RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 HMX1Q9NP08 348 aaPredicted RBP6.33□□□□□ -1.4
CCDC93-204ENST00000460781 MAP10Q9P2G4 905 aa6.33□□□□□ -1.4
CCDC93-204ENST00000460781 TRAK2O60296 914 aa6.32□□□□□ -1.4
CCDC93-204ENST00000460781 EIF4G2P78344 907 aaKnown RBP eCLIP6.32□□□□□ -1.4
CCDC93-204ENST00000460781 EVA1BQ9NVM1 165 aa6.32□□□□□ -1.4
CCDC93-204ENST00000460781 SEMA3FQ13275 785 aa6.31□□□□□ -1.4
CCDC93-204ENST00000460781 ZBTB33Q86T24 672 aa6.31□□□□□ -1.4
CCDC93-204ENST00000460781 CALR3Q96L12 384 aaKnown RBP6.31□□□□□ -1.4
CCDC93-204ENST00000460781 UNC93B1Q9H1C4 597 aa6.31□□□□□ -1.4
CCDC93-204ENST00000460781 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.31□□□□□ -1.4
CCDC93-204ENST00000460781 SOX11P35716 441 aa6.3□□□□□ -1.4
CCDC93-204ENST00000460781 ARID3AQ99856 593 aa6.3□□□□□ -1.4
CCDC93-204ENST00000460781 ARHGAP9Q9BRR9 750 aa6.3□□□□□ -1.4
CCDC93-204ENST00000460781 MAGEB6P1A0A0J9YX57 407 aa6.29□□□□□ -1.4
CCDC93-204ENST00000460781 ZBBXA8MT70 800 aa6.29□□□□□ -1.4
CCDC93-204ENST00000460781 CD2BP2O95400 341 aaKnown RBP6.29□□□□□ -1.4
CCDC93-204ENST00000460781 F12P00748 615 aaPredicted RBP6.29□□□□□ -1.4
CCDC93-204ENST00000460781 BPHLQ86WA6 291 aaPredicted RBP6.29□□□□□ -1.4
CCDC93-204ENST00000460781 ANKLE1Q8NAG6 615 aa6.29□□□□□ -1.4
CCDC93-204ENST00000460781 GJD4Q96KN9 370 aaPredicted RBP6.29□□□□□ -1.4
CCDC93-204ENST00000460781 TRIM34Q9BYJ4 488 aa6.29□□□□□ -1.4
CCDC93-204ENST00000460781 PLA2G2EQ9NZK7 142 aa6.29□□□□□ -1.4
CCDC93-204ENST00000460781 ZNF777Q9ULD5 760 aaPredicted RBP6.29□□□□□ -1.4
CCDC93-204ENST00000460781 VAC14Q08AM6 782 aa6.28□□□□□ -1.4
CCDC93-204ENST00000460781 NR1H3Q13133 447 aa6.28□□□□□ -1.4
CCDC93-204ENST00000460781 LINC01559Q495D7 138 aa6.28□□□□□ -1.4
CCDC93-204ENST00000460781 TRIM52Q96A61 297 aa6.28□□□□□ -1.4
CCDC93-204ENST00000460781 CARD14Q9BXL6 1004 aa6.28□□□□□ -1.4
CCDC93-204ENST00000460781 ARID3CA6NKF2 412 aa6.27□□□□□ -1.41
CCDC93-204ENST00000460781 RNF223E7ERA6 249 aa6.27□□□□□ -1.41
CCDC93-204ENST00000460781 PPEF1O14829 653 aaPredicted RBP6.27□□□□□ -1.41
CCDC93-204ENST00000460781 MCCD1P59942 119 aaPredicted RBP6.27□□□□□ -1.41
CCDC93-204ENST00000460781 PPP1R18Q6NYC8 613 aa6.27□□□□□ -1.41
CCDC93-204ENST00000460781 PDXDC2PQ6P474 469 aa6.27□□□□□ -1.41
CCDC93-204ENST00000460781 DZIP3Q86Y13 1208 aaKnown RBP6.27□□□□□ -1.41
CCDC93-204ENST00000460781 EPS8L1Q8TE68 723 aa6.27□□□□□ -1.41
CCDC93-204ENST00000460781 SLC10A4Q96EP9 437 aa6.27□□□□□ -1.41
CCDC93-204ENST00000460781 SERPINA10Q9UK55 444 aa6.27□□□□□ -1.41
CCDC93-204ENST00000460781 GPSM3Q9Y4H4 160 aa6.27□□□□□ -1.41
CCDC93-204ENST00000460781 PCDHB9Q9Y5E1 797 aa6.27□□□□□ -1.41
CCDC93-204ENST00000460781 BAP1Q92560 729 aa6.26□□□□□ -1.41
CCDC93-204ENST00000460781 ZNF511Q8NB15 262 aa6.25□□□□□ -1.41
CCDC93-204ENST00000460781 ESF1Q9H501 851 aaKnown RBP6.25□□□□□ -1.41
CCDC93-204ENST00000460781 RPIAP49247 311 aa6.24□□□□□ -1.41
CCDC93-204ENST00000460781 TRIM32Q13049 653 aa6.24□□□□□ -1.41
CCDC93-204ENST00000460781 SLFNL1Q499Z3 407 aa6.24□□□□□ -1.41
CCDC93-204ENST00000460781 EHBP1Q8NDI1 1231 aa6.24□□□□□ -1.41
CCDC93-204ENST00000460781 FAM174AQ8TBP5 190 aa6.24□□□□□ -1.41
CCDC93-204ENST00000460781 GLMNQ92990 594 aa6.24□□□□□ -1.41
CCDC93-204ENST00000460781 CDV3Q9UKY7 258 aaKnown RBP6.24□□□□□ -1.41
CCDC93-204ENST00000460781 FBXO45P0C2W1 286 aa6.23□□□□□ -1.41
CCDC93-204ENST00000460781 SLC19A1P41440 591 aa6.23□□□□□ -1.41
CCDC93-204ENST00000460781 WNT7BP56706 349 aa6.23□□□□□ -1.41
CCDC93-204ENST00000460781 NBPF20Q3BBV1 942 aa6.23□□□□□ -1.41
CCDC93-204ENST00000460781 IFFO2Q5TF58 517 aa6.23□□□□□ -1.41
CCDC93-204ENST00000460781 HDGFL1Q5TGJ6 251 aa6.23□□□□□ -1.41
CCDC93-204ENST00000460781 PLSCR2Q9NRY7 297 aa6.23□□□□□ -1.41
CCDC93-204ENST00000460781 IRF5Q13568 498 aa6.22□□□□□ -1.41
CCDC93-204ENST00000460781 PTCRAQ6ISU1 281 aaPredicted RBP6.22□□□□□ -1.41
CCDC93-204ENST00000460781 FNBP4Q8N3X1 1017 aaPredicted RBP6.22□□□□□ -1.41
CCDC93-204ENST00000460781 ADAM32Q8TC27 787 aa6.22□□□□□ -1.41
CCDC93-204ENST00000460781 POM121CA8CG34 1229 aa6.21□□□□□ -1.42
CCDC93-204ENST00000460781 ARID5BQ14865 1188 aa6.21□□□□□ -1.42
CCDC93-204ENST00000460781 RNF20Q5VTR2 975 aa6.21□□□□□ -1.42
CCDC93-204ENST00000460781 CCDC82Q8N4S0 544 aa6.21□□□□□ -1.42
CCDC93-204ENST00000460781 A0A0G2JS52 829 aa6.2□□□□□ -1.42
CCDC93-204ENST00000460781 VARSP26640 1264 aaKnown RBP6.2□□□□□ -1.42
CCDC93-204ENST00000460781 RNF135Q8IUD6 432 aa6.2□□□□□ -1.42
CCDC93-204ENST00000460781 VASH1Q7L8A9 365 aaPredicted RBP6.19□□□□□ -1.42
CCDC93-204ENST00000460781 SH3BP5LQ7L8J4 393 aa6.19□□□□□ -1.42
CCDC93-204ENST00000460781 FOXJ1Q92949 421 aa6.19□□□□□ -1.42
CCDC93-204ENST00000460781 RAB15P59190 212 aa6.18□□□□□ -1.42
CCDC93-204ENST00000460781 SH3BP2P78314 561 aa6.18□□□□□ -1.42
CCDC93-204ENST00000460781 FOXC1Q12948 553 aa6.18□□□□□ -1.42
CCDC93-204ENST00000460781 RC3H1Q5TC82 1133 aaKnown RBP6.18□□□□□ -1.42
CCDC93-204ENST00000460781 ZNF697Q5TEC3 545 aa6.18□□□□□ -1.42
CCDC93-204ENST00000460781 CCDC125Q86Z20 511 aa6.18□□□□□ -1.42
CCDC93-204ENST00000460781 PRKD2Q9BZL6 878 aa6.18□□□□□ -1.42
CCDC93-204ENST00000460781 RBM19Q9Y4C8 960 aaKnown RBP6.18□□□□□ -1.42
CCDC93-204ENST00000460781 WASF2Q9Y6W5 498 aa6.18□□□□□ -1.42
CCDC93-204ENST00000460781 ACIN1Q9UKV3 1341 aaKnown RBP6.18□□□□□ -1.42
CCDC93-204ENST00000460781 SKIP12755 728 aa6.17□□□□□ -1.42
CCDC93-204ENST00000460781 ERFEQ4G0M1 354 aa6.17□□□□□ -1.42
CCDC93-204ENST00000460781 TTC24A2A3L6 582 aaPredicted RBP6.16□□□□□ -1.42
CCDC93-204ENST00000460781 DHX9Q08211 1270 aaKnown RBP6.16□□□□□ -1.42
CCDC93-204ENST00000460781 PLA2G2CQ5R387 149 aa6.16□□□□□ -1.42
CCDC93-204ENST00000460781 SIRT1Q96EB6 747 aa6.16□□□□□ -1.42
CCDC93-204ENST00000460781 V9GY48 417 aaPredicted RBP6.16□□□□□ -1.42
CCDC93-204ENST00000460781 MYCP01106 439 aaPredicted RBP6.15□□□□□ -1.42
CCDC93-204ENST00000460781 RFX1P22670 979 aa6.15□□□□□ -1.42
CCDC93-204ENST00000460781 EML3Q32P44 896 aa6.15□□□□□ -1.42
CCDC93-204ENST00000460781 LIAT1Q6ZQX7 453 aa6.15□□□□□ -1.42
CCDC93-204ENST00000460781 CYP4X1Q8N118 509 aa6.15□□□□□ -1.42
CCDC93-204ENST00000460781 ALG2Q9H553 416 aa6.15□□□□□ -1.42
CCDC93-204ENST00000460781 DOLKQ9UPQ8 538 aa6.15□□□□□ -1.42
CCDC93-204ENST00000460781 WNT7AO00755 349 aa6.14□□□□□ -1.43
CCDC93-204ENST00000460781 LMOD1P29536 600 aaPredicted RBP6.14□□□□□ -1.43
CCDC93-204ENST00000460781 PDE4CQ08493 712 aa6.14□□□□□ -1.43
CCDC93-204ENST00000460781 SPRYD7Q5W111 196 aa6.14□□□□□ -1.43
CCDC93-204ENST00000460781 SH3RF1Q7Z6J0 888 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms