RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 FAM98CQ17RN3 349 aaKnown RBP27.49■■□□□ 1.99
MSH6-206ENST00000455383 KDM2AQ9Y2K7 1162 aa27.49■■□□□ 1.99
MSH6-206ENST00000455383 SPATA31A5Q5VU36 1347 aa27.46■■□□□ 1.99
MSH6-206ENST00000455383 SPATA31A7Q8IWB4 1347 aa27.46■■□□□ 1.99
MSH6-206ENST00000455383 NGDNQ8NEJ9 315 aaKnown RBP27.45■■□□□ 1.98
MSH6-206ENST00000455383 ATP7BP35670 1465 aa27.44■■□□□ 1.98
MSH6-206ENST00000455383 LRP5O75197 1615 aa27.43■■□□□ 1.98
MSH6-206ENST00000455383 A0A0G2JS52 829 aa27.43■■□□□ 1.98
MSH6-206ENST00000455383 BAG6P46379 1132 aa27.43■■□□□ 1.98
MSH6-206ENST00000455383 MYT1Q01538 1121 aa27.43■■□□□ 1.98
MSH6-206ENST00000455383 ARHGEF28Q8N1W1 1705 aaKnown RBP27.43■■□□□ 1.98
MSH6-206ENST00000455383 THSD7AQ9UPZ6 1657 aa27.43■■□□□ 1.98
MSH6-206ENST00000455383 HRCP23327 699 aa27.42■■□□□ 1.98
MSH6-206ENST00000455383 PAK3O75914 559 aaPredicted RBP27.4■■□□□ 1.98
MSH6-206ENST00000455383 NUDT16Q96DE0 195 aaKnown RBP27.4■■□□□ 1.98
MSH6-206ENST00000455383 ITSN1Q15811 1721 aa27.39■■□□□ 1.98
MSH6-206ENST00000455383 PRDM11Q9NQV5 511 aa27.39■■□□□ 1.98
MSH6-206ENST00000455383 DISP2A7MBM2 1401 aa27.37■■□□□ 1.97
MSH6-206ENST00000455383 RGPD1P0DJD0 1748 aa27.37■■□□□ 1.97
MSH6-206ENST00000455383 SPATA31A1Q5TZJ5 1347 aa27.36■■□□□ 1.97
MSH6-206ENST00000455383 KIAA0232Q92628 1395 aa27.35■■□□□ 1.97
MSH6-206ENST00000455383 POLR3AO14802 1390 aaPredicted RBP27.35■■□□□ 1.97
MSH6-206ENST00000455383 PHRF1Q9P1Y6 1649 aaKnown RBP27.34■■□□□ 1.97
MSH6-206ENST00000455383 EN1Q05925 392 aaPredicted RBP27.34■■□□□ 1.97
MSH6-206ENST00000455383 FAM182BQ5T319 152 aa27.34■■□□□ 1.97
MSH6-206ENST00000455383 PSDA5PKW4 1024 aaPredicted RBP27.33■■□□□ 1.97
MSH6-206ENST00000455383 CDK19Q9BWU1 502 aa27.33■■□□□ 1.97
MSH6-206ENST00000455383 TOPAZ1Q8N9V7 1692 aa27.32■■□□□ 1.96
MSH6-206ENST00000455383 TNS1Q9HBL0 1735 aaKnown RBP27.31■■□□□ 1.96
MSH6-206ENST00000455383 PLEKHG3A1L390 1219 aa27.3■■□□□ 1.96
MSH6-206ENST00000455383 CHRNA2Q15822 529 aa27.3■■□□□ 1.96
MSH6-206ENST00000455383 NBPF8Q3BBV2 869 aa27.29■■□□□ 1.96
MSH6-206ENST00000455383 CCDC61Q9Y6R9 512 aa27.29■■□□□ 1.96
MSH6-206ENST00000455383 ACEP12821 1306 aa27.29■■□□□ 1.96
MSH6-206ENST00000455383 KIAA1210Q9ULL0 1709 aa27.28■■□□□ 1.96
MSH6-206ENST00000455383 ZC3H6P61129 1189 aaKnown RBP27.26■■□□□ 1.95
MSH6-206ENST00000455383 NUTM2GQ5VZR2 741 aa27.25■■□□□ 1.95
MSH6-206ENST00000455383 FAM196AQ6ZSG2 479 aa27.25■■□□□ 1.95
MSH6-206ENST00000455383 STRN4Q9NRL3 753 aa27.25■■□□□ 1.95
MSH6-206ENST00000455383 NRKQ7Z2Y5 1582 aa27.24■■□□□ 1.95
MSH6-206ENST00000455383 BARGINQ6ZT62 677 aa27.24■■□□□ 1.95
MSH6-206ENST00000455383 SSH2Q76I76 1423 aa27.24■■□□□ 1.95
MSH6-206ENST00000455383 CAMKK2Q96RR4 588 aa27.23■■□□□ 1.95
MSH6-206ENST00000455383 CPDO75976 1380 aa27.22■■□□□ 1.95
MSH6-206ENST00000455383 USP19O94966 1318 aa27.22■■□□□ 1.95
MSH6-206ENST00000455383 CAMTA1Q9Y6Y1 1673 aa27.22■■□□□ 1.95
MSH6-206ENST00000455383 EZH2Q15910 746 aaKnown RBP27.22■■□□□ 1.95
MSH6-206ENST00000455383 LMO7Q8WWI1 1683 aa27.21■■□□□ 1.95
MSH6-206ENST00000455383 TRIM37O94972 964 aa27.21■■□□□ 1.95
MSH6-206ENST00000455383 R3HDM1Q15032 1099 aaKnown RBP27.21■■□□□ 1.95
MSH6-206ENST00000455383 NBPF1Q3BBV0 1214 aa27.19■■□□□ 1.94
MSH6-206ENST00000455383 ABTB2Q8N961 1025 aa27.19■■□□□ 1.94
MSH6-206ENST00000455383 PARD3Q8TEW0 1356 aa27.19■■□□□ 1.94
MSH6-206ENST00000455383 EVA1CP58658 441 aa27.18■■□□□ 1.94
MSH6-206ENST00000455383 LARP1Q6PKG0 1096 aaKnown RBP27.17■■□□□ 1.94
MSH6-206ENST00000455383 USP35Q9P2H5 1018 aa27.16■■□□□ 1.94
MSH6-206ENST00000455383 TCP11L2Q8N4U5 519 aa27.15■■□□□ 1.94
MSH6-206ENST00000455383 BRD4O60885 1362 aaPredicted RBP27.14■■□□□ 1.94
MSH6-206ENST00000455383 APBA3O96018 575 aa27.14■■□□□ 1.94
MSH6-206ENST00000455383 PDE3BQ13370 1112 aa27.14■■□□□ 1.94
MSH6-206ENST00000455383 NLRP13Q86W25 1043 aa27.14■■□□□ 1.94
MSH6-206ENST00000455383 PPIP5K1Q6PFW1 1433 aa27.14■■□□□ 1.93
MSH6-206ENST00000455383 GCP02774 474 aa27.13■■□□□ 1.93
MSH6-206ENST00000455383 THRAP3Q9Y2W1 955 aaKnown RBP27.13■■□□□ 1.93
MSH6-206ENST00000455383 CENPJQ9HC77 1338 aaPredicted RBP27.12■■□□□ 1.93
MSH6-206ENST00000455383 RREB1Q92766 1687 aa27.11■■□□□ 1.93
MSH6-206ENST00000455383 SRPK2P78362 688 aaKnown RBP27.11■■□□□ 1.93
MSH6-206ENST00000455383 COL5A2P05997 1499 aaPredicted RBP27.1■■□□□ 1.93
MSH6-206ENST00000455383 CABP2Q9NPB3 220 aa27.09■■□□□ 1.93
MSH6-206ENST00000455383 PARP4Q9UKK3 1724 aaKnown RBP27.08■■□□□ 1.93
MSH6-206ENST00000455383 NUP188Q5SRE5 1749 aa27.06■■□□□ 1.92
MSH6-206ENST00000455383 USP6P35125 1406 aa27.06■■□□□ 1.92
MSH6-206ENST00000455383 CRB1P82279 1406 aa27.05■■□□□ 1.92
MSH6-206ENST00000455383 SLIT3O75094 1523 aa27.05■■□□□ 1.92
MSH6-206ENST00000455383 AATKQ6ZMQ8 1374 aa27.04■■□□□ 1.92
MSH6-206ENST00000455383 QRICH2Q9H0J4 1663 aa27.04■■□□□ 1.92
MSH6-206ENST00000455383 C11orf95C9JLR9 678 aaPredicted RBP27.03■■□□□ 1.92
MSH6-206ENST00000455383 CABP1Q9NZU7 370 aa27.03■■□□□ 1.92
MSH6-206ENST00000455383 PEAK1Q9H792 1746 aa27.01■■□□□ 1.91
MSH6-206ENST00000455383 NLRP6P59044 892 aa27■■□□□ 1.91
MSH6-206ENST00000455383 NBPF14Q5TI25 921 aa27■■□□□ 1.91
MSH6-206ENST00000455383 COL18A1P39060 1754 aa26.99■■□□□ 1.91
MSH6-206ENST00000455383 PIK3C2AO00443 1686 aa26.97■■□□□ 1.91
MSH6-206ENST00000455383 OVOS2A0A0G2JMS6 1433 aa26.97■■□□□ 1.91
MSH6-206ENST00000455383 OVOS2A0A0J9YW53 1432 aa26.97■■□□□ 1.91
MSH6-206ENST00000455383 OVOS2Q6IE36 1432 aa26.97■■□□□ 1.91
MSH6-206ENST00000455383 LRRC37A3O60309 1634 aa26.95■■□□□ 1.91
MSH6-206ENST00000455383 L3MBTL2Q969R5 705 aa26.95■■□□□ 1.9
MSH6-206ENST00000455383 RGPD3A6NKT7 1758 aaPredicted RBP26.94■■□□□ 1.9
MSH6-206ENST00000455383 RGPD4Q7Z3J3 1758 aa26.94■■□□□ 1.9
MSH6-206ENST00000455383 EVC2Q86UK5 1308 aa26.93■■□□□ 1.9
MSH6-206ENST00000455383 AXIN2Q9Y2T1 843 aa26.93■■□□□ 1.9
MSH6-206ENST00000455383 ZBTB7CA1YPR0 619 aa26.92■■□□□ 1.9
MSH6-206ENST00000455383 PLSCR1O15162 318 aa26.92■■□□□ 1.9
MSH6-206ENST00000455383 DDB1Q16531 1140 aa26.92■■□□□ 1.9
MSH6-206ENST00000455383 SBF2Q86WG5 1849 aa26.92■■□□□ 1.9
MSH6-206ENST00000455383 WDR17Q8IZU2 1322 aa26.91■■□□□ 1.9
MSH6-206ENST00000455383 TRPM1Q7Z4N2 1603 aa26.91■■□□□ 1.9
MSH6-206ENST00000455383 TOM1L2Q6ZVM7 507 aa26.91■■□□□ 1.9
MSH6-206ENST00000455383 BCL9O00512 1426 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms