RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 TMEM132EQ6IEE7 984 aa13.3□□□□□ -0.28
PTCHD1-202ENST00000456522 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
PTCHD1-202ENST00000456522 SLC26A8Q96RN1 970 aa13.3□□□□□ -0.28
PTCHD1-202ENST00000456522 GPHNQ9NQX3 736 aaPredicted RBP13.3□□□□□ -0.28
PTCHD1-202ENST00000456522 ALKQ9UM73 1620 aa13.3□□□□□ -0.28
PTCHD1-202ENST00000456522 NRXN3Q9Y4C0 1643 aa13.3□□□□□ -0.28
PTCHD1-202ENST00000456522 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
PTCHD1-202ENST00000456522 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
PTCHD1-202ENST00000456522 LAMC1P11047 1609 aa13.29□□□□□ -0.28
PTCHD1-202ENST00000456522 IER5LQ5T953 404 aa13.28□□□□□ -0.28
PTCHD1-202ENST00000456522 CARD11Q9BXL7 1154 aa13.28□□□□□ -0.28
PTCHD1-202ENST00000456522 STRCQ7RTU9 1775 aa13.27□□□□□ -0.28
PTCHD1-202ENST00000456522 TULP1O00294 542 aaPredicted RBP13.27□□□□□ -0.29
PTCHD1-202ENST00000456522 ATN1P54259 1190 aaPredicted RBP13.27□□□□□ -0.29
PTCHD1-202ENST00000456522 IRX5P78411 483 aaPredicted RBP13.27□□□□□ -0.29
PTCHD1-202ENST00000456522 STK26Q9P289 416 aa13.27□□□□□ -0.29
PTCHD1-202ENST00000456522 ADAMTS13Q76LX8 1427 aa13.27□□□□□ -0.29
PTCHD1-202ENST00000456522 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.29
PTCHD1-202ENST00000456522 SEMA3EO15041 775 aa13.26□□□□□ -0.29
PTCHD1-202ENST00000456522 ATMINO43313 823 aaPredicted RBP13.26□□□□□ -0.29
PTCHD1-202ENST00000456522 MED14O60244 1454 aa13.26□□□□□ -0.29
PTCHD1-202ENST00000456522 ASXL1Q8IXJ9 1541 aa13.25□□□□□ -0.29
PTCHD1-202ENST00000456522 METP08581 1390 aa13.25□□□□□ -0.29
PTCHD1-202ENST00000456522 MICALL2Q8IY33 904 aa13.25□□□□□ -0.29
PTCHD1-202ENST00000456522 TMEM121BQ9BXQ6 578 aaPredicted RBP13.25□□□□□ -0.29
PTCHD1-202ENST00000456522 TBX22Q9Y458 520 aa13.25□□□□□ -0.29
PTCHD1-202ENST00000456522 ADGRB1O14514 1584 aa13.24□□□□□ -0.29
PTCHD1-202ENST00000456522 GPRASP1Q5JY77 1395 aa13.24□□□□□ -0.29
PTCHD1-202ENST00000456522 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
PTCHD1-202ENST00000456522 PPP1R15BQ5SWA1 713 aa13.23□□□□□ -0.29
PTCHD1-202ENST00000456522 TRAK1Q9UPV9 953 aa13.23□□□□□ -0.29
PTCHD1-202ENST00000456522 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
PTCHD1-202ENST00000456522 EIF4G2P78344 907 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTCHD1-202ENST00000456522 DPY19L2Q6NUT2 758 aa13.22□□□□□ -0.29
PTCHD1-202ENST00000456522 HIRIP3Q9BW71 556 aaPredicted RBP13.22□□□□□ -0.29
PTCHD1-202ENST00000456522 USP47Q96K76 1375 aa13.21□□□□□ -0.29
PTCHD1-202ENST00000456522 HSPA5P11021 654 aaKnown RBP13.21□□□□□ -0.29
PTCHD1-202ENST00000456522 LRPPRCP42704 1394 aaKnown RBP13.2□□□□□ -0.3
PTCHD1-202ENST00000456522 OCEL1Q9H607 264 aa13.2□□□□□ -0.3
PTCHD1-202ENST00000456522 PTPRUQ92729 1446 aa13.2□□□□□ -0.3
PTCHD1-202ENST00000456522 CHD2O14647 1828 aaKnown RBP13.19□□□□□ -0.3
PTCHD1-202ENST00000456522 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
PTCHD1-202ENST00000456522 ST20-MTHFSA0A0A6YYL1 179 aa13.18□□□□□ -0.3
PTCHD1-202ENST00000456522 SAFB2Q14151 953 aaKnown RBP eCLIP13.18□□□□□ -0.3
PTCHD1-202ENST00000456522 ARHGEF28Q8N1W1 1705 aaKnown RBP13.18□□□□□ -0.3
PTCHD1-202ENST00000456522 EIF3AQ14152 1382 aaKnown RBP13.18□□□□□ -0.3
PTCHD1-202ENST00000456522 PIK3R4Q99570 1358 aa13.18□□□□□ -0.3
PTCHD1-202ENST00000456522 FOXK1P85037 733 aa13.17□□□□□ -0.3
PTCHD1-202ENST00000456522 ZC3H15Q8WU90 426 aaKnown RBP13.17□□□□□ -0.3
PTCHD1-202ENST00000456522 POGKQ9P215 609 aa13.17□□□□□ -0.3
PTCHD1-202ENST00000456522 ABCC11Q96J66 1382 aa13.17□□□□□ -0.3
PTCHD1-202ENST00000456522 KNDC1Q76NI1 1749 aa13.16□□□□□ -0.3
PTCHD1-202ENST00000456522 KCNA6P17658 529 aa13.16□□□□□ -0.3
PTCHD1-202ENST00000456522 SMYD5Q6GMV2 418 aa13.16□□□□□ -0.3
PTCHD1-202ENST00000456522 WAPLQ7Z5K2 1190 aa13.16□□□□□ -0.3
PTCHD1-202ENST00000456522 PRAM1Q96QH2 718 aa13.16□□□□□ -0.3
PTCHD1-202ENST00000456522 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
PTCHD1-202ENST00000456522 CENPJQ9HC77 1338 aaPredicted RBP13.15□□□□□ -0.3
PTCHD1-202ENST00000456522 KIF3CO14782 793 aa13.15□□□□□ -0.3
PTCHD1-202ENST00000456522 DSG2Q14126 1118 aa13.15□□□□□ -0.3
PTCHD1-202ENST00000456522 ROBO2Q9HCK4 1378 aa13.15□□□□□ -0.3
PTCHD1-202ENST00000456522 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
PTCHD1-202ENST00000456522 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
PTCHD1-202ENST00000456522 PLEKHH1Q9ULM0 1364 aa13.14□□□□□ -0.31
PTCHD1-202ENST00000456522 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
PTCHD1-202ENST00000456522 STRCP1A6NGW2 1772 aa13.14□□□□□ -0.31
PTCHD1-202ENST00000456522 TECPR2O15040 1411 aa13.13□□□□□ -0.31
PTCHD1-202ENST00000456522 CPS1P31327 1500 aa13.13□□□□□ -0.31
PTCHD1-202ENST00000456522 MINK1Q8N4C8 1332 aaPredicted RBP13.13□□□□□ -0.31
PTCHD1-202ENST00000456522 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
PTCHD1-202ENST00000456522 NWD1Q149M9 1564 aa13.12□□□□□ -0.31
PTCHD1-202ENST00000456522 PROSER2Q86WR7 435 aaPredicted RBP13.12□□□□□ -0.31
PTCHD1-202ENST00000456522 SIRT1Q96EB6 747 aa13.12□□□□□ -0.31
PTCHD1-202ENST00000456522 RBM33Q96EV2 1170 aaKnown RBP13.12□□□□□ -0.31
PTCHD1-202ENST00000456522 EMILIN3Q9NT22 766 aa13.12□□□□□ -0.31
PTCHD1-202ENST00000456522 GABBR2O75899 941 aa13.11□□□□□ -0.31
PTCHD1-202ENST00000456522 TMC2Q8TDI7 906 aa13.11□□□□□ -0.31
PTCHD1-202ENST00000456522 PTCH1Q13635 1447 aa13.11□□□□□ -0.31
PTCHD1-202ENST00000456522 FAM135BQ49AJ0 1406 aa13.11□□□□□ -0.31
PTCHD1-202ENST00000456522 ZNF316A6NFI3 1004 aaPredicted RBP13.1□□□□□ -0.31
PTCHD1-202ENST00000456522 PDIA6Q15084 440 aa13.1□□□□□ -0.31
PTCHD1-202ENST00000456522 TESK2Q96S53 571 aa13.1□□□□□ -0.31
PTCHD1-202ENST00000456522 POLR3GLQ9BT43 218 aa13.1□□□□□ -0.31
PTCHD1-202ENST00000456522 SPDYE16A6NNV3 312 aaPredicted RBP13.09□□□□□ -0.31
PTCHD1-202ENST00000456522 C14orf37Q86TY3 774 aa13.09□□□□□ -0.31
PTCHD1-202ENST00000456522 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.08□□□□□ -0.32
PTCHD1-202ENST00000456522 TMF1P82094 1093 aa13.08□□□□□ -0.32
PTCHD1-202ENST00000456522 NKTRP30414 1462 aaKnown RBP13.08□□□□□ -0.32
PTCHD1-202ENST00000456522 C11orf95C9JLR9 678 aaPredicted RBP13.07□□□□□ -0.32
PTCHD1-202ENST00000456522 ZMYND10O75800 440 aa13.07□□□□□ -0.32
PTCHD1-202ENST00000456522 PLCG2P16885 1265 aa13.07□□□□□ -0.32
PTCHD1-202ENST00000456522 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
PTCHD1-202ENST00000456522 L3MBTL3Q96JM7 780 aaPredicted RBP13.06□□□□□ -0.32
PTCHD1-202ENST00000456522 EVC2Q86UK5 1308 aa13.06□□□□□ -0.32
PTCHD1-202ENST00000456522 TMEM94Q12767 1356 aa13.06□□□□□ -0.32
PTCHD1-202ENST00000456522 SBNO2Q9Y2G9 1366 aa13.06□□□□□ -0.32
PTCHD1-202ENST00000456522 C2orf72A6NCS6 295 aa13.05□□□□□ -0.32
PTCHD1-202ENST00000456522 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
PTCHD1-202ENST00000456522 TULP4Q9NRJ4 1543 aa13.04□□□□□ -0.32
PTCHD1-202ENST00000456522 DPYSL4O14531 572 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms