RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 MAP7D2Q96T17 732 aa12.1□□□□□ -0.47
SCN5A-210ENST00000455624 GGNBP2Q9H3C7 697 aa12.1□□□□□ -0.47
SCN5A-210ENST00000455624 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
SCN5A-210ENST00000455624 C22orf23Q9BZE7 217 aa12.1□□□□□ -0.47
SCN5A-210ENST00000455624 PRKRIP1Q9H875 184 aaPredicted RBP12.1□□□□□ -0.47
SCN5A-210ENST00000455624 NUTM2BA6NNL0 878 aaPredicted RBP12.1□□□□□ -0.47
SCN5A-210ENST00000455624 NUTM2EB1AL46 878 aaPredicted RBP12.1□□□□□ -0.47
SCN5A-210ENST00000455624 NUTM2AQ8IVF1 878 aaPredicted RBP12.1□□□□□ -0.47
SCN5A-210ENST00000455624 KIF7Q2M1P5 1343 aa12.1□□□□□ -0.47
SCN5A-210ENST00000455624 TATP17735 454 aaPredicted RBP12.09□□□□□ -0.47
SCN5A-210ENST00000455624 STK11IPQ8N1F8 1099 aa12.09□□□□□ -0.47
SCN5A-210ENST00000455624 CABP4P57796 275 aa12.09□□□□□ -0.47
SCN5A-210ENST00000455624 FYCO1Q9BQS8 1478 aa12.09□□□□□ -0.47
SCN5A-210ENST00000455624 CCDC69A6NI79 296 aa12.08□□□□□ -0.48
SCN5A-210ENST00000455624 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.48
SCN5A-210ENST00000455624 CCP110O43303 1012 aa12.08□□□□□ -0.48
SCN5A-210ENST00000455624 MYOM3Q5VTT5 1437 aa12.08□□□□□ -0.48
SCN5A-210ENST00000455624 CNTLNQ9NXG0 1405 aa12.08□□□□□ -0.48
SCN5A-210ENST00000455624 SDF4Q9BRK5 362 aa12.08□□□□□ -0.48
SCN5A-210ENST00000455624 BRPF1P55201 1214 aaPredicted RBP12.08□□□□□ -0.48
SCN5A-210ENST00000455624 RRBP1Q9P2E9 1410 aaKnown RBP12.08□□□□□ -0.48
SCN5A-210ENST00000455624 MATR3P43243 847 aaKnown RBP eCLIP12.07□□□□□ -0.48
SCN5A-210ENST00000455624 ATP2B1P20020 1258 aa12.07□□□□□ -0.48
SCN5A-210ENST00000455624 ZRSR2Q15696 482 aaKnown RBP12.07□□□□□ -0.48
SCN5A-210ENST00000455624 PIP4K2AP48426 406 aaPredicted RBP12.07□□□□□ -0.48
SCN5A-210ENST00000455624 PROSER2Q86WR7 435 aaPredicted RBP12.07□□□□□ -0.48
SCN5A-210ENST00000455624 FAM13BQ9NYF5 915 aa12.07□□□□□ -0.48
SCN5A-210ENST00000455624 PANK1Q8TE04 598 aa12.07□□□□□ -0.48
SCN5A-210ENST00000455624 ERLIN2O94905 339 aa12.06□□□□□ -0.48
SCN5A-210ENST00000455624 GNAI3P08754 354 aa12.06□□□□□ -0.48
SCN5A-210ENST00000455624 CLASRPQ8N2M8 674 aaKnown RBP12.06□□□□□ -0.48
SCN5A-210ENST00000455624 ANKRD18AQ8IVF6 992 aa12.06□□□□□ -0.48
SCN5A-210ENST00000455624 CCDC191Q8NCU4 936 aa12.06□□□□□ -0.48
SCN5A-210ENST00000455624 PDCL3Q9H2J4 239 aa12.06□□□□□ -0.48
SCN5A-210ENST00000455624 SURF6O75683 361 aaKnown RBP12.06□□□□□ -0.48
SCN5A-210ENST00000455624 TSPY26PQ9H489 355 aa12.06□□□□□ -0.48
SCN5A-210ENST00000455624 HMGB2P26583 209 aaKnown RBP12.06□□□□□ -0.48
SCN5A-210ENST00000455624 AAMPQ13685 434 aa12.05□□□□□ -0.48
SCN5A-210ENST00000455624 SOGA3Q5TF21 947 aa12.05□□□□□ -0.48
SCN5A-210ENST00000455624 SMARCA4P51532 1647 aa12.05□□□□□ -0.48
SCN5A-210ENST00000455624 KINO60870 393 aaKnown RBP12.05□□□□□ -0.48
SCN5A-210ENST00000455624 ZHX3Q9H4I2 956 aa12.05□□□□□ -0.48
SCN5A-210ENST00000455624 GAPVD1Q14C86 1478 aa12.05□□□□□ -0.48
SCN5A-210ENST00000455624 TANGO6Q9C0B7 1094 aa12.05□□□□□ -0.48
SCN5A-210ENST00000455624 SPG7Q9UQ90 795 aa12.05□□□□□ -0.48
SCN5A-210ENST00000455624 FANCIQ9NVI1 1328 aa12.04□□□□□ -0.48
SCN5A-210ENST00000455624 NEFHP12036 1026 aa12.04□□□□□ -0.48
SCN5A-210ENST00000455624 SEPT7Q16181 437 aaKnown RBP12.04□□□□□ -0.48
SCN5A-210ENST00000455624 NACAP1Q9BZK3 213 aa12.04□□□□□ -0.48
SCN5A-210ENST00000455624 DACH1Q9UI36 760 aa12.04□□□□□ -0.48
SCN5A-210ENST00000455624 ANKRD62A6NC57 917 aa12.04□□□□□ -0.48
SCN5A-210ENST00000455624 STK38Q15208 465 aa12.04□□□□□ -0.48
SCN5A-210ENST00000455624 TOM1L2Q6ZVM7 507 aa12.04□□□□□ -0.48
SCN5A-210ENST00000455624 CEBPZQ03701 1054 aaKnown RBP12.03□□□□□ -0.48
SCN5A-210ENST00000455624 ZSCAN25Q6NSZ9 544 aa12.03□□□□□ -0.48
SCN5A-210ENST00000455624 ZNHIT6Q9NWK9 470 aaKnown RBP12.03□□□□□ -0.48
SCN5A-210ENST00000455624 NEBLO76041 1014 aa12.03□□□□□ -0.48
SCN5A-210ENST00000455624 GNAI2P04899 355 aa12.03□□□□□ -0.48
SCN5A-210ENST00000455624 TRIM5Q9C035 493 aa12.03□□□□□ -0.48
SCN5A-210ENST00000455624 TMEM132EQ6IEE7 984 aa12.03□□□□□ -0.48
SCN5A-210ENST00000455624 CWC15Q9P013 229 aaKnown RBP12.03□□□□□ -0.48
SCN5A-210ENST00000455624 STIM1Q13586 685 aa12.03□□□□□ -0.48
SCN5A-210ENST00000455624 MAP4K4O95819 1239 aaPredicted RBP12.02□□□□□ -0.48
SCN5A-210ENST00000455624 DDX54Q8TDD1 881 aaKnown RBP12.02□□□□□ -0.48
SCN5A-210ENST00000455624 STK3Q13188 491 aa12.02□□□□□ -0.49
SCN5A-210ENST00000455624 CCDC57Q2TAC2 916 aa12.02□□□□□ -0.49
SCN5A-210ENST00000455624 NUP133Q8WUM0 1156 aa12.02□□□□□ -0.49
SCN5A-210ENST00000455624 DEF6Q9H4E7 631 aa12.02□□□□□ -0.49
SCN5A-210ENST00000455624 H0YHG0 523 aa12.02□□□□□ -0.49
SCN5A-210ENST00000455624 TXNDC2Q86VQ3 553 aa12.02□□□□□ -0.49
SCN5A-210ENST00000455624 TXLNBQ8N3L3 684 aa12.02□□□□□ -0.49
SCN5A-210ENST00000455624 SEPT11Q9NVA2 429 aaKnown RBP12.02□□□□□ -0.49
SCN5A-210ENST00000455624 NOL7Q9UMY1 257 aaKnown RBP12.01□□□□□ -0.49
SCN5A-210ENST00000455624 DESP17661 470 aa12.01□□□□□ -0.49
SCN5A-210ENST00000455624 FAM43AQ8N2R8 423 aa12.01□□□□□ -0.49
SCN5A-210ENST00000455624 SIL1Q9H173 461 aa12.01□□□□□ -0.49
SCN5A-210ENST00000455624 TRIM22Q8IYM9 498 aa12.01□□□□□ -0.49
SCN5A-210ENST00000455624 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
SCN5A-210ENST00000455624 MYL6BP14649 208 aa12.01□□□□□ -0.49
SCN5A-210ENST00000455624 ZNF76P36508 570 aa12.01□□□□□ -0.49
SCN5A-210ENST00000455624 PNISRQ8TF01 805 aaKnown RBP12.01□□□□□ -0.49
SCN5A-210ENST00000455624 NASPP49321 788 aaPredicted RBP12.01□□□□□ -0.49
SCN5A-210ENST00000455624 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
SCN5A-210ENST00000455624 CCDC181Q5TID7 509 aa12.01□□□□□ -0.49
SCN5A-210ENST00000455624 ZSCAN29Q8IWY8 852 aaPredicted RBP12.01□□□□□ -0.49
SCN5A-210ENST00000455624 STAC3Q96MF2 364 aa12.01□□□□□ -0.49
SCN5A-210ENST00000455624 SCAPERQ9BY12 1400 aa12□□□□□ -0.49
SCN5A-210ENST00000455624 SERPINC1P01008 464 aa12□□□□□ -0.49
SCN5A-210ENST00000455624 ENOX2Q16206 610 aaKnown RBP12□□□□□ -0.49
SCN5A-210ENST00000455624 PPFIBP1Q86W92 1011 aa12□□□□□ -0.49
SCN5A-210ENST00000455624 NOB1Q9ULX3 412 aaKnown RBP12□□□□□ -0.49
SCN5A-210ENST00000455624 GOLGA6L10A6NI86 522 aa12□□□□□ -0.49
SCN5A-210ENST00000455624 TWISTNBQ3B726 338 aaPredicted RBP12□□□□□ -0.49
SCN5A-210ENST00000455624 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
SCN5A-210ENST00000455624 IBSPP21815 317 aaPredicted RBP12□□□□□ -0.49
SCN5A-210ENST00000455624 VSIG10Q8N0Z9 540 aa12□□□□□ -0.49
SCN5A-210ENST00000455624 CCDC7Q96M83 1385 aa12□□□□□ -0.49
SCN5A-210ENST00000455624 MPHOSPH8Q99549 860 aa11.99□□□□□ -0.49
SCN5A-210ENST00000455624 LUC7LQ9NQ29 371 aaKnown RBP11.99□□□□□ -0.49
SCN5A-210ENST00000455624 ANKRD1Q15327 319 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms