RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 SULF1Q8IWU6 871 aa9.24□□□□□ -0.93
PTPN12-209ENST00000460731 TRIM47Q96LD4 638 aa9.24□□□□□ -0.93
PTPN12-209ENST00000460731 CLASP1Q7Z460 1538 aa9.24□□□□□ -0.93
PTPN12-209ENST00000460731 INSM1Q01101 510 aaPredicted RBP9.23□□□□□ -0.93
PTPN12-209ENST00000460731 CEP170Q5SW79 1584 aa9.23□□□□□ -0.93
PTPN12-209ENST00000460731 J3QL48 77 aa9.22□□□□□ -0.93
PTPN12-209ENST00000460731 TERTO14746 1132 aaKnown RBP9.22□□□□□ -0.93
PTPN12-209ENST00000460731 MRGPRX2Q96LB1 330 aa9.22□□□□□ -0.93
PTPN12-209ENST00000460731 GOLGA3Q08378 1498 aa9.21□□□□□ -0.94
PTPN12-209ENST00000460731 SENP2Q9HC62 589 aa9.2□□□□□ -0.94
PTPN12-209ENST00000460731 DXOO77932 396 aaKnown RBP9.19□□□□□ -0.94
PTPN12-209ENST00000460731 TNIKQ9UKE5 1360 aa9.19□□□□□ -0.94
PTPN12-209ENST00000460731 SHROOM2Q13796 1616 aa9.19□□□□□ -0.94
PTPN12-209ENST00000460731 Q3C1V9 767 aa9.18□□□□□ -0.94
PTPN12-209ENST00000460731 GRIPAP1Q4V328 841 aa9.18□□□□□ -0.94
PTPN12-209ENST00000460731 HPS1Q92902 700 aa9.18□□□□□ -0.94
PTPN12-209ENST00000460731 UGGT2Q9NYU1 1516 aa9.17□□□□□ -0.94
PTPN12-209ENST00000460731 SMYD5Q6GMV2 418 aa9.17□□□□□ -0.94
PTPN12-209ENST00000460731 REPIN1Q9BWE0 567 aaKnown RBP9.16□□□□□ -0.94
PTPN12-209ENST00000460731 IQGAP2Q13576 1575 aa9.16□□□□□ -0.94
PTPN12-209ENST00000460731 LOC105371045A0A1W2PR82 267 aa9.15□□□□□ -0.94
PTPN12-209ENST00000460731 CD46P15529 392 aa9.15□□□□□ -0.94
PTPN12-209ENST00000460731 SKOR1P84550 965 aa9.15□□□□□ -0.94
PTPN12-209ENST00000460731 KIFC2Q96AC6 838 aa9.15□□□□□ -0.94
PTPN12-209ENST00000460731 USB1Q9BQ65 265 aaKnown RBP9.15□□□□□ -0.94
PTPN12-209ENST00000460731 UBTFP17480 764 aaKnown RBP9.14□□□□□ -0.95
PTPN12-209ENST00000460731 WNT7BP56706 349 aa9.13□□□□□ -0.95
PTPN12-209ENST00000460731 RC3H1Q5TC82 1133 aaKnown RBP9.13□□□□□ -0.95
PTPN12-209ENST00000460731 DISP1Q96F81 1524 aa9.13□□□□□ -0.95
PTPN12-209ENST00000460731 CTTNBP2Q8WZ74 1663 aa9.13□□□□□ -0.95
PTPN12-209ENST00000460731 PRG4Q92954 1404 aaPredicted RBP9.13□□□□□ -0.95
PTPN12-209ENST00000460731 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
PTPN12-209ENST00000460731 ARHGEF11O15085 1522 aa9.1□□□□□ -0.95
PTPN12-209ENST00000460731 KDM4AO75164 1064 aa9.1□□□□□ -0.95
PTPN12-209ENST00000460731 CARMIL2Q6F5E8 1435 aa9.1□□□□□ -0.95
PTPN12-209ENST00000460731 SAMD9Q5K651 1589 aa9.09□□□□□ -0.95
PTPN12-209ENST00000460731 ERCC6L2Q5T890 1561 aa9.08□□□□□ -0.96
PTPN12-209ENST00000460731 SIAH2O43255 324 aa9.08□□□□□ -0.96
PTPN12-209ENST00000460731 EFCAB5A4FU69 1503 aa9.08□□□□□ -0.96
PTPN12-209ENST00000460731 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
PTPN12-209ENST00000460731 USP46P62068 366 aa9.07□□□□□ -0.96
PTPN12-209ENST00000460731 HLA-CQ95604 372 aa9.07□□□□□ -0.96
PTPN12-209ENST00000460731 RIMBP3CA6NJZ7 1639 aa9.06□□□□□ -0.96
PTPN12-209ENST00000460731 RIMBP3BA6NNM3 1639 aa9.06□□□□□ -0.96
PTPN12-209ENST00000460731 KIAA0556O60303 1618 aa9.06□□□□□ -0.96
PTPN12-209ENST00000460731 RIMBP3Q9UFD9 1639 aa9.06□□□□□ -0.96
PTPN12-209ENST00000460731 NPAS3Q8IXF0 933 aa9.06□□□□□ -0.96
PTPN12-209ENST00000460731 NXF1Q9UBU9 619 aaKnown RBP9.06□□□□□ -0.96
PTPN12-209ENST00000460731 PTPRGP23470 1445 aa9.05□□□□□ -0.96
PTPN12-209ENST00000460731 ARAP1Q96P48 1450 aa9.05□□□□□ -0.96
PTPN12-209ENST00000460731 ALDH1A1P00352 501 aa9.05□□□□□ -0.96
PTPN12-209ENST00000460731 TRIM46Q7Z4K8 759 aa9.05□□□□□ -0.96
PTPN12-209ENST00000460731 GPIHBP1Q8IV16 184 aa9.05□□□□□ -0.96
PTPN12-209ENST00000460731 CLIP1P30622 1438 aa9.05□□□□□ -0.96
PTPN12-209ENST00000460731 CEP162Q5TB80 1403 aa9.05□□□□□ -0.96
PTPN12-209ENST00000460731 HOXA2O43364 376 aa9.04□□□□□ -0.96
PTPN12-209ENST00000460731 GMPRP36959 345 aa9.04□□□□□ -0.96
PTPN12-209ENST00000460731 CCDC24Q8N4L8 307 aa9.04□□□□□ -0.96
PTPN12-209ENST00000460731 SLC16A10Q8TF71 515 aa9.04□□□□□ -0.96
PTPN12-209ENST00000460731 JUNDP17535 347 aa9.03□□□□□ -0.96
PTPN12-209ENST00000460731 PTCRAQ6ISU1 281 aaPredicted RBP9.03□□□□□ -0.96
PTPN12-209ENST00000460731 UHRF1BP1LA0JNW5 1464 aa9.02□□□□□ -0.96
PTPN12-209ENST00000460731 MAP2K5Q13163 448 aa9.02□□□□□ -0.97
PTPN12-209ENST00000460731 CYB5RLQ6IPT4 315 aa9.01□□□□□ -0.97
PTPN12-209ENST00000460731 UACAQ9BZF9 1416 aa9.01□□□□□ -0.97
PTPN12-209ENST00000460731 ABCA8O94911 1581 aa9□□□□□ -0.97
PTPN12-209ENST00000460731 FHOD3Q2V2M9 1422 aa9□□□□□ -0.97
PTPN12-209ENST00000460731 FMN1Q68DA7 1419 aa9□□□□□ -0.97
PTPN12-209ENST00000460731 LOC100996750A0A140TA64 210 aa9□□□□□ -0.97
PTPN12-209ENST00000460731 FAM181BA6NEQ2 426 aa9□□□□□ -0.97
PTPN12-209ENST00000460731 H3BM21 787 aa9□□□□□ -0.97
PTPN12-209ENST00000460731 IRF6O14896 467 aa9□□□□□ -0.97
PTPN12-209ENST00000460731 BMP1P13497 986 aa9□□□□□ -0.97
PTPN12-209ENST00000460731 ZSCAN1Q8NBB4 408 aa9□□□□□ -0.97
PTPN12-209ENST00000460731 IRF7Q92985 503 aa9□□□□□ -0.97
PTPN12-209ENST00000460731 KRTAP4-6Q9BYQ5 205 aa9□□□□□ -0.97
PTPN12-209ENST00000460731 CAPN5O15484 640 aaPredicted RBP8.99□□□□□ -0.97
PTPN12-209ENST00000460731 GUCA2AQ02747 115 aa8.99□□□□□ -0.97
PTPN12-209ENST00000460731 SYMPKQ92797 1274 aaKnown RBP8.99□□□□□ -0.97
PTPN12-209ENST00000460731 MDM2Q00987 491 aaPredicted RBP8.98□□□□□ -0.97
PTPN12-209ENST00000460731 RETREG3Q86VR2 466 aa8.98□□□□□ -0.97
PTPN12-209ENST00000460731 ERBB4Q15303 1308 aa8.98□□□□□ -0.97
PTPN12-209ENST00000460731 CASKIN1Q8WXD9 1431 aa8.97□□□□□ -0.97
PTPN12-209ENST00000460731 PLB1Q6P1J6 1458 aa8.97□□□□□ -0.97
PTPN12-209ENST00000460731 KDM5BQ9UGL1 1544 aa8.97□□□□□ -0.97
PTPN12-209ENST00000460731 EHBP1Q8NDI1 1231 aa8.97□□□□□ -0.97
PTPN12-209ENST00000460731 NUDT12Q9BQG2 462 aa8.97□□□□□ -0.97
PTPN12-209ENST00000460731 ABCC2Q92887 1545 aa8.96□□□□□ -0.97
PTPN12-209ENST00000460731 RANGAP1P46060 587 aaPredicted RBP8.96□□□□□ -0.98
PTPN12-209ENST00000460731 SH3BP2P78314 561 aa8.96□□□□□ -0.98
PTPN12-209ENST00000460731 ADCY10Q96PN6 1610 aa8.95□□□□□ -0.98
PTPN12-209ENST00000460731 VPS8Q8N3P4 1428 aa8.95□□□□□ -0.98
PTPN12-209ENST00000460731 ATP10BO94823 1461 aa8.95□□□□□ -0.98
PTPN12-209ENST00000460731 NUP153P49790 1475 aaKnown RBP8.95□□□□□ -0.98
PTPN12-209ENST00000460731 FAM217BQ9NTX9 383 aaPredicted RBP8.94□□□□□ -0.98
PTPN12-209ENST00000460731 WASF2Q9Y6W5 498 aa8.94□□□□□ -0.98
PTPN12-209ENST00000460731 MINK1Q8N4C8 1332 aaPredicted RBP8.94□□□□□ -0.98
PTPN12-209ENST00000460731 VEGFBP49765 207 aa8.93□□□□□ -0.98
PTPN12-209ENST00000460731 MPNDQ8N594 471 aa8.93□□□□□ -0.98
PTPN12-209ENST00000460731 ZFP42Q96MM3 310 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms