.32□□□□□ -0.6
SHQ1-203ENST00000463369 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.32□□□□□ -0.6
SHQ1-203ENST00000463369 NRXN3Q9Y4C0 1643 aa11.32□□□□□ -0.6
SHQ1-203ENST00000463369 POLR1AO95602 1720 aaPredicted RBP11.31□□□□□ -0.6
SHQ1-203ENST00000463369 NUTM2DQ5VT03 806 aaPredicted RBP11.31□□□□□ -0.6
SHQ1-203ENST00000463369 EXOC6Q8TAG9 804 aa11.31□□□□□ -0.6
SHQ1-203ENST00000463369 ZNF592Q92610 1267 aa11.31□□□□□ -0.6
SHQ1-203ENST00000463369 KIF7Q2M1P5 1343 aa11.31□□□□□ -0.6
SHQ1-203ENST00000463369 GPRASP1Q5JY77 1395 aa11.31□□□□□ -0.6
SHQ1-203ENST00000463369 ROCK2O75116 1388 aaKnown RBP11.3□□□□□ -0.6
SHQ1-203ENST00000463369 HOXD11P31277 338 aaPredicted RBP11.3□□□□□ -0.6
SHQ1-203ENST00000463369 RRP1P56182 461 aaKnown RBP11.3□□□□□ -0.6
SHQ1-203ENST00000463369 NBPF1Q3BBV0 1214 aa11.3□□□□□ -0.6
SHQ1-203ENST00000463369 C14orf93Q9H972 538 aaKnown RBP11.3□□□□□ -0.6
SHQ1-203ENST00000463369 ALKQ9UM73 1620 aa11.3□□□□□ -0.6
SHQ1-203ENST00000463369 GLIPR1L2Q4G1C9 344 aa11.29□□□□□ -0.6
SHQ1-203ENST00000463369 CFAP70Q5T0N1 1121 aa11.29□□□□□ -0.6
SHQ1-203ENST00000463369 CERS3Q8IU89 383 aa11.29□□□□□ -0.6
SHQ1-203ENST00000463369 CARD11Q9BXL7 1154 aa11.28□□□□□ -0.6
SHQ1-203ENST00000463369 ADGRB1O14514 1584 aa11.28□□□□□ -0.6
SHQ1-203ENST00000463369 LTKP29376 864 aa11.28□□□□□ -0.6
SHQ1-203ENST00000463369 PNISRQ8TF01 805 aaKnown RBP11.28□□□□□ -0.6
SHQ1-203ENST00000463369 TXNDC2Q86VQ3 553 aa11.27□□□□□ -0.61
SHQ1-203ENST00000463369 EID1Q9Y6B2 187 aa11.27□□□□□ -0.61
SHQ1-203ENST00000463369 SCAF11Q99590 1463 aaKnown RBP11.26□□□□□ -0.61
SHQ1-203ENST00000463369 ARHGEF28Q8N1W1 1705 aaKnown RBP11.26□□□□□ -0.61
SHQ1-203ENST00000463369 USP47Q96K76 1375 aa11.26□□□□□ -0.61
SHQ1-203ENST00000463369 PLEKHG1Q9ULL1 1385 aa11.26□□□□□ -0.61
SHQ1-203ENST00000463369 IRF5Q13568 498 aa11.25□□□□□ -0.61
SHQ1-203ENST00000463369 ASXL1Q8IXJ9 1541 aa11.25□□□□□ -0.61
SHQ1-203ENST00000463369 CLUAP1Q96AJ1 413 aa11.24□□□□□ -0.61
SHQ1-203ENST00000463369 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.24□□□□□ -0.61
SHQ1-203ENST00000463369 ZMYND10O75800 440 aa11.24□□□□□ -0.61
SHQ1-203ENST00000463369 SLC4A3P48751 1232 aa11.24□□□□□ -0.61
SHQ1-203ENST00000463369 TICAM2Q86XR7 235 aa11.24□□□□□ -0.61
SHQ1-203ENST00000463369 RCAN3Q9UKA8 241 aa11.24□□□□□ -0.61
SHQ1-203ENST00000463369 DIP2AQ14689 1571 aa11.24□□□□□ -0.61
SHQ1-203ENST00000463369 KNDC1Q76NI1 1749 aa11.24□□□□□ -0.61
SHQ1-203ENST00000463369 MED14O60244 1454 aa11.23□□□□□ -0.61
SHQ1-203ENST00000463369 TMED8Q6PL24 325 aaPredicted RBP11.23□□□□□ -0.61
SHQ1-203ENST00000463369 ANKLE2Q86XL3 938 aa11.23□□□□□ -0.61
SHQ1-203ENST00000463369 CHD2O14647 1828 aaKnown RBP11.23□□□□□ -0.61
SHQ1-203ENST00000463369 ADAMTS13Q76LX8 1427 aa11.23□□□□□ -0.61
SHQ1-203ENST00000463369 FRAT2O75474 233 aaPredicted RBP11.23□□□□□ -0.61
SHQ1-203ENST00000463369 TMEM132EQ6IEE7 984 aa11.23□□□□□ -0.61
SHQ1-203ENST00000463369 RETREG2Q8NC44 543 aa11.23□□□□□ -0.61
SHQ1-203ENST00000463369 STRCQ7RTU9 1775 aa11.22□□□□□ -0.61
SHQ1-203ENST00000463369 LMTK3Q96Q04 1460 aa11.22□□□□□ -0.61
SHQ1-203ENST00000463369 QRICH2Q9H0J4 1663 aa11.22□□□□□ -0.61
SHQ1-203ENST00000463369 SENP3-EIF4A1A0A087X0R7 540 aa11.22□□□□□ -0.61
SHQ1-203ENST00000463369 TRAK2O60296 914 aa11.22□□□□□ -0.61
SHQ1-203ENST00000463369 TMC1Q8TDI8 760 aa11.21□□□□□ -0.61
SHQ1-203ENST00000463369 LRPPRCP42704 1394 aaKnown RBP11.21□□□□□ -0.61
SHQ1-203ENST00000463369 ST20-MTHFSA0A0A6YYL1 179 aa11.21□□□□□ -0.62
SHQ1-203ENST00000463369 FBXW7Q969H0 707 aa11.21□□□□□ -0.62
SHQ1-203ENST00000463369 YTHDC2Q9H6S0 1430 aaKnown RBP11.2□□□□□ -0.62
SHQ1-203ENST00000463369 EIF3AQ14152 1382 aaKnown RBP11.2□□□□□ -0.62
SHQ1-203ENST00000463369 PSMD1Q99460 953 aa11.2□□□□□ -0.62
SHQ1-203ENST00000463369 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
SHQ1-203ENST00000463369 RRAGDQ9NQL2 400 aaPredicted RBP11.2□□□□□ -0.62
SHQ1-203ENST00000463369 TBX22Q9Y458 520 aa11.2□□□□□ -0.62
SHQ1-203ENST00000463369 METP08581 1390 aa11.19□□□□□ -0.62
SHQ1-203ENST00000463369 DLC1Q96QB1 1528 aa11.19□□□□□ -0.62
SHQ1-203ENST00000463369 MKRN4PQ13434 485 aaPredicted RBP11.18□□□□□ -0.62
SHQ1-203ENST00000463369 CNGB1Q14028 1251 aaPredicted RBP11.18□□□□□ -0.62
SHQ1-203ENST00000463369 CCDC125Q86Z20 511 aa11.18□□□□□ -0.62
SHQ1-203ENST00000463369 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
SHQ1-203ENST00000463369 TRAK1Q9UPV9 953 aa11.18□□□□□ -0.62
SHQ1-203ENST00000463369 NPHP4O75161 1426 aaPredicted RBP11.18□□□□□ -0.62
SHQ1-203ENST00000463369 PDE3BQ13370 1112 aa11.18□□□□□ -0.62
SHQ1-203ENST00000463369 SLC26A8Q96RN1 970 aa11.18□□□□□ -0.62
SHQ1-203ENST00000463369 ABCC11Q96J66 1382 aa11.17□□□□□ -0.62
SHQ1-203ENST00000463369 XRN1Q8IZH2 1706 aaKnown RBP11.17□□□□□ -0.62
SHQ1-203ENST00000463369 SKAP1Q86WV1 359 aa11.17□□□□□ -0.62
SHQ1-203ENST00000463369 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
SHQ1-203ENST00000463369 TESK2Q96S53 571 aa11.17□□□□□ -0.62
SHQ1-203ENST00000463369 NCKAP5LQ9HCH0 1330 aa11.17□□□□□ -0.62
SHQ1-203ENST00000463369 TECPR2O15040 1411 aa11.17□□□□□ -0.62
SHQ1-203ENST00000463369 CPS1P31327 1500 aa11.16□□□□□ -0.62
SHQ1-203ENST00000463369 HSPA2P54652 639 aa11.16□□□□□ -0.62
SHQ1-203ENST00000463369 BARGINQ6ZT62 677 aa11.16□□□□□ -0.62
SHQ1-203ENST00000463369 STK26Q9P289 416 aa11.16□□□□□ -0.62
SHQ1-203ENST00000463369 PIK3R4Q99570 1358 aa11.16□□□□□ -0.62
SHQ1-203ENST00000463369 SBNO2Q9Y2G9 1366 aa11.16□□□□□ -0.62
SHQ1-203ENST00000463369 CENPJQ9HC77 1338 aaPredicted RBP11.15□□□□□ -0.62
SHQ1-203ENST00000463369 BRD4O60885 1362 aaPredicted RBP11.15□□□□□ -0.62
SHQ1-203ENST00000463369 PTPRUQ92729 1446 aa11.15□□□□□ -0.62
SHQ1-203ENST00000463369 RRP9O43818 475 aaKnown RBP11.15□□□□□ -0.63
SHQ1-203ENST00000463369 FAM161AQ3B820 660 aa11.15□□□□□ -0.63
SHQ1-203ENST00000463369 SIRT1Q96EB6 747 aa11.15□□□□□ -0.63
SHQ1-203ENST00000463369 FGD1P98174 961 aa11.14□□□□□ -0.63
SHQ1-203ENST00000463369 HSP90AA2PQ14568 343 aaPredicted RBP11.14□□□□□ -0.63
SHQ1-203ENST00000463369 L1TD1Q5T7N2 865 aaKnown RBP11.14□□□□□ -0.63
SHQ1-203ENST00000463369 CRBNQ96SW2 442 aa11.13□□□□□ -0.63
SHQ1-203ENST00000463369 FAM135BQ49AJ0 1406 aa11.13□□□□□ -0.63
SHQ1-203ENST00000463369 CLSTN1O94985 981 aa11.13□□□□□ -0.63
SHQ1-203ENST00000463369 C8orf34Q49A92 452 aa11.13□□□□□ -0.63
SHQ1-203ENST00000463369 KDM2BQ8NHM5 1336 aa11.13□□□□□ -0.63
SHQ1-203ENST00000463369 STRCP1A6NGW2 1772 aa11.13□□□□□ -0.63
SHQ1-203ENST00000463369 KTN1Q86UP2 1357 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms