RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 TRIM37O94972 964 aa13.83□□□□□ -0.2
SCNM1-203ENST00000459799 ZNF784Q8NCA9 323 aaPredicted RBP13.83□□□□□ -0.2
SCNM1-203ENST00000459799 RGPD3A6NKT7 1758 aaPredicted RBP13.83□□□□□ -0.2
SCNM1-203ENST00000459799 RGPD4Q7Z3J3 1758 aa13.83□□□□□ -0.2
SCNM1-203ENST00000459799 ABCC11Q96J66 1382 aa13.83□□□□□ -0.2
SCNM1-203ENST00000459799 MYOM1P52179 1685 aa13.82□□□□□ -0.2
SCNM1-203ENST00000459799 SENP3-EIF4A1A0A087X0R7 540 aa13.82□□□□□ -0.2
SCNM1-203ENST00000459799 PSME1Q06323 249 aa13.82□□□□□ -0.2
SCNM1-203ENST00000459799 PPP4R3CPQ6ZMV5 832 aa13.82□□□□□ -0.2
SCNM1-203ENST00000459799 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
SCNM1-203ENST00000459799 CHD4Q14839 1912 aa13.82□□□□□ -0.2
SCNM1-203ENST00000459799 SPON1Q9HCB6 807 aa13.81□□□□□ -0.2
SCNM1-203ENST00000459799 STK26Q9P289 416 aa13.81□□□□□ -0.2
SCNM1-203ENST00000459799 PPP1R1BQ9UD71 204 aaPredicted RBP13.81□□□□□ -0.2
SCNM1-203ENST00000459799 APBA3O96018 575 aa13.8□□□□□ -0.2
SCNM1-203ENST00000459799 LMOD2Q6P5Q4 547 aa13.8□□□□□ -0.2
SCNM1-203ENST00000459799 ADGRF5Q8IZF2 1346 aa13.8□□□□□ -0.2
SCNM1-203ENST00000459799 PHRF1Q9P1Y6 1649 aaKnown RBP13.79□□□□□ -0.2
SCNM1-203ENST00000459799 KCNQ2O43526 872 aa13.79□□□□□ -0.2
SCNM1-203ENST00000459799 FAM196AQ6ZSG2 479 aa13.79□□□□□ -0.2
SCNM1-203ENST00000459799 PIK3C2GO75747 1445 aa13.79□□□□□ -0.2
SCNM1-203ENST00000459799 YTHDC2Q9H6S0 1430 aaKnown RBP13.79□□□□□ -0.2
SCNM1-203ENST00000459799 SPATA31A1Q5TZJ5 1347 aa13.78□□□□□ -0.2
SCNM1-203ENST00000459799 ANKARQ7Z5J8 1434 aa13.76□□□□□ -0.21
SCNM1-203ENST00000459799 NBPF8Q3BBV2 869 aa13.76□□□□□ -0.21
SCNM1-203ENST00000459799 NBPF14Q5TI25 921 aa13.76□□□□□ -0.21
SCNM1-203ENST00000459799 ITGAEP38570 1179 aa13.75□□□□□ -0.21
SCNM1-203ENST00000459799 C1QTNF8P60827 252 aa13.75□□□□□ -0.21
SCNM1-203ENST00000459799 TMEM132EQ6IEE7 984 aa13.75□□□□□ -0.21
SCNM1-203ENST00000459799 PEAK1Q9H792 1746 aa13.75□□□□□ -0.21
SCNM1-203ENST00000459799 PARP4Q9UKK3 1724 aaKnown RBP13.75□□□□□ -0.21
SCNM1-203ENST00000459799 SPATA31E1Q6ZUB1 1445 aa13.74□□□□□ -0.21
SCNM1-203ENST00000459799 SBF2Q86WG5 1849 aa13.74□□□□□ -0.21
SCNM1-203ENST00000459799 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
SCNM1-203ENST00000459799 PMFBP1Q8TBY8 1022 aa13.72□□□□□ -0.21
SCNM1-203ENST00000459799 ANKRD30BQ9BXX2 1392 aa13.71□□□□□ -0.21
SCNM1-203ENST00000459799 PRDM11Q9NQV5 511 aa13.71□□□□□ -0.21
SCNM1-203ENST00000459799 LMO7Q8WWI1 1683 aa13.71□□□□□ -0.21
SCNM1-203ENST00000459799 GOLGB1Q14789 3259 aaKnown RBP13.71□□□□□ -0.22
SCNM1-203ENST00000459799 KIAA0232Q92628 1395 aa13.71□□□□□ -0.22
SCNM1-203ENST00000459799 SIRT1Q96EB6 747 aa13.7□□□□□ -0.22
SCNM1-203ENST00000459799 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
SCNM1-203ENST00000459799 SSH2Q76I76 1423 aa13.7□□□□□ -0.22
SCNM1-203ENST00000459799 DLC1Q96QB1 1528 aa13.69□□□□□ -0.22
SCNM1-203ENST00000459799 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
SCNM1-203ENST00000459799 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
SCNM1-203ENST00000459799 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
SCNM1-203ENST00000459799 PTGER2P43116 358 aa13.68□□□□□ -0.22
SCNM1-203ENST00000459799 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
SCNM1-203ENST00000459799 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
SCNM1-203ENST00000459799 PDGFDQ9GZP0 370 aaPredicted RBP13.68□□□□□ -0.22
SCNM1-203ENST00000459799 STRN4Q9NRL3 753 aa13.68□□□□□ -0.22
SCNM1-203ENST00000459799 GPRASP1Q5JY77 1395 aa13.68□□□□□ -0.22
SCNM1-203ENST00000459799 ITSN1Q15811 1721 aa13.67□□□□□ -0.22
SCNM1-203ENST00000459799 PDE3BQ13370 1112 aa13.66□□□□□ -0.22
SCNM1-203ENST00000459799 SAFB2Q14151 953 aaKnown RBP eCLIP13.66□□□□□ -0.22
SCNM1-203ENST00000459799 CHRNA2Q15822 529 aa13.66□□□□□ -0.22
SCNM1-203ENST00000459799 USP35Q9P2H5 1018 aa13.66□□□□□ -0.22
SCNM1-203ENST00000459799 WNK3Q9BYP7 1800 aa13.66□□□□□ -0.22
SCNM1-203ENST00000459799 PRR36Q9H6K5 1346 aa13.65□□□□□ -0.22
SCNM1-203ENST00000459799 SHANK3Q9BYB0 1731 aa13.65□□□□□ -0.22
SCNM1-203ENST00000459799 PRAM1Q96QH2 718 aa13.65□□□□□ -0.22
SCNM1-203ENST00000459799 OVOS2A0A0G2JMS6 1433 aa13.64□□□□□ -0.23
SCNM1-203ENST00000459799 OVOS2A0A0J9YW53 1432 aa13.64□□□□□ -0.23
SCNM1-203ENST00000459799 OVOS2Q6IE36 1432 aa13.64□□□□□ -0.23
SCNM1-203ENST00000459799 ATP7BP35670 1465 aa13.64□□□□□ -0.23
SCNM1-203ENST00000459799 DHX57Q6P158 1386 aaKnown RBP13.64□□□□□ -0.23
SCNM1-203ENST00000459799 ZBTB7AO95365 584 aa13.64□□□□□ -0.23
SCNM1-203ENST00000459799 FHDC1Q9C0D6 1143 aaPredicted RBP13.64□□□□□ -0.23
SCNM1-203ENST00000459799 ADGRB1O14514 1584 aa13.63□□□□□ -0.23
SCNM1-203ENST00000459799 RGL3Q3MIN7 710 aa13.63□□□□□ -0.23
SCNM1-203ENST00000459799 SYT17Q9BSW7 474 aa13.63□□□□□ -0.23
SCNM1-203ENST00000459799 SLC4A1APQ9BWU0 796 aaKnown RBP13.63□□□□□ -0.23
SCNM1-203ENST00000459799 AKAP12Q02952 1782 aa13.62□□□□□ -0.23
SCNM1-203ENST00000459799 EIF3AQ14152 1382 aaKnown RBP13.61□□□□□ -0.23
SCNM1-203ENST00000459799 TOPAZ1Q8N9V7 1692 aa13.61□□□□□ -0.23
SCNM1-203ENST00000459799 PLSCR1O15162 318 aa13.61□□□□□ -0.23
SCNM1-203ENST00000459799 LARP1Q6PKG0 1096 aaKnown RBP13.61□□□□□ -0.23
SCNM1-203ENST00000459799 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
SCNM1-203ENST00000459799 C14orf93Q9H972 538 aaKnown RBP13.61□□□□□ -0.23
SCNM1-203ENST00000459799 GIGYF1O75420 1035 aaPredicted RBP13.6□□□□□ -0.23
SCNM1-203ENST00000459799 SGIP1Q9BQI5 828 aa13.6□□□□□ -0.23
SCNM1-203ENST00000459799 COL5A2P05997 1499 aaPredicted RBP13.6□□□□□ -0.23
SCNM1-203ENST00000459799 MAP3K5Q99683 1374 aa13.59□□□□□ -0.23
SCNM1-203ENST00000459799 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
SCNM1-203ENST00000459799 ZC3H6P61129 1189 aaKnown RBP13.59□□□□□ -0.23
SCNM1-203ENST00000459799 PTF1AQ7RTS3 328 aa13.59□□□□□ -0.23
SCNM1-203ENST00000459799 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
SCNM1-203ENST00000459799 CPDO75976 1380 aa13.58□□□□□ -0.23
SCNM1-203ENST00000459799 PAPPAQ13219 1627 aa13.58□□□□□ -0.24
SCNM1-203ENST00000459799 CFAP70Q5T0N1 1121 aa13.58□□□□□ -0.24
SCNM1-203ENST00000459799 PROM2Q8N271 834 aa13.58□□□□□ -0.24
SCNM1-203ENST00000459799 HIRIP3Q9BW71 556 aaPredicted RBP13.58□□□□□ -0.24
SCNM1-203ENST00000459799 C11orf95C9JLR9 678 aaPredicted RBP13.57□□□□□ -0.24
SCNM1-203ENST00000459799 THRAP3Q9Y2W1 955 aaKnown RBP13.57□□□□□ -0.24
SCNM1-203ENST00000459799 BCL11BQ9C0K0 894 aaPredicted RBP13.56□□□□□ -0.24
SCNM1-203ENST00000459799 POGKQ9P215 609 aa13.56□□□□□ -0.24
SCNM1-203ENST00000459799 ARHGEF28Q8N1W1 1705 aaKnown RBP13.56□□□□□ -0.24
SCNM1-203ENST00000459799 CRB1P82279 1406 aa13.56□□□□□ -0.24
SCNM1-203ENST00000459799 EVA1CP58658 441 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms