RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 QTRT2Q9H974 415 aaKnown RBP12.25□□□□□ -0.45
TMEM254-208ENST00000463209 CABP1Q9NZU7 370 aa12.25□□□□□ -0.45
TMEM254-208ENST00000463209 EVC2Q86UK5 1308 aa12.25□□□□□ -0.45
TMEM254-208ENST00000463209 RGS12O14924 1447 aa12.25□□□□□ -0.45
TMEM254-208ENST00000463209 RXRBP28702 533 aa12.24□□□□□ -0.45
TMEM254-208ENST00000463209 AKAP12Q02952 1782 aa12.24□□□□□ -0.45
TMEM254-208ENST00000463209 BCL9LQ86UU0 1499 aa12.24□□□□□ -0.45
TMEM254-208ENST00000463209 ATRNO75882 1429 aa12.23□□□□□ -0.45
TMEM254-208ENST00000463209 PLEKHG3A1L390 1219 aa12.23□□□□□ -0.45
TMEM254-208ENST00000463209 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
TMEM254-208ENST00000463209 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.23□□□□□ -0.45
TMEM254-208ENST00000463209 PIK3C2AO00443 1686 aa12.22□□□□□ -0.45
TMEM254-208ENST00000463209 NRKQ7Z2Y5 1582 aa12.22□□□□□ -0.45
TMEM254-208ENST00000463209 FNBP4Q8N3X1 1017 aaPredicted RBP12.22□□□□□ -0.45
TMEM254-208ENST00000463209 SLIT2O94813 1529 aa12.21□□□□□ -0.45
TMEM254-208ENST00000463209 USP6P35125 1406 aa12.21□□□□□ -0.45
TMEM254-208ENST00000463209 NWD2Q9ULI1 1742 aa12.21□□□□□ -0.45
TMEM254-208ENST00000463209 ST20-MTHFSA0A0A6YYL1 179 aa12.21□□□□□ -0.45
TMEM254-208ENST00000463209 GLI3P10071 1580 aa12.21□□□□□ -0.46
TMEM254-208ENST00000463209 COL14A1Q05707 1796 aaKnown RBP12.2□□□□□ -0.46
TMEM254-208ENST00000463209 MON2Q7Z3U7 1717 aa12.2□□□□□ -0.46
TMEM254-208ENST00000463209 USP47Q96K76 1375 aa12.2□□□□□ -0.46
TMEM254-208ENST00000463209 FAM83GA6ND36 823 aa12.2□□□□□ -0.46
TMEM254-208ENST00000463209 SBNO2Q9Y2G9 1366 aa12.19□□□□□ -0.46
TMEM254-208ENST00000463209 RBM6P78332 1123 aaKnown RBP12.19□□□□□ -0.46
TMEM254-208ENST00000463209 CHRNA2Q15822 529 aa12.19□□□□□ -0.46
TMEM254-208ENST00000463209 ABTB2Q8N961 1025 aa12.19□□□□□ -0.46
TMEM254-208ENST00000463209 TRPC5Q9UL62 973 aaPredicted RBP12.19□□□□□ -0.46
TMEM254-208ENST00000463209 CD163L1Q9NR16 1453 aa12.19□□□□□ -0.46
TMEM254-208ENST00000463209 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
TMEM254-208ENST00000463209 CLSPNQ9HAW4 1339 aa12.18□□□□□ -0.46
TMEM254-208ENST00000463209 ZC3H6P61129 1189 aaKnown RBP12.18□□□□□ -0.46
TMEM254-208ENST00000463209 TMC1Q8TDI8 760 aa12.18□□□□□ -0.46
TMEM254-208ENST00000463209 TESK2Q96S53 571 aa12.18□□□□□ -0.46
TMEM254-208ENST00000463209 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
TMEM254-208ENST00000463209 CDK12Q9NYV4 1490 aaPredicted RBP12.17□□□□□ -0.46
TMEM254-208ENST00000463209 ZBTB7CA1YPR0 619 aa12.17□□□□□ -0.46
TMEM254-208ENST00000463209 UNC5CLQ8IV45 518 aa12.17□□□□□ -0.46
TMEM254-208ENST00000463209 BTG4Q9NY30 223 aa12.17□□□□□ -0.46
TMEM254-208ENST00000463209 SSH2Q76I76 1423 aa12.17□□□□□ -0.46
TMEM254-208ENST00000463209 KTN1Q86UP2 1357 aaKnown RBP12.17□□□□□ -0.46
TMEM254-208ENST00000463209 SOX12O15370 315 aa12.16□□□□□ -0.46
TMEM254-208ENST00000463209 SLC12A5Q9H2X9 1139 aa12.16□□□□□ -0.46
TMEM254-208ENST00000463209 PRDM11Q9NQV5 511 aa12.16□□□□□ -0.46
TMEM254-208ENST00000463209 ZRANB1Q9UGI0 708 aa12.16□□□□□ -0.46
TMEM254-208ENST00000463209 CCDC9Q9Y3X0 531 aaKnown RBP12.16□□□□□ -0.46
TMEM254-208ENST00000463209 CPSF1Q10570 1443 aaKnown RBP12.16□□□□□ -0.46
TMEM254-208ENST00000463209 BRWD3Q6RI45 1802 aa12.16□□□□□ -0.46
TMEM254-208ENST00000463209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM254-208ENST00000463209 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
TMEM254-208ENST00000463209 USP19O94966 1318 aa12.14□□□□□ -0.47
TMEM254-208ENST00000463209 LMO7Q8WWI1 1683 aa12.14□□□□□ -0.47
TMEM254-208ENST00000463209 NLRP6P59044 892 aa12.14□□□□□ -0.47
TMEM254-208ENST00000463209 SLIT3O75094 1523 aa12.14□□□□□ -0.47
TMEM254-208ENST00000463209 A0A1W2PP64 1363 aa12.14□□□□□ -0.47
TMEM254-208ENST00000463209 TTC21BQ7Z4L5 1316 aa12.13□□□□□ -0.47
TMEM254-208ENST00000463209 MYOM1P52179 1685 aa12.13□□□□□ -0.47
TMEM254-208ENST00000463209 NME9Q86XW9 330 aa12.13□□□□□ -0.47
TMEM254-208ENST00000463209 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
TMEM254-208ENST00000463209 CAMTA1Q9Y6Y1 1673 aa12.13□□□□□ -0.47
TMEM254-208ENST00000463209 VPS72Q15906 364 aa12.12□□□□□ -0.47
TMEM254-208ENST00000463209 NLRP13Q86W25 1043 aa12.12□□□□□ -0.47
TMEM254-208ENST00000463209 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
TMEM254-208ENST00000463209 RGPD5Q99666 1765 aa12.11□□□□□ -0.47
TMEM254-208ENST00000463209 GCP02774 474 aa12.11□□□□□ -0.47
TMEM254-208ENST00000463209 NFAT5O94916 1531 aa12.11□□□□□ -0.47
TMEM254-208ENST00000463209 A0A0G2JS52 829 aa12.1□□□□□ -0.47
TMEM254-208ENST00000463209 MYT1Q01538 1121 aa12.1□□□□□ -0.47
TMEM254-208ENST00000463209 FAM98CQ17RN3 349 aaKnown RBP12.1□□□□□ -0.47
TMEM254-208ENST00000463209 PIAS4Q8N2W9 510 aaPredicted RBP12.1□□□□□ -0.47
TMEM254-208ENST00000463209 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.47
TMEM254-208ENST00000463209 COL18A1P39060 1754 aa12.1□□□□□ -0.47
TMEM254-208ENST00000463209 USP54Q70EL1 1684 aa12.1□□□□□ -0.47
TMEM254-208ENST00000463209 BRD4O60885 1362 aaPredicted RBP12.09□□□□□ -0.47
TMEM254-208ENST00000463209 CPDO75976 1380 aa12.09□□□□□ -0.47
TMEM254-208ENST00000463209 TMF1P82094 1093 aa12.09□□□□□ -0.47
TMEM254-208ENST00000463209 HDGFL2Q7Z4V5 671 aaPredicted RBP12.09□□□□□ -0.47
TMEM254-208ENST00000463209 SEPT12Q8IYM1 358 aa12.09□□□□□ -0.47
TMEM254-208ENST00000463209 ZNF692Q9BU19 519 aaPredicted RBP12.09□□□□□ -0.47
TMEM254-208ENST00000463209 USP35Q9P2H5 1018 aa12.09□□□□□ -0.47
TMEM254-208ENST00000463209 LTN1O94822 1766 aa12.09□□□□□ -0.47
TMEM254-208ENST00000463209 THSD7AQ9UPZ6 1657 aa12.08□□□□□ -0.48
TMEM254-208ENST00000463209 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
TMEM254-208ENST00000463209 POLR3GLQ9BT43 218 aa12.08□□□□□ -0.48
TMEM254-208ENST00000463209 EDC4Q6P2E9 1401 aaKnown RBP12.08□□□□□ -0.48
TMEM254-208ENST00000463209 SPATA31A5Q5VU36 1347 aa12.08□□□□□ -0.48
TMEM254-208ENST00000463209 SPATA31A7Q8IWB4 1347 aa12.08□□□□□ -0.48
TMEM254-208ENST00000463209 TTC21AQ8NDW8 1320 aa12.08□□□□□ -0.48
TMEM254-208ENST00000463209 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.48
TMEM254-208ENST00000463209 HSPA5P11021 654 aaKnown RBP12.07□□□□□ -0.48
TMEM254-208ENST00000463209 TERF2IPQ9NYB0 399 aa12.07□□□□□ -0.48
TMEM254-208ENST00000463209 EVA1CP58658 441 aa12.06□□□□□ -0.48
TMEM254-208ENST00000463209 FAM182BQ5T319 152 aa12.06□□□□□ -0.48
TMEM254-208ENST00000463209 KIF20BQ96Q89 1820 aa12.06□□□□□ -0.48
TMEM254-208ENST00000463209 SPATA31A1Q5TZJ5 1347 aa12.06□□□□□ -0.48
TMEM254-208ENST00000463209 OVOS2A0A0J9YW53 1432 aa12.05□□□□□ -0.48
TMEM254-208ENST00000463209 OVOS2Q6IE36 1432 aa12.05□□□□□ -0.48
TMEM254-208ENST00000463209 AXIN2Q9Y2T1 843 aa12.05□□□□□ -0.48
TMEM254-208ENST00000463209 ANKRD36BQ8N2N9 1353 aa12.05□□□□□ -0.48
TMEM254-208ENST00000463209 NINLQ9Y2I6 1382 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms