RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 C3orf80F5H4A9 247 aa10.68□□□□□ -0.7
NUP50-212ENST00000461194 LSM11P83369 360 aaKnown RBP eCLIP10.68□□□□□ -0.7
NUP50-212ENST00000461194 NUDT18Q6ZVK8 323 aa10.68□□□□□ -0.7
NUP50-212ENST00000461194 SLC4A5Q9BY07 1137 aa10.68□□□□□ -0.7
NUP50-212ENST00000461194 VPS9D1Q9Y2B5 631 aa10.68□□□□□ -0.7
NUP50-212ENST00000461194 RIMS1Q86UR5 1692 aaKnown RBP10.68□□□□□ -0.7
NUP50-212ENST00000461194 ONECUT3O60422 494 aaPredicted RBP10.67□□□□□ -0.7
NUP50-212ENST00000461194 TATDN2Q93075 761 aa10.67□□□□□ -0.7
NUP50-212ENST00000461194 ESF1Q9H501 851 aaKnown RBP10.67□□□□□ -0.7
NUP50-212ENST00000461194 PNMA3Q9UL41 463 aa10.67□□□□□ -0.7
NUP50-212ENST00000461194 PLXNC1O60486 1568 aa10.67□□□□□ -0.7
NUP50-212ENST00000461194 SMAPO00193 183 aa10.66□□□□□ -0.7
NUP50-212ENST00000461194 CEBPAP49715 358 aaPredicted RBP10.66□□□□□ -0.7
NUP50-212ENST00000461194 RBM46Q8TBY0 533 aaKnown RBP10.66□□□□□ -0.7
NUP50-212ENST00000461194 FGD6Q6ZV73 1430 aa10.66□□□□□ -0.7
NUP50-212ENST00000461194 CNTLNQ9NXG0 1405 aa10.66□□□□□ -0.7
NUP50-212ENST00000461194 FER1L4A9Z1Z3 1794 aa10.65□□□□□ -0.7
NUP50-212ENST00000461194 NBPF26B4DH59 902 aa10.65□□□□□ -0.7
NUP50-212ENST00000461194 GGT6Q6P531 493 aa10.65□□□□□ -0.7
NUP50-212ENST00000461194 METTL3Q86U44 580 aaKnown RBP10.65□□□□□ -0.7
NUP50-212ENST00000461194 PHOX2BQ99453 314 aa10.65□□□□□ -0.7
NUP50-212ENST00000461194 RABGEF1Q9UJ41 708 aa10.65□□□□□ -0.7
NUP50-212ENST00000461194 TCOF1Q13428 1488 aaKnown RBP10.64□□□□□ -0.71
NUP50-212ENST00000461194 PDE4DQ08499 809 aa10.64□□□□□ -0.71
NUP50-212ENST00000461194 PXYLP1Q8TE99 480 aa10.64□□□□□ -0.71
NUP50-212ENST00000461194 NLRP7Q8WX94 980 aa10.64□□□□□ -0.71
NUP50-212ENST00000461194 EYA1Q99502 592 aa10.64□□□□□ -0.71
NUP50-212ENST00000461194 ABCC5O15440 1437 aa10.64□□□□□ -0.71
NUP50-212ENST00000461194 TK2O00142 265 aa10.63□□□□□ -0.71
NUP50-212ENST00000461194 KIF3BO15066 747 aa10.63□□□□□ -0.71
NUP50-212ENST00000461194 NEUROD2Q15784 382 aa10.63□□□□□ -0.71
NUP50-212ENST00000461194 CDAN1Q8IWY9 1227 aa10.63□□□□□ -0.71
NUP50-212ENST00000461194 MAST1Q9Y2H9 1570 aa10.63□□□□□ -0.71
NUP50-212ENST00000461194 ZMYM3Q14202 1370 aa10.63□□□□□ -0.71
NUP50-212ENST00000461194 ADGBQ8N7X0 1667 aa10.63□□□□□ -0.71
NUP50-212ENST00000461194 PTPN23Q9H3S7 1636 aa10.62□□□□□ -0.71
NUP50-212ENST00000461194 LMTK3Q96Q04 1460 aa10.62□□□□□ -0.71
NUP50-212ENST00000461194 ADGRD1Q6QNK2 874 aa10.62□□□□□ -0.71
NUP50-212ENST00000461194 SEPT9Q9UHD8 586 aaPredicted RBP10.62□□□□□ -0.71
NUP50-212ENST00000461194 SHANK2Q9UPX8 1470 aa10.61□□□□□ -0.71
NUP50-212ENST00000461194 DAPK1P53355 1430 aa10.61□□□□□ -0.71
NUP50-212ENST00000461194 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
NUP50-212ENST00000461194 RCCD1A6NED2 376 aa10.6□□□□□ -0.71
NUP50-212ENST00000461194 MDM2Q00987 491 aaPredicted RBP10.6□□□□□ -0.71
NUP50-212ENST00000461194 TTLL12Q14166 644 aaPredicted RBP10.6□□□□□ -0.71
NUP50-212ENST00000461194 STAC3Q96MF2 364 aa10.6□□□□□ -0.71
NUP50-212ENST00000461194 KRTAP3-3Q9BYR6 98 aa10.6□□□□□ -0.71
NUP50-212ENST00000461194 KRTAP3-2Q9BYR7 98 aa10.6□□□□□ -0.71
NUP50-212ENST00000461194 GPBP1L1Q9HC44 474 aaPredicted RBP10.6□□□□□ -0.71
NUP50-212ENST00000461194 HSPA2P54652 639 aa10.59□□□□□ -0.71
NUP50-212ENST00000461194 FAM50AQ14320 339 aaKnown RBP10.59□□□□□ -0.71
NUP50-212ENST00000461194 AMHR2Q16671 573 aa10.59□□□□□ -0.71
NUP50-212ENST00000461194 NPATQ14207 1427 aa10.58□□□□□ -0.72
NUP50-212ENST00000461194 KIF15Q9NS87 1388 aa10.58□□□□□ -0.72
NUP50-212ENST00000461194 RRP7BPQ9NSQ0 103 aa10.58□□□□□ -0.72
NUP50-212ENST00000461194 DNMT1P26358 1616 aaKnown RBP10.58□□□□□ -0.72
NUP50-212ENST00000461194 UHRF1BP1Q6BDS2 1440 aa10.58□□□□□ -0.72
NUP50-212ENST00000461194 WASHC2CQ9Y4E1 1318 aa10.58□□□□□ -0.72
NUP50-212ENST00000461194 ANKRD30AQ9BXX3 1397 aa10.57□□□□□ -0.72
NUP50-212ENST00000461194 BHMG1C9JSJ3 638 aaPredicted RBP10.57□□□□□ -0.72
NUP50-212ENST00000461194 PPARGC1BQ86YN6 1023 aaKnown RBP10.57□□□□□ -0.72
NUP50-212ENST00000461194 MRPL50Q8N5N7 158 aaKnown RBP10.57□□□□□ -0.72
NUP50-212ENST00000461194 NBPF3Q9H094 633 aa10.57□□□□□ -0.72
NUP50-212ENST00000461194 CHIC2Q9UKJ5 165 aa10.57□□□□□ -0.72
NUP50-212ENST00000461194 DUOX2Q9NRD8 1548 aa10.57□□□□□ -0.72
NUP50-212ENST00000461194 C3P01024 1663 aa10.57□□□□□ -0.72
NUP50-212ENST00000461194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.56□□□□□ -0.72
NUP50-212ENST00000461194 CLCN1P35523 988 aa10.56□□□□□ -0.72
NUP50-212ENST00000461194 PARP9Q8IXQ6 854 aa10.56□□□□□ -0.72
NUP50-212ENST00000461194 FAM135AQ9P2D6 1515 aa10.56□□□□□ -0.72
NUP50-212ENST00000461194 PTPRKQ15262 1439 aa10.56□□□□□ -0.72
NUP50-212ENST00000461194 NCOA1Q15788 1441 aa10.56□□□□□ -0.72
NUP50-212ENST00000461194 MROH2AA6NES4 1674 aa10.56□□□□□ -0.72
NUP50-212ENST00000461194 HRO43593 1189 aa10.55□□□□□ -0.72
NUP50-212ENST00000461194 DNAJB2P25686 324 aa10.55□□□□□ -0.72
NUP50-212ENST00000461194 FAM98CQ17RN3 349 aaKnown RBP10.55□□□□□ -0.72
NUP50-212ENST00000461194 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
NUP50-212ENST00000461194 KDM4CQ9H3R0 1056 aa10.55□□□□□ -0.72
NUP50-212ENST00000461194 ERBINQ96RT1 1412 aa10.55□□□□□ -0.72
NUP50-212ENST00000461194 SETD1BQ9UPS6 1966 aaKnown RBP10.55□□□□□ -0.72
NUP50-212ENST00000461194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.54□□□□□ -0.72
NUP50-212ENST00000461194 KDM5DQ9BY66 1539 aa10.54□□□□□ -0.72
NUP50-212ENST00000461194 CLTCQ00610 1675 aaKnown RBP10.54□□□□□ -0.72
NUP50-212ENST00000461194 ADGRL2O95490 1459 aa10.54□□□□□ -0.72
NUP50-212ENST00000461194 CROCC2H7BZ55 1655 aa10.53□□□□□ -0.72
NUP50-212ENST00000461194 PREX1Q8TCU6 1659 aa10.53□□□□□ -0.72
NUP50-212ENST00000461194 HDGFP51858 240 aaKnown RBP10.53□□□□□ -0.72
NUP50-212ENST00000461194 LAPTM4BQ86VI4 370 aa10.53□□□□□ -0.72
NUP50-212ENST00000461194 GPCPD1Q9NPB8 672 aa10.53□□□□□ -0.72
NUP50-212ENST00000461194 EIF2AK4Q9P2K8 1649 aaKnown RBP10.53□□□□□ -0.72
NUP50-212ENST00000461194 RNF17Q9BXT8 1623 aaKnown RBP10.52□□□□□ -0.73
NUP50-212ENST00000461194 GOLGA8CPA6NN73 597 aa10.52□□□□□ -0.73
NUP50-212ENST00000461194 FBXO31Q5XUX0 539 aaPredicted RBP10.52□□□□□ -0.73
NUP50-212ENST00000461194 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
NUP50-212ENST00000461194 TMUB1Q9BVT8 246 aa10.52□□□□□ -0.73
NUP50-212ENST00000461194 TMEM134Q9H6X4 195 aa10.52□□□□□ -0.73
NUP50-212ENST00000461194 PLSCR2Q9NRY7 297 aa10.52□□□□□ -0.73
NUP50-212ENST00000461194 DAXXQ9UER7 740 aaPredicted RBP10.52□□□□□ -0.73
NUP50-212ENST00000461194 PZPP20742 1482 aa10.52□□□□□ -0.73
NUP50-212ENST00000461194 ABCC3O15438 1527 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms