RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 NUDT7P0C024 238 aa12.62□□□□□ -0.39
LINC01888-202ENST00000457602 ALKQ9UM73 1620 aa12.62□□□□□ -0.39
LINC01888-202ENST00000457602 ERBB3P21860 1342 aa12.62□□□□□ -0.39
LINC01888-202ENST00000457602 SLC26A8Q96RN1 970 aa12.61□□□□□ -0.39
LINC01888-202ENST00000457602 SLC52A1Q9NWF4 448 aa12.61□□□□□ -0.39
LINC01888-202ENST00000457602 NOS1P29475 1434 aa12.61□□□□□ -0.39
LINC01888-202ENST00000457602 MED1Q15648 1581 aaPredicted RBP12.6□□□□□ -0.39
LINC01888-202ENST00000457602 ADGRB3O60242 1522 aa12.59□□□□□ -0.39
LINC01888-202ENST00000457602 KDM5AP29375 1690 aaKnown RBP12.59□□□□□ -0.39
LINC01888-202ENST00000457602 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
LINC01888-202ENST00000457602 ITGAEP38570 1179 aa12.59□□□□□ -0.39
LINC01888-202ENST00000457602 VARS2Q5ST30 1063 aaKnown RBP12.59□□□□□ -0.39
LINC01888-202ENST00000457602 RPRD2Q5VT52 1461 aaKnown RBP12.58□□□□□ -0.4
LINC01888-202ENST00000457602 PPP1R15AO75807 674 aaPredicted RBP12.57□□□□□ -0.4
LINC01888-202ENST00000457602 KCNA6P17658 529 aa12.57□□□□□ -0.4
LINC01888-202ENST00000457602 PROSER2Q86WR7 435 aaPredicted RBP12.57□□□□□ -0.4
LINC01888-202ENST00000457602 PPARGC1BQ86YN6 1023 aaKnown RBP12.57□□□□□ -0.4
LINC01888-202ENST00000457602 TMEM94Q12767 1356 aa12.56□□□□□ -0.4
LINC01888-202ENST00000457602 HDGFP51858 240 aaKnown RBP12.56□□□□□ -0.4
LINC01888-202ENST00000457602 RBM33Q96EV2 1170 aaKnown RBP12.56□□□□□ -0.4
LINC01888-202ENST00000457602 EMILIN3Q9NT22 766 aa12.56□□□□□ -0.4
LINC01888-202ENST00000457602 TET3O43151 1660 aa12.55□□□□□ -0.4
LINC01888-202ENST00000457602 CAMK2BQ13554 666 aa12.55□□□□□ -0.4
LINC01888-202ENST00000457602 UPF1Q92900 1129 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC01888-202ENST00000457602 KRTAP3-3Q9BYR6 98 aa12.55□□□□□ -0.4
LINC01888-202ENST00000457602 KRTAP3-2Q9BYR7 98 aa12.55□□□□□ -0.4
LINC01888-202ENST00000457602 LHX6Q9UPM6 363 aa12.55□□□□□ -0.4
LINC01888-202ENST00000457602 ROCK1Q13464 1354 aa12.54□□□□□ -0.4
LINC01888-202ENST00000457602 XIRP1Q702N8 1843 aaKnown RBP12.53□□□□□ -0.4
LINC01888-202ENST00000457602 UNC13BO14795 1591 aa12.53□□□□□ -0.4
LINC01888-202ENST00000457602 TBC1D12O60347 775 aa12.53□□□□□ -0.4
LINC01888-202ENST00000457602 RIMS2Q9UQ26 1411 aa12.53□□□□□ -0.4
LINC01888-202ENST00000457602 GCC2Q8IWJ2 1684 aa12.52□□□□□ -0.4
LINC01888-202ENST00000457602 NUP155O75694 1391 aa12.52□□□□□ -0.41
LINC01888-202ENST00000457602 PLEKHG1Q9ULL1 1385 aa12.52□□□□□ -0.41
LINC01888-202ENST00000457602 NUTM2DQ5VT03 806 aaPredicted RBP12.51□□□□□ -0.41
LINC01888-202ENST00000457602 ZNF687Q8N1G0 1237 aa12.51□□□□□ -0.41
LINC01888-202ENST00000457602 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC01888-202ENST00000457602 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
LINC01888-202ENST00000457602 ZFYVE9O95405 1425 aa12.51□□□□□ -0.41
LINC01888-202ENST00000457602 FAM135BQ49AJ0 1406 aa12.51□□□□□ -0.41
LINC01888-202ENST00000457602 MYO5BQ9ULV0 1848 aa12.51□□□□□ -0.41
LINC01888-202ENST00000457602 MSH6P52701 1360 aa12.5□□□□□ -0.41
LINC01888-202ENST00000457602 NKTRP30414 1462 aaKnown RBP12.5□□□□□ -0.41
LINC01888-202ENST00000457602 TMEM131LA2VDJ0 1609 aa12.5□□□□□ -0.41
LINC01888-202ENST00000457602 E9PCH4 1651 aa12.49□□□□□ -0.41
LINC01888-202ENST00000457602 NWD1Q149M9 1564 aa12.49□□□□□ -0.41
LINC01888-202ENST00000457602 PLCB2Q00722 1185 aa12.49□□□□□ -0.41
LINC01888-202ENST00000457602 IQGAP3Q86VI3 1631 aa12.48□□□□□ -0.41
LINC01888-202ENST00000457602 C14orf37Q86TY3 774 aa12.48□□□□□ -0.41
LINC01888-202ENST00000457602 TBX22Q9Y458 520 aa12.48□□□□□ -0.41
LINC01888-202ENST00000457602 ROBO1Q9Y6N7 1651 aa12.46□□□□□ -0.41
LINC01888-202ENST00000457602 SLAIN2Q9P270 581 aa12.46□□□□□ -0.41
LINC01888-202ENST00000457602 ANO8Q9HCE9 1232 aaPredicted RBP12.45□□□□□ -0.42
LINC01888-202ENST00000457602 CHD2O14647 1828 aaKnown RBP12.44□□□□□ -0.42
LINC01888-202ENST00000457602 PSDA5PKW4 1024 aaPredicted RBP12.44□□□□□ -0.42
LINC01888-202ENST00000457602 ZNF326Q5BKZ1 582 aaKnown RBP12.44□□□□□ -0.42
LINC01888-202ENST00000457602 ADAMTS13Q76LX8 1427 aa12.44□□□□□ -0.42
LINC01888-202ENST00000457602 EVI5O60447 810 aa12.43□□□□□ -0.42
LINC01888-202ENST00000457602 POTEEQ6S8J3 1075 aa12.43□□□□□ -0.42
LINC01888-202ENST00000457602 RGS17Q9UGC6 210 aaPredicted RBP12.42□□□□□ -0.42
LINC01888-202ENST00000457602 AMOTL2Q9Y2J4 779 aa12.42□□□□□ -0.42
LINC01888-202ENST00000457602 DIP2AQ14689 1571 aa12.42□□□□□ -0.42
LINC01888-202ENST00000457602 PIK3R4Q99570 1358 aa12.42□□□□□ -0.42
LINC01888-202ENST00000457602 ATF3P18847 181 aa12.41□□□□□ -0.42
LINC01888-202ENST00000457602 MAP3K9P80192 1104 aa12.41□□□□□ -0.42
LINC01888-202ENST00000457602 NCOA3Q9Y6Q9 1424 aa12.41□□□□□ -0.42
LINC01888-202ENST00000457602 C19orf44Q9H6X5 657 aa12.4□□□□□ -0.42
LINC01888-202ENST00000457602 TRPM2O94759 1503 aa12.4□□□□□ -0.42
LINC01888-202ENST00000457602 PHLPP1O60346 1717 aa12.4□□□□□ -0.43
LINC01888-202ENST00000457602 SPHKAPQ2M3C7 1700 aa12.4□□□□□ -0.43
LINC01888-202ENST00000457602 DPYSL4O14531 572 aa12.39□□□□□ -0.43
LINC01888-202ENST00000457602 E2F4Q16254 413 aa12.39□□□□□ -0.43
LINC01888-202ENST00000457602 JCADQ9P266 1359 aa12.39□□□□□ -0.43
LINC01888-202ENST00000457602 RRBP1Q9P2E9 1410 aaKnown RBP12.38□□□□□ -0.43
LINC01888-202ENST00000457602 PBX2P40425 430 aa12.38□□□□□ -0.43
LINC01888-202ENST00000457602 TRIM52Q96A61 297 aa12.38□□□□□ -0.43
LINC01888-202ENST00000457602 PTPRUQ92729 1446 aa12.37□□□□□ -0.43
LINC01888-202ENST00000457602 FOSBP53539 338 aa12.37□□□□□ -0.43
LINC01888-202ENST00000457602 POTEAQ6S8J7 498 aa12.37□□□□□ -0.43
LINC01888-202ENST00000457602 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
LINC01888-202ENST00000457602 ARIH1Q9Y4X5 557 aaPredicted RBP12.37□□□□□ -0.43
LINC01888-202ENST00000457602 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.37□□□□□ -0.43
LINC01888-202ENST00000457602 NAIPQ13075 1403 aa12.37□□□□□ -0.43
LINC01888-202ENST00000457602 PPP4R3BQ5MIZ7 849 aa12.36□□□□□ -0.43
LINC01888-202ENST00000457602 WDR70Q9NW82 654 aa12.36□□□□□ -0.43
LINC01888-202ENST00000457602 MEX3CQ5U5Q3 659 aaKnown RBP12.35□□□□□ -0.43
LINC01888-202ENST00000457602 SETBP1Q9Y6X0 1596 aa12.35□□□□□ -0.43
LINC01888-202ENST00000457602 METP08581 1390 aa12.34□□□□□ -0.43
LINC01888-202ENST00000457602 CLTCL1P53675 1640 aa12.34□□□□□ -0.43
LINC01888-202ENST00000457602 COL16A1Q07092 1604 aaPredicted RBP12.33□□□□□ -0.43
LINC01888-202ENST00000457602 NRXN3Q9Y4C0 1643 aa12.33□□□□□ -0.43
LINC01888-202ENST00000457602 PDIA6Q15084 440 aa12.33□□□□□ -0.44
LINC01888-202ENST00000457602 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
LINC01888-202ENST00000457602 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.44
LINC01888-202ENST00000457602 SPATA31A6Q5VVP1 1343 aa12.33□□□□□ -0.44
LINC01888-202ENST00000457602 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC01888-202ENST00000457602 BRINP3Q76B58 766 aa12.32□□□□□ -0.44
LINC01888-202ENST00000457602 NEXMIFQ5QGS0 1516 aa12.32□□□□□ -0.44
LINC01888-202ENST00000457602 XRN1Q8IZH2 1706 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms