RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 CABLES1Q8TDN4 633 aa5.85□□□□□ -1.47
VCL-203ENST00000461383 GDPD2Q9HCC8 539 aa5.85□□□□□ -1.47
VCL-203ENST00000461383 TOR4AQ9NXH8 423 aa5.85□□□□□ -1.47
VCL-203ENST00000461383 ZNF330Q9Y3S2 320 aaPredicted RBP5.85□□□□□ -1.47
VCL-203ENST00000461383 USP17L8P0C7I0 530 aa5.84□□□□□ -1.47
VCL-203ENST00000461383 HRCP23327 699 aa5.84□□□□□ -1.47
VCL-203ENST00000461383 ABL2P42684 1182 aa5.84□□□□□ -1.47
VCL-203ENST00000461383 MMP16P51512 607 aa5.84□□□□□ -1.47
VCL-203ENST00000461383 Q3C1V9 767 aa5.84□□□□□ -1.47
VCL-203ENST00000461383 RTL5Q5HYW3 569 aaPredicted RBP5.84□□□□□ -1.47
VCL-203ENST00000461383 RNF19BQ6ZMZ0 732 aa5.84□□□□□ -1.47
VCL-203ENST00000461383 MTMR14Q8NCE2 650 aa5.84□□□□□ -1.47
VCL-203ENST00000461383 HELBQ8NG08 1087 aaPredicted RBP5.84□□□□□ -1.47
VCL-203ENST00000461383 PRDM9Q9NQV7 894 aa5.84□□□□□ -1.47
VCL-203ENST00000461383 C6orf229H3BNL8 230 aa5.83□□□□□ -1.48
VCL-203ENST00000461383 CD2BP2O95400 341 aaKnown RBP5.83□□□□□ -1.48
VCL-203ENST00000461383 GUCA2AQ02747 115 aa5.83□□□□□ -1.48
VCL-203ENST00000461383 MTMR2Q13614 643 aa5.83□□□□□ -1.48
VCL-203ENST00000461383 ZNF775Q96BV0 537 aaPredicted RBP5.83□□□□□ -1.48
VCL-203ENST00000461383 AAASQ9NRG9 546 aa5.83□□□□□ -1.48
VCL-203ENST00000461383 SERPINA10Q9UK55 444 aa5.83□□□□□ -1.48
VCL-203ENST00000461383 SMCPP49901 116 aaPredicted RBP5.82□□□□□ -1.48
VCL-203ENST00000461383 FNBP4Q8N3X1 1017 aaPredicted RBP5.82□□□□□ -1.48
VCL-203ENST00000461383 SOCS7O14512 581 aa5.81□□□□□ -1.48
VCL-203ENST00000461383 DXOO77932 396 aaKnown RBP5.81□□□□□ -1.48
VCL-203ENST00000461383 CTC1Q2NKJ3 1217 aa5.81□□□□□ -1.48
VCL-203ENST00000461383 HLA-CQ95604 372 aa5.81□□□□□ -1.48
VCL-203ENST00000461383 TBC1D2BQ9UPU7 963 aa5.81□□□□□ -1.48
VCL-203ENST00000461383 WNT7AO00755 349 aa5.8□□□□□ -1.48
VCL-203ENST00000461383 PCDHGC3Q9UN70 934 aa5.8□□□□□ -1.48
VCL-203ENST00000461383 NDUFB9Q9Y6M9 179 aa5.8□□□□□ -1.48
VCL-203ENST00000461383 POTECB2RU33 542 aa5.79□□□□□ -1.48
VCL-203ENST00000461383 ST8SIA5O15466 376 aa5.79□□□□□ -1.48
VCL-203ENST00000461383 CTDSPL2Q05D32 466 aa5.79□□□□□ -1.48
VCL-203ENST00000461383 FOXC1Q12948 553 aa5.79□□□□□ -1.48
VCL-203ENST00000461383 LCE2AQ5TA79 106 aaPredicted RBP5.79□□□□□ -1.48
VCL-203ENST00000461383 CALR3Q96L12 384 aaKnown RBP5.79□□□□□ -1.48
VCL-203ENST00000461383 USB1Q9BQ65 265 aaKnown RBP5.79□□□□□ -1.48
VCL-203ENST00000461383 ZBTB24O43167 697 aaPredicted RBP5.78□□□□□ -1.48
VCL-203ENST00000461383 TRIM32Q13049 653 aa5.78□□□□□ -1.48
VCL-203ENST00000461383 CYP4X1Q8N118 509 aa5.78□□□□□ -1.48
VCL-203ENST00000461383 PDIA4P13667 645 aaKnown RBP5.77□□□□□ -1.49
VCL-203ENST00000461383 PRR7Q8TB68 274 aa5.77□□□□□ -1.49
VCL-203ENST00000461383 CFAP99D6REC4 459 aa5.76□□□□□ -1.49
VCL-203ENST00000461383 WASHC4Q2M389 1173 aa5.76□□□□□ -1.49
VCL-203ENST00000461383 SYMPKQ92797 1274 aaKnown RBP5.76□□□□□ -1.49
VCL-203ENST00000461383 AXIN1O15169 862 aa5.75□□□□□ -1.49
VCL-203ENST00000461383 SMPD1P17405 629 aa5.75□□□□□ -1.49
VCL-203ENST00000461383 WNT7BP56706 349 aa5.75□□□□□ -1.49
VCL-203ENST00000461383 RETREG3Q86VR2 466 aa5.75□□□□□ -1.49
VCL-203ENST00000461383 PNMA1Q8ND90 353 aa5.75□□□□□ -1.49
VCL-203ENST00000461383 SNIP1Q8TAD8 396 aaKnown RBP5.75□□□□□ -1.49
VCL-203ENST00000461383 LRRN4Q8WUT4 740 aa5.75□□□□□ -1.49
VCL-203ENST00000461383 GLMNQ92990 594 aa5.75□□□□□ -1.49
VCL-203ENST00000461383 GJD4Q96KN9 370 aaPredicted RBP5.75□□□□□ -1.49
VCL-203ENST00000461383 HMX1Q9NP08 348 aaPredicted RBP5.75□□□□□ -1.49
VCL-203ENST00000461383 POM121CA8CG34 1229 aa5.74□□□□□ -1.49
VCL-203ENST00000461383 JUNDP17535 347 aa5.74□□□□□ -1.49
VCL-203ENST00000461383 PODXL2Q9NZ53 605 aa5.74□□□□□ -1.49
VCL-203ENST00000461383 VAC14Q08AM6 782 aa5.73□□□□□ -1.49
VCL-203ENST00000461383 TREML4Q6UXN2 200 aa5.73□□□□□ -1.49
VCL-203ENST00000461383 MRGPRX2Q96LB1 330 aa5.73□□□□□ -1.49
VCL-203ENST00000461383 DACH1Q9UI36 760 aa5.73□□□□□ -1.49
VCL-203ENST00000461383 TTC24A2A3L6 582 aaPredicted RBP5.72□□□□□ -1.49
VCL-203ENST00000461383 HDGFL1Q5TGJ6 251 aa5.72□□□□□ -1.49
VCL-203ENST00000461383 TRIM34Q9BYJ4 488 aa5.72□□□□□ -1.49
VCL-203ENST00000461383 GMPR2Q9P2T1 348 aaKnown RBP5.72□□□□□ -1.49
VCL-203ENST00000461383 ACIN1Q9UKV3 1341 aaKnown RBP5.72□□□□□ -1.49
VCL-203ENST00000461383 ZBTB7CA1YPR0 619 aa5.71□□□□□ -1.5
VCL-203ENST00000461383 SKOR1P84550 965 aa5.71□□□□□ -1.5
VCL-203ENST00000461383 IRF5Q13568 498 aa5.71□□□□□ -1.5
VCL-203ENST00000461383 NR6A1Q15406 480 aa5.71□□□□□ -1.5
VCL-203ENST00000461383 PER1O15534 1290 aaPredicted RBP5.7□□□□□ -1.5
VCL-203ENST00000461383 TRIM26Q12899 539 aaPredicted RBP5.7□□□□□ -1.5
VCL-203ENST00000461383 SEMA3FQ13275 785 aa5.7□□□□□ -1.5
VCL-203ENST00000461383 DESI1Q6ICB0 168 aa5.7□□□□□ -1.5
VCL-203ENST00000461383 EPS8L1Q8TE68 723 aa5.7□□□□□ -1.5
VCL-203ENST00000461383 J3QL48 77 aa5.69□□□□□ -1.5
VCL-203ENST00000461383 PPP1R15AO75807 674 aaPredicted RBP5.69□□□□□ -1.5
VCL-203ENST00000461383 RC3H1Q5TC82 1133 aaKnown RBP5.69□□□□□ -1.5
VCL-203ENST00000461383 NUDT12Q9BQG2 462 aa5.69□□□□□ -1.5
VCL-203ENST00000461383 ATP13A2Q9NQ11 1180 aa5.69□□□□□ -1.5
VCL-203ENST00000461383 C11orf95C9JLR9 678 aaPredicted RBP5.68□□□□□ -1.5
VCL-203ENST00000461383 SIAH2O43255 324 aa5.68□□□□□ -1.5
VCL-203ENST00000461383 RFX1P22670 979 aa5.68□□□□□ -1.5
VCL-203ENST00000461383 SOX11P35716 441 aa5.68□□□□□ -1.5
VCL-203ENST00000461383 EIF4G2P78344 907 aaKnown RBP eCLIP5.68□□□□□ -1.56e-6■■■■□ 25.1
VCL-203ENST00000461383 NFX1Q12986 1120 aaKnown RBP5.68□□□□□ -1.5
VCL-203ENST00000461383 PTPRNQ16849 979 aa5.68□□□□□ -1.5
VCL-203ENST00000461383 LYPD8Q6UX82 237 aa5.68□□□□□ -1.5
VCL-203ENST00000461383 TRIM47Q96LD4 638 aa5.68□□□□□ -1.5
VCL-203ENST00000461383 WIPF1O43516 503 aa5.67□□□□□ -1.5
VCL-203ENST00000461383 CTHP32929 405 aa5.67□□□□□ -1.5
VCL-203ENST00000461383 PDE4CQ08493 712 aa5.67□□□□□ -1.5
VCL-203ENST00000461383 CCDC24Q8N4L8 307 aa5.67□□□□□ -1.5
VCL-203ENST00000461383 HPS1Q92902 700 aa5.67□□□□□ -1.5
VCL-203ENST00000461383 KIFC2Q96AC6 838 aa5.67□□□□□ -1.5
VCL-203ENST00000461383 SENP2Q9HC62 589 aa5.67□□□□□ -1.5
VCL-203ENST00000461383 CCNYL3P0C7X3 344 aa5.66□□□□□ -1.5
VCL-203ENST00000461383 PTCRAQ6ISU1 281 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms