RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 TREML4Q6UXN2 200 aa6.8□□□□□ -1.32
SYPL1-203ENST00000460770 MPNDQ8N594 471 aa6.8□□□□□ -1.32
SYPL1-203ENST00000460770 ARMC2Q8NEN0 867 aa6.8□□□□□ -1.32
SYPL1-203ENST00000460770 HELBQ8NG08 1087 aaPredicted RBP6.8□□□□□ -1.32
SYPL1-203ENST00000460770 BAP1Q92560 729 aa6.8□□□□□ -1.32
SYPL1-203ENST00000460770 TRIM47Q96LD4 638 aa6.8□□□□□ -1.32
SYPL1-203ENST00000460770 LINC01559Q495D7 138 aa6.79□□□□□ -1.32
SYPL1-203ENST00000460770 FAM174AQ8TBP5 190 aa6.79□□□□□ -1.32
SYPL1-203ENST00000460770 CAPN5O15484 640 aaPredicted RBP6.78□□□□□ -1.32
SYPL1-203ENST00000460770 WFS1O76024 890 aa6.78□□□□□ -1.32
SYPL1-203ENST00000460770 PCDHB15Q9Y5E8 787 aa6.78□□□□□ -1.32
SYPL1-203ENST00000460770 CFAP99D6REC4 459 aa6.77□□□□□ -1.33
SYPL1-203ENST00000460770 AGERQ15109 404 aa6.77□□□□□ -1.33
SYPL1-203ENST00000460770 CSPP1Q1MSJ5 1256 aa6.77□□□□□ -1.33
SYPL1-203ENST00000460770 MYSM1Q5VVJ2 828 aa6.77□□□□□ -1.33
SYPL1-203ENST00000460770 TSC1Q92574 1164 aa6.77□□□□□ -1.33
SYPL1-203ENST00000460770 SLC24A3Q9HC58 644 aa6.77□□□□□ -1.33
SYPL1-203ENST00000460770 NBPF14Q5TI25 921 aa6.76□□□□□ -1.33
SYPL1-203ENST00000460770 BPHLQ86WA6 291 aaPredicted RBP6.76□□□□□ -1.33
SYPL1-203ENST00000460770 CLK2P49760 499 aaKnown RBP6.75□□□□□ -1.33
SYPL1-203ENST00000460770 CABLES1Q8TDN4 633 aa6.75□□□□□ -1.33
SYPL1-203ENST00000460770 LILRB3O75022 631 aa6.74□□□□□ -1.33
SYPL1-203ENST00000460770 F12P00748 615 aaPredicted RBP6.74□□□□□ -1.33
SYPL1-203ENST00000460770 NNTQ13423 1086 aa6.74□□□□□ -1.33
SYPL1-203ENST00000460770 SCARF1Q14162 830 aa6.74□□□□□ -1.33
SYPL1-203ENST00000460770 SLC16A10Q8TF71 515 aa6.74□□□□□ -1.33
SYPL1-203ENST00000460770 BCANQ96GW7 911 aa6.74□□□□□ -1.33
SYPL1-203ENST00000460770 TLL2Q9Y6L7 1015 aa6.74□□□□□ -1.33
SYPL1-203ENST00000460770 ADH1CP00326 375 aa6.73□□□□□ -1.33
SYPL1-203ENST00000460770 SNRPBP14678 240 aaKnown RBP6.73□□□□□ -1.33
SYPL1-203ENST00000460770 MAP10Q9P2G4 905 aa6.73□□□□□ -1.33
SYPL1-203ENST00000460770 LIMD1Q9UGP4 676 aa6.73□□□□□ -1.33
SYPL1-203ENST00000460770 TERTO14746 1132 aaKnown RBP6.72□□□□□ -1.33
SYPL1-203ENST00000460770 NR5A1Q13285 461 aa6.72□□□□□ -1.33
SYPL1-203ENST00000460770 ARID5BQ14865 1188 aa6.72□□□□□ -1.33
SYPL1-203ENST00000460770 GPKOWQ92917 476 aaPredicted RBP eCLIP6.72□□□□□ -1.33
SYPL1-203ENST00000460770 DDRGK1Q96HY6 314 aa6.72□□□□□ -1.33
SYPL1-203ENST00000460770 ATP1B4Q9UN42 357 aaPredicted RBP6.72□□□□□ -1.33
SYPL1-203ENST00000460770 WDR4P57081 412 aaKnown RBP6.71□□□□□ -1.34
SYPL1-203ENST00000460770 INSM1Q01101 510 aaPredicted RBP6.71□□□□□ -1.34
SYPL1-203ENST00000460770 QPCTQ16769 361 aa6.71□□□□□ -1.34
SYPL1-203ENST00000460770 NPAS3Q8IXF0 933 aa6.71□□□□□ -1.34
SYPL1-203ENST00000460770 CDK15Q96Q40 435 aa6.71□□□□□ -1.34
SYPL1-203ENST00000460770 UPP2O95045 317 aa6.7□□□□□ -1.34
SYPL1-203ENST00000460770 PNMA1Q8ND90 353 aa6.7□□□□□ -1.34
SYPL1-203ENST00000460770 POLR3EQ9NVU0 708 aa6.7□□□□□ -1.34
SYPL1-203ENST00000460770 PER1O15534 1290 aaPredicted RBP6.69□□□□□ -1.34
SYPL1-203ENST00000460770 BMP1P13497 986 aa6.69□□□□□ -1.34
SYPL1-203ENST00000460770 NFX1Q12986 1120 aaKnown RBP6.69□□□□□ -1.34
SYPL1-203ENST00000460770 FOXJ1Q92949 421 aa6.69□□□□□ -1.34
SYPL1-203ENST00000460770 NXF1Q9UBU9 619 aaKnown RBP6.69□□□□□ -1.34
SYPL1-203ENST00000460770 WIPF1O43516 503 aa6.68□□□□□ -1.34
SYPL1-203ENST00000460770 SKIV2LQ15477 1246 aaKnown RBP6.68□□□□□ -1.34
SYPL1-203ENST00000460770 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
SYPL1-203ENST00000460770 MRPL14Q6P1L8 145 aaKnown RBP6.68□□□□□ -1.34
SYPL1-203ENST00000460770 TIMP2P16035 220 aa6.67□□□□□ -1.34
SYPL1-203ENST00000460770 SH3D19Q5HYK7 790 aa6.67□□□□□ -1.34
SYPL1-203ENST00000460770 RTL5Q5HYW3 569 aaPredicted RBP6.67□□□□□ -1.34
SYPL1-203ENST00000460770 TRIM46Q7Z4K8 759 aa6.67□□□□□ -1.34
SYPL1-203ENST00000460770 STK17AQ9UEE5 414 aa6.67□□□□□ -1.34
SYPL1-203ENST00000460770 MAP4K5Q9Y4K4 846 aa6.67□□□□□ -1.34
SYPL1-203ENST00000460770 MAGEB6P1A0A0J9YX57 407 aa6.66□□□□□ -1.34
SYPL1-203ENST00000460770 VASH1Q7L8A9 365 aaPredicted RBP6.66□□□□□ -1.34
SYPL1-203ENST00000460770 TRMT44Q8IYL2 757 aaKnown RBP6.66□□□□□ -1.34
SYPL1-203ENST00000460770 IRF7Q92985 503 aa6.66□□□□□ -1.34
SYPL1-203ENST00000460770 ZFP42Q96MM3 310 aa6.66□□□□□ -1.34
SYPL1-203ENST00000460770 KDM4CQ9H3R0 1056 aa6.66□□□□□ -1.34
SYPL1-203ENST00000460770 CDV3Q9UKY7 258 aaKnown RBP6.66□□□□□ -1.34
SYPL1-203ENST00000460770 ZC3H4Q9UPT8 1303 aaKnown RBP6.66□□□□□ -1.34
SYPL1-203ENST00000460770 FAM181BA6NEQ2 426 aa6.65□□□□□ -1.34
SYPL1-203ENST00000460770 ZIC2O95409 532 aaPredicted RBP6.65□□□□□ -1.34
SYPL1-203ENST00000460770 TRIM52Q96A61 297 aa6.65□□□□□ -1.34
SYPL1-203ENST00000460770 C1QTNF2Q9BXJ5 285 aa6.65□□□□□ -1.34
SYPL1-203ENST00000460770 EMILIN1Q9Y6C2 1016 aa6.65□□□□□ -1.34
SYPL1-203ENST00000460770 PDXDC2PQ6P474 469 aa6.64□□□□□ -1.35
SYPL1-203ENST00000460770 SH3BP5LQ7L8J4 393 aa6.64□□□□□ -1.35
SYPL1-203ENST00000460770 SH3RF1Q7Z6J0 888 aa6.64□□□□□ -1.35
SYPL1-203ENST00000460770 PURBQ96QR8 312 aaKnown RBP6.64□□□□□ -1.35
SYPL1-203ENST00000460770 MAN1A2O60476 641 aa6.63□□□□□ -1.35
SYPL1-203ENST00000460770 FSHRP23945 695 aa6.63□□□□□ -1.35
SYPL1-203ENST00000460770 GRM5P41594 1212 aa6.63□□□□□ -1.35
SYPL1-203ENST00000460770 C4orf48Q5BLP8 95 aa6.63□□□□□ -1.35
SYPL1-203ENST00000460770 SLC10A4Q96EP9 437 aa6.63□□□□□ -1.35
SYPL1-203ENST00000460770 ARHGAP9Q9BRR9 750 aa6.63□□□□□ -1.35
SYPL1-203ENST00000460770 KLF16Q9BXK1 252 aaPredicted RBP6.63□□□□□ -1.35
SYPL1-203ENST00000460770 CARD14Q9BXL6 1004 aa6.63□□□□□ -1.35
SYPL1-203ENST00000460770 PGPEP1Q9NXJ5 209 aa6.63□□□□□ -1.35
SYPL1-203ENST00000460770 FKBPLQ9UIM3 349 aa6.63□□□□□ -1.35
SYPL1-203ENST00000460770 BMP2P12643 396 aa6.62□□□□□ -1.35
SYPL1-203ENST00000460770 PTK2Q05397 1052 aa6.62□□□□□ -1.35
SYPL1-203ENST00000460770 CTDSPL2Q05D32 466 aa6.62□□□□□ -1.35
SYPL1-203ENST00000460770 DHX9Q08211 1270 aaKnown RBP6.62□□□□□ -1.35
SYPL1-203ENST00000460770 ZBTB33Q86T24 672 aa6.62□□□□□ -1.35
SYPL1-203ENST00000460770 CCDC116Q8IYX3 515 aa6.62□□□□□ -1.35
SYPL1-203ENST00000460770 ITPKCQ96DU7 683 aa6.62□□□□□ -1.35
SYPL1-203ENST00000460770 TSEN34Q9BSV6 310 aaKnown RBP6.62□□□□□ -1.35
SYPL1-203ENST00000460770 GPSM3Q9Y4H4 160 aa6.62□□□□□ -1.35
SYPL1-203ENST00000460770 H3BM21 787 aa6.61□□□□□ -1.35
SYPL1-203ENST00000460770 PPP2R2DQ66LE6 453 aa6.61□□□□□ -1.35
SYPL1-203ENST00000460770 ZFAND3Q9H8U3 227 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms