RNA–Protein interactions for RNA: ENST00000461766.1

CDHR3-202, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-202ENST00000461766 PROCA1Q8NCQ7 364 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-202ENST00000461766 SPIRE2Q8WWL2 714 aa6.83□□□□□ -1.32
CDHR3-202ENST00000461766 POLR3EQ9NVU0 708 aa6.83□□□□□ -1.32
CDHR3-202ENST00000461766 FANCD2Q9BXW9 1451 aa6.83□□□□□ -1.32
CDHR3-202ENST00000461766 KIF14Q15058 1648 aa6.83□□□□□ -1.32
CDHR3-202ENST00000461766 TK2O00142 265 aa6.82□□□□□ -1.32
CDHR3-202ENST00000461766 LAPTM4BQ86VI4 370 aa6.82□□□□□ -1.32
CDHR3-202ENST00000461766 RDH13Q8NBN7 331 aa6.82□□□□□ -1.32
CDHR3-202ENST00000461766 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDHR3-202ENST00000461766 NBPF3Q9H094 633 aa6.82□□□□□ -1.32
CDHR3-202ENST00000461766 KTN1Q86UP2 1357 aaKnown RBP6.82□□□□□ -1.32
CDHR3-202ENST00000461766 ARID4BQ4LE39 1312 aaPredicted RBP6.81□□□□□ -1.32
CDHR3-202ENST00000461766 TEX14Q8IWB6 1497 aa6.81□□□□□ -1.32
CDHR3-202ENST00000461766 FLIIQ13045 1269 aa6.81□□□□□ -1.32
CDHR3-202ENST00000461766 NUTM1Q86Y26 1132 aa6.81□□□□□ -1.32
CDHR3-202ENST00000461766 MTUS2Q5JR59 1369 aa6.81□□□□□ -1.32
CDHR3-202ENST00000461766 GRIN2BQ13224 1484 aa6.8□□□□□ -1.32
CDHR3-202ENST00000461766 RPRD2Q5VT52 1461 aaKnown RBP6.8□□□□□ -1.32
CDHR3-202ENST00000461766 BHMG1C9JSJ3 638 aaPredicted RBP6.8□□□□□ -1.32
CDHR3-202ENST00000461766 NEFMP07197 916 aa6.8□□□□□ -1.32
CDHR3-202ENST00000461766 LSM11P83369 360 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDHR3-202ENST00000461766 PTPRKQ15262 1439 aa6.8□□□□□ -1.32
CDHR3-202ENST00000461766 FHOD3Q2V2M9 1422 aa6.8□□□□□ -1.32
CDHR3-202ENST00000461766 RSPH4AQ5TD94 716 aa6.8□□□□□ -1.32
CDHR3-202ENST00000461766 SPATA31E1Q6ZUB1 1445 aa6.8□□□□□ -1.32
CDHR3-202ENST00000461766 FAM9BQ8IZU0 186 aa6.8□□□□□ -1.32
CDHR3-202ENST00000461766 LIMD1Q9UGP4 676 aa6.8□□□□□ -1.32
CDHR3-202ENST00000461766 ATP1B4Q9UN42 357 aaPredicted RBP6.8□□□□□ -1.32
CDHR3-202ENST00000461766 VIRMAQ69YN4 1812 aaKnown RBP6.8□□□□□ -1.32
CDHR3-202ENST00000461766 E9PCH4 1651 aa6.8□□□□□ -1.32
CDHR3-202ENST00000461766 URB2Q14146 1524 aaKnown RBP6.8□□□□□ -1.32
CDHR3-202ENST00000461766 ZMYM4Q5VZL5 1548 aa6.8□□□□□ -1.32
CDHR3-202ENST00000461766 ROCK2O75116 1388 aaKnown RBP6.8□□□□□ -1.32
CDHR3-202ENST00000461766 DENND4BO75064 1496 aaPredicted RBP6.79□□□□□ -1.32
CDHR3-202ENST00000461766 SPTLC1O15269 473 aa6.79□□□□□ -1.32
CDHR3-202ENST00000461766 SLC10A3P09131 477 aa6.79□□□□□ -1.32
CDHR3-202ENST00000461766 GCGRP47871 477 aa6.79□□□□□ -1.32
CDHR3-202ENST00000461766 HDGFP51858 240 aaKnown RBP6.79□□□□□ -1.32
CDHR3-202ENST00000461766 TUSC1Q2TAM9 212 aa6.79□□□□□ -1.32
CDHR3-202ENST00000461766 RSBN1LQ6PCB5 846 aaPredicted RBP6.79□□□□□ -1.32
CDHR3-202ENST00000461766 ANKRD13DQ6ZTN6 518 aa6.79□□□□□ -1.32
CDHR3-202ENST00000461766 RIC3Q7Z5B4 369 aa6.79□□□□□ -1.32
CDHR3-202ENST00000461766 DNMBPQ6XZF7 1577 aa6.78□□□□□ -1.32
CDHR3-202ENST00000461766 ABCA10Q8WWZ4 1543 aa6.78□□□□□ -1.32
CDHR3-202ENST00000461766 MOXD2PA6NHM9 499 aa6.78□□□□□ -1.32
CDHR3-202ENST00000461766 KDM4AO75164 1064 aa6.78□□□□□ -1.32
CDHR3-202ENST00000461766 GJA5P36382 358 aa6.78□□□□□ -1.32
CDHR3-202ENST00000461766 SLC4A3P48751 1232 aa6.78□□□□□ -1.32
CDHR3-202ENST00000461766 CCDC184Q52MB2 194 aa6.78□□□□□ -1.32
CDHR3-202ENST00000461766 ADGRD1Q6QNK2 874 aa6.78□□□□□ -1.32
CDHR3-202ENST00000461766 SAMD7Q7Z3H4 446 aa6.78□□□□□ -1.32
CDHR3-202ENST00000461766 SLF2Q8IX21 1173 aa6.78□□□□□ -1.32
CDHR3-202ENST00000461766 KDM5CP41229 1560 aa6.78□□□□□ -1.32
CDHR3-202ENST00000461766 ADGBQ8N7X0 1667 aa6.77□□□□□ -1.32
CDHR3-202ENST00000461766 USP46P62068 366 aa6.77□□□□□ -1.33
CDHR3-202ENST00000461766 PPP2R2DQ66LE6 453 aa6.77□□□□□ -1.33
CDHR3-202ENST00000461766 INSRP06213 1382 aa6.77□□□□□ -1.33
CDHR3-202ENST00000461766 DHX29Q7Z478 1369 aaKnown RBP6.77□□□□□ -1.33
CDHR3-202ENST00000461766 MBD5Q9P267 1494 aa6.77□□□□□ -1.33
CDHR3-202ENST00000461766 KIF7Q2M1P5 1343 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 RIMBP3CA6NJZ7 1639 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 RIMBP3BA6NNM3 1639 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 KDM6BO15054 1643 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 DNMT1P26358 1616 aaKnown RBP6.76□□□□□ -1.33
CDHR3-202ENST00000461766 RIMBP3Q9UFD9 1639 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 BCORL1Q5H9F3 1711 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 HOXA2O43364 376 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 HRO43593 1189 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 NDUFV2P19404 249 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 RFC5P40937 340 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 MCM6Q14566 821 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 FAM43AQ8N2R8 423 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 MRPL50Q8N5N7 158 aaKnown RBP6.76□□□□□ -1.33
CDHR3-202ENST00000461766 ZFRQ96KR1 1074 aaKnown RBP6.76□□□□□ -1.33
CDHR3-202ENST00000461766 BACH2Q9BYV9 841 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 ZMYND15Q9H091 742 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 LRPPRCP42704 1394 aaKnown RBP6.76□□□□□ -1.33
CDHR3-202ENST00000461766 ROCK1Q13464 1354 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 PLEKHH2Q8IVE3 1493 aa6.76□□□□□ -1.33
CDHR3-202ENST00000461766 ZNF608Q9ULD9 1512 aaPredicted RBP6.76□□□□□ -1.33
CDHR3-202ENST00000461766 BRD4O60885 1362 aaPredicted RBP6.75□□□□□ -1.33
CDHR3-202ENST00000461766 PDE3BQ13370 1112 aa6.75□□□□□ -1.33
CDHR3-202ENST00000461766 FBXO31Q5XUX0 539 aaPredicted RBP6.75□□□□□ -1.33
CDHR3-202ENST00000461766 HCSTQ9UBK5 93 aa6.75□□□□□ -1.33
CDHR3-202ENST00000461766 ANKRD30BQ9BXX2 1392 aa6.74□□□□□ -1.33
CDHR3-202ENST00000461766 RNF40O75150 1001 aa6.74□□□□□ -1.33
CDHR3-202ENST00000461766 CFHP08603 1231 aa6.74□□□□□ -1.33
CDHR3-202ENST00000461766 RRP1P56182 461 aaKnown RBP6.74□□□□□ -1.33
CDHR3-202ENST00000461766 GLIPR1L2Q4G1C9 344 aa6.74□□□□□ -1.33
CDHR3-202ENST00000461766 CYB5RLQ6IPT4 315 aa6.74□□□□□ -1.33
CDHR3-202ENST00000461766 IFT140Q96RY7 1462 aa6.73□□□□□ -1.33
CDHR3-202ENST00000461766 KIF15Q9NS87 1388 aa6.73□□□□□ -1.33
CDHR3-202ENST00000461766 ARHGEF12Q9NZN5 1544 aa6.73□□□□□ -1.33
CDHR3-202ENST00000461766 LILRB3O75022 631 aa6.73□□□□□ -1.33
CDHR3-202ENST00000461766 FDX1P10109 184 aa6.73□□□□□ -1.33
CDHR3-202ENST00000461766 QPCTQ16769 361 aa6.73□□□□□ -1.33
CDHR3-202ENST00000461766 CSPP1Q1MSJ5 1256 aa6.73□□□□□ -1.33
CDHR3-202ENST00000461766 PRPF38BQ5VTL8 546 aaKnown RBP6.73□□□□□ -1.33
CDHR3-202ENST00000461766 BANK1Q8NDB2 785 aa6.73□□□□□ -1.33
CDHR3-202ENST00000461766 NECTIN2Q92692 538 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms