RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 MAP2P11137 1827 aaKnown RBP17.55■□□□□ 0.4
CASC4P1-201ENST00000456608 PMFBP1Q8TBY8 1022 aa17.54■□□□□ 0.4
CASC4P1-201ENST00000456608 C19orf44Q9H6X5 657 aa17.54■□□□□ 0.4
CASC4P1-201ENST00000456608 SHPRHQ149N8 1683 aa17.54■□□□□ 0.4
CASC4P1-201ENST00000456608 INSRP06213 1382 aa17.53■□□□□ 0.4
CASC4P1-201ENST00000456608 KIF1AQ12756 1690 aa17.53■□□□□ 0.4
CASC4P1-201ENST00000456608 USP54Q70EL1 1684 aa17.53■□□□□ 0.4
CASC4P1-201ENST00000456608 PPP4R3CPQ6ZMV5 832 aa17.52■□□□□ 0.4
CASC4P1-201ENST00000456608 NME9Q86XW9 330 aa17.52■□□□□ 0.4
CASC4P1-201ENST00000456608 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
CASC4P1-201ENST00000456608 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.4
CASC4P1-201ENST00000456608 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
CASC4P1-201ENST00000456608 TNNT2P45379 298 aaPredicted RBP17.51■□□□□ 0.39
CASC4P1-201ENST00000456608 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
CASC4P1-201ENST00000456608 PHF8Q9UPP1 1060 aa17.51■□□□□ 0.39
CASC4P1-201ENST00000456608 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
CASC4P1-201ENST00000456608 TTC21AQ8NDW8 1320 aa17.51■□□□□ 0.39
CASC4P1-201ENST00000456608 PIK3C2AO00443 1686 aa17.51■□□□□ 0.39
CASC4P1-201ENST00000456608 OVOS2A0A0J9YW53 1432 aa17.5■□□□□ 0.39
CASC4P1-201ENST00000456608 OVOS2Q6IE36 1432 aa17.5■□□□□ 0.39
CASC4P1-201ENST00000456608 C1orf167Q5SNV9 1468 aa17.5■□□□□ 0.39
CASC4P1-201ENST00000456608 ZNF335Q9H4Z2 1342 aaPredicted RBP17.5■□□□□ 0.39
CASC4P1-201ENST00000456608 MARF1Q9Y4F3 1742 aaKnown RBP17.5■□□□□ 0.39
CASC4P1-201ENST00000456608 MST1RQ04912 1400 aa17.5■□□□□ 0.39
CASC4P1-201ENST00000456608 BLMP54132 1417 aaPredicted RBP17.49■□□□□ 0.39
CASC4P1-201ENST00000456608 MTHFSP49914 203 aa17.48■□□□□ 0.39
CASC4P1-201ENST00000456608 ZRANB1Q9UGI0 708 aa17.48■□□□□ 0.39
CASC4P1-201ENST00000456608 COG3Q96JB2 828 aa17.47■□□□□ 0.39
CASC4P1-201ENST00000456608 AATKQ6ZMQ8 1374 aa17.47■□□□□ 0.39
CASC4P1-201ENST00000456608 USP31Q70CQ4 1352 aa17.47■□□□□ 0.39
CASC4P1-201ENST00000456608 COL3A1P02461 1466 aaPredicted RBP17.47■□□□□ 0.39
CASC4P1-201ENST00000456608 ESCO1Q5FWF5 840 aa17.47■□□□□ 0.39
CASC4P1-201ENST00000456608 MSH6P52701 1360 aa17.46■□□□□ 0.39
CASC4P1-201ENST00000456608 ATF3P18847 181 aa17.46■□□□□ 0.38
CASC4P1-201ENST00000456608 TRPM3Q9HCF6 1732 aaPredicted RBP17.45■□□□□ 0.38
CASC4P1-201ENST00000456608 SMG6Q86US8 1419 aaKnown RBP17.45■□□□□ 0.38
CASC4P1-201ENST00000456608 WDR43Q15061 677 aaKnown RBP eCLIP17.45■□□□□ 0.38
CASC4P1-201ENST00000456608 CFAP53Q96M91 514 aa17.45■□□□□ 0.38
CASC4P1-201ENST00000456608 ORAI2Q96SN7 254 aa17.45■□□□□ 0.38
CASC4P1-201ENST00000456608 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
CASC4P1-201ENST00000456608 ZBED9Q6R2W3 1325 aa17.44■□□□□ 0.38
CASC4P1-201ENST00000456608 CADPS2Q86UW7 1296 aa17.44■□□□□ 0.38
CASC4P1-201ENST00000456608 PNPLA6Q8IY17 1366 aa17.44■□□□□ 0.38
CASC4P1-201ENST00000456608 POLKQ9UBT6 870 aa17.43■□□□□ 0.38
CASC4P1-201ENST00000456608 CDK12Q9NYV4 1490 aaPredicted RBP17.41■□□□□ 0.38
CASC4P1-201ENST00000456608 FBLN1P23142 703 aa17.4■□□□□ 0.38
CASC4P1-201ENST00000456608 PEAK1Q9H792 1746 aa17.39■□□□□ 0.37
CASC4P1-201ENST00000456608 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
CASC4P1-201ENST00000456608 PSME1Q06323 249 aa17.39■□□□□ 0.37
CASC4P1-201ENST00000456608 LTBP4Q8N2S1 1624 aa17.38■□□□□ 0.37
CASC4P1-201ENST00000456608 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
CASC4P1-201ENST00000456608 FOXO3O43524 673 aa17.37■□□□□ 0.37
CASC4P1-201ENST00000456608 PAK3O75914 559 aaPredicted RBP17.36■□□□□ 0.37
CASC4P1-201ENST00000456608 NLRP6P59044 892 aa17.36■□□□□ 0.37
CASC4P1-201ENST00000456608 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
CASC4P1-201ENST00000456608 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
CASC4P1-201ENST00000456608 RRS1Q15050 365 aaKnown RBP17.35■□□□□ 0.37
CASC4P1-201ENST00000456608 KRT28Q7Z3Y7 464 aa17.35■□□□□ 0.37
CASC4P1-201ENST00000456608 LTN1O94822 1766 aa17.34■□□□□ 0.37
CASC4P1-201ENST00000456608 DIAPH1O60610 1272 aaKnown RBP17.34■□□□□ 0.37
CASC4P1-201ENST00000456608 NUDCQ9Y266 331 aa17.34■□□□□ 0.37
CASC4P1-201ENST00000456608 SLIT3O75094 1523 aa17.33■□□□□ 0.36
CASC4P1-201ENST00000456608 PXDNQ92626 1479 aa17.33■□□□□ 0.36
CASC4P1-201ENST00000456608 NFAT5O94916 1531 aa17.32■□□□□ 0.36
CASC4P1-201ENST00000456608 PPM1GO15355 546 aaPredicted RBP17.32■□□□□ 0.36
CASC4P1-201ENST00000456608 NPHP3Q7Z494 1330 aa17.32■□□□□ 0.36
CASC4P1-201ENST00000456608 SENP3-EIF4A1A0A087X0R7 540 aa17.31■□□□□ 0.36
CASC4P1-201ENST00000456608 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
CASC4P1-201ENST00000456608 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
CASC4P1-201ENST00000456608 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
CASC4P1-201ENST00000456608 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
CASC4P1-201ENST00000456608 MAP3K19Q56UN5 1328 aa17.31■□□□□ 0.36
CASC4P1-201ENST00000456608 NHSL1Q5SYE7 1610 aa17.3■□□□□ 0.36
CASC4P1-201ENST00000456608 PHRF1Q9P1Y6 1649 aaKnown RBP17.3■□□□□ 0.36
CASC4P1-201ENST00000456608 U2AF1L5P0DN76 240 aaPredicted RBP17.3■□□□□ 0.36
CASC4P1-201ENST00000456608 U2AF1Q01081 240 aaKnown RBP eCLIP17.3■□□□□ 0.36
CASC4P1-201ENST00000456608 BRINP3Q76B58 766 aa17.3■□□□□ 0.36
CASC4P1-201ENST00000456608 SLAIN2Q9P270 581 aa17.3■□□□□ 0.36
CASC4P1-201ENST00000456608 KIF24Q5T7B8 1368 aa17.3■□□□□ 0.36
CASC4P1-201ENST00000456608 IQSEC2Q5JU85 1478 aa17.3■□□□□ 0.36
CASC4P1-201ENST00000456608 RGPD1P0DJD0 1748 aa17.3■□□□□ 0.36
CASC4P1-201ENST00000456608 IL13P35225 146 aa17.29■□□□□ 0.36
CASC4P1-201ENST00000456608 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
CASC4P1-201ENST00000456608 CRYBG1Q9Y4K1 1723 aa17.29■□□□□ 0.36
CASC4P1-201ENST00000456608 USP19O94966 1318 aa17.29■□□□□ 0.36
CASC4P1-201ENST00000456608 FLT4P35916 1363 aa17.28■□□□□ 0.36
CASC4P1-201ENST00000456608 U2SURPO15042 1029 aaKnown RBP17.28■□□□□ 0.36
CASC4P1-201ENST00000456608 APAF1O14727 1248 aa17.27■□□□□ 0.36
CASC4P1-201ENST00000456608 SOX12O15370 315 aa17.27■□□□□ 0.36
CASC4P1-201ENST00000456608 DDX17Q92841 729 aaKnown RBP17.27■□□□□ 0.36
CASC4P1-201ENST00000456608 MED1Q15648 1581 aaPredicted RBP17.27■□□□□ 0.36
CASC4P1-201ENST00000456608 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
CASC4P1-201ENST00000456608 NGEFQ8N5V2 710 aa17.26■□□□□ 0.35
CASC4P1-201ENST00000456608 SALL2Q9Y467 1007 aaPredicted RBP17.26■□□□□ 0.35
CASC4P1-201ENST00000456608 TNS3Q68CZ2 1445 aa17.26■□□□□ 0.35
CASC4P1-201ENST00000456608 RTL1A6NKG5 1358 aa17.26■□□□□ 0.35
CASC4P1-201ENST00000456608 KCNH5Q8NCM2 988 aa17.25■□□□□ 0.35
CASC4P1-201ENST00000456608 PLEKHF1Q96S99 279 aa17.25■□□□□ 0.35
CASC4P1-201ENST00000456608 ZNF521Q96K83 1311 aa17.25■□□□□ 0.35
CASC4P1-201ENST00000456608 EIF4A2Q14240 407 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms