RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 RAB3GAP2Q9H2M9 1393 aa11.21□□□□□ -0.61
LINC00299-204ENST00000454043 ZNF644Q9H582 1327 aaPredicted RBP11.21□□□□□ -0.61
LINC00299-204ENST00000454043 LMOD2Q6P5Q4 547 aa11.21□□□□□ -0.61
LINC00299-204ENST00000454043 PRR14Q9BWN1 585 aa11.21□□□□□ -0.61
LINC00299-204ENST00000454043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.2□□□□□ -0.62
LINC00299-204ENST00000454043 DAPK1P53355 1430 aa11.2□□□□□ -0.62
LINC00299-204ENST00000454043 MINK1Q8N4C8 1332 aaPredicted RBP11.2□□□□□ -0.62
LINC00299-204ENST00000454043 IRF6O14896 467 aa11.2□□□□□ -0.62
LINC00299-204ENST00000454043 MAP2K5Q13163 448 aa11.2□□□□□ -0.62
LINC00299-204ENST00000454043 ZNF516Q92618 1163 aa11.2□□□□□ -0.62
LINC00299-204ENST00000454043 ARHGAP5Q13017 1502 aa11.19□□□□□ -0.62
LINC00299-204ENST00000454043 ABCC5O15440 1437 aa11.19□□□□□ -0.62
LINC00299-204ENST00000454043 KIAA1107Q9UPP5 1409 aa11.19□□□□□ -0.62
LINC00299-204ENST00000454043 RGS20O76081 388 aa11.19□□□□□ -0.62
LINC00299-204ENST00000454043 CHIC2Q9UKJ5 165 aa11.19□□□□□ -0.62
LINC00299-204ENST00000454043 ANKRD30AQ9BXX3 1397 aa11.18□□□□□ -0.62
LINC00299-204ENST00000454043 RIMBP3CA6NJZ7 1639 aa11.18□□□□□ -0.62
LINC00299-204ENST00000454043 RIMBP3BA6NNM3 1639 aa11.18□□□□□ -0.62
LINC00299-204ENST00000454043 RIMBP3Q9UFD9 1639 aa11.18□□□□□ -0.62
LINC00299-204ENST00000454043 NLRP7Q8WX94 980 aa11.18□□□□□ -0.62
LINC00299-204ENST00000454043 ARAP3Q8WWN8 1544 aa11.18□□□□□ -0.62
LINC00299-204ENST00000454043 CDC42BPAQ5VT25 1732 aa11.18□□□□□ -0.62
LINC00299-204ENST00000454043 PTPRKQ15262 1439 aa11.18□□□□□ -0.62
LINC00299-204ENST00000454043 DNMT1P26358 1616 aaKnown RBP11.17□□□□□ -0.62
LINC00299-204ENST00000454043 PREX2Q70Z35 1606 aa11.17□□□□□ -0.62
LINC00299-204ENST00000454043 ACTN4O43707 911 aaKnown RBP11.17□□□□□ -0.62
LINC00299-204ENST00000454043 KMT5BQ4FZB7 885 aa11.17□□□□□ -0.62
LINC00299-204ENST00000454043 RRP7BPQ9NSQ0 103 aa11.17□□□□□ -0.62
LINC00299-204ENST00000454043 HNRNPMP52272 730 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC00299-204ENST00000454043 PCDHB3Q9Y5E6 796 aa11.16□□□□□ -0.62
LINC00299-204ENST00000454043 NAIPQ13075 1403 aa11.16□□□□□ -0.62
LINC00299-204ENST00000454043 MYO5CQ9NQX4 1742 aa11.15□□□□□ -0.62
LINC00299-204ENST00000454043 SHANK2Q9UPX8 1470 aa11.15□□□□□ -0.62
LINC00299-204ENST00000454043 CFHP08603 1231 aa11.15□□□□□ -0.62
LINC00299-204ENST00000454043 COPS2P61201 443 aa11.15□□□□□ -0.62
LINC00299-204ENST00000454043 ARHGEF5Q12774 1597 aa11.15□□□□□ -0.62
LINC00299-204ENST00000454043 TTC37Q6PGP7 1564 aa11.15□□□□□ -0.62
LINC00299-204ENST00000454043 CCDC141Q6ZP82 1450 aa11.14□□□□□ -0.63
LINC00299-204ENST00000454043 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
LINC00299-204ENST00000454043 MAPKBP1O60336 1514 aa11.14□□□□□ -0.63
LINC00299-204ENST00000454043 ABCA9Q8IUA7 1624 aa11.13□□□□□ -0.63
LINC00299-204ENST00000454043 NCOA1Q15788 1441 aa11.13□□□□□ -0.63
LINC00299-204ENST00000454043 ZPR1O75312 459 aa11.13□□□□□ -0.63
LINC00299-204ENST00000454043 NKX2-3Q8TAU0 364 aa11.13□□□□□ -0.63
LINC00299-204ENST00000454043 ADGRL2O95490 1459 aa11.12□□□□□ -0.63
LINC00299-204ENST00000454043 MBD5Q9P267 1494 aa11.12□□□□□ -0.63
LINC00299-204ENST00000454043 CDC42BPBQ9Y5S2 1711 aa11.12□□□□□ -0.63
LINC00299-204ENST00000454043 C9orf84Q5VXU9 1444 aa11.12□□□□□ -0.63
LINC00299-204ENST00000454043 CD109Q6YHK3 1445 aa11.12□□□□□ -0.63
LINC00299-204ENST00000454043 DDX11L8A8MPP1 907 aa11.12□□□□□ -0.63
LINC00299-204ENST00000454043 BLOC1S3Q6QNY0 202 aa11.12□□□□□ -0.63
LINC00299-204ENST00000454043 BARGINQ6ZT62 677 aa11.12□□□□□ -0.63
LINC00299-204ENST00000454043 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
LINC00299-204ENST00000454043 TRIM52Q96A61 297 aa11.12□□□□□ -0.63
LINC00299-204ENST00000454043 ZMYND10O75800 440 aa11.11□□□□□ -0.63
LINC00299-204ENST00000454043 FANCAO15360 1455 aa11.11□□□□□ -0.63
LINC00299-204ENST00000454043 SAMD9LQ8IVG5 1584 aa11.11□□□□□ -0.63
LINC00299-204ENST00000454043 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
LINC00299-204ENST00000454043 PPP1R18Q6NYC8 613 aa11.09□□□□□ -0.63
LINC00299-204ENST00000454043 SULF1Q8IWU6 871 aa11.09□□□□□ -0.63
LINC00299-204ENST00000454043 RDH13Q8NBN7 331 aa11.09□□□□□ -0.63
LINC00299-204ENST00000454043 TIMELESSQ9UNS1 1208 aa11.09□□□□□ -0.63
LINC00299-204ENST00000454043 SPAG9O60271 1321 aaKnown RBP11.09□□□□□ -0.63
LINC00299-204ENST00000454043 GCGRP47871 477 aa11.08□□□□□ -0.64
LINC00299-204ENST00000454043 SYCP2Q9BX26 1530 aa11.08□□□□□ -0.64
LINC00299-204ENST00000454043 ANKRD50Q9ULJ7 1429 aa11.08□□□□□ -0.64
LINC00299-204ENST00000454043 GCC2Q8IWJ2 1684 aa11.08□□□□□ -0.64
LINC00299-204ENST00000454043 ADGBQ8N7X0 1667 aa11.08□□□□□ -0.64
LINC00299-204ENST00000454043 CFAP74Q9C0B2 1584 aa11.07□□□□□ -0.64
LINC00299-204ENST00000454043 KIF15Q9NS87 1388 aa11.07□□□□□ -0.64
LINC00299-204ENST00000454043 FAM69CQ0P6D2 419 aa11.07□□□□□ -0.64
LINC00299-204ENST00000454043 KRI1Q8N9T8 703 aaKnown RBP11.07□□□□□ -0.64
LINC00299-204ENST00000454043 RTEL1-TNFRSF6BF6WH68 1400 aa11.07□□□□□ -0.64
LINC00299-204ENST00000454043 CROCC2H7BZ55 1655 aa11.07□□□□□ -0.64
LINC00299-204ENST00000454043 MAST1Q9Y2H9 1570 aa11.07□□□□□ -0.64
LINC00299-204ENST00000454043 ABCC1P33527 1531 aa11.06□□□□□ -0.64
LINC00299-204ENST00000454043 SCUBE3Q8IX30 993 aa11.06□□□□□ -0.64
LINC00299-204ENST00000454043 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.06□□□□□ -0.64
LINC00299-204ENST00000454043 SCAPERQ9BY12 1400 aa11.06□□□□□ -0.64
LINC00299-204ENST00000454043 GLI2P10070 1586 aa11.06□□□□□ -0.64
LINC00299-204ENST00000454043 ADGRL1O94910 1474 aa11.06□□□□□ -0.64
LINC00299-204ENST00000454043 NEO1Q92859 1461 aa11.06□□□□□ -0.64
LINC00299-204ENST00000454043 SLC24A1O60721 1099 aa11.05□□□□□ -0.64
LINC00299-204ENST00000454043 MDM2Q00987 491 aaPredicted RBP11.05□□□□□ -0.64
LINC00299-204ENST00000454043 MPHOSPH9Q99550 1183 aa11.05□□□□□ -0.64
LINC00299-204ENST00000454043 NR1I2O75469 434 aa11.04□□□□□ -0.64
LINC00299-204ENST00000454043 CD46P15529 392 aa11.04□□□□□ -0.64
LINC00299-204ENST00000454043 PUS10Q3MIT2 529 aaKnown RBP11.04□□□□□ -0.64
LINC00299-204ENST00000454043 AFAP1Q8N556 730 aa11.04□□□□□ -0.64
LINC00299-204ENST00000454043 TMUB1Q9BVT8 246 aa11.04□□□□□ -0.64
LINC00299-204ENST00000454043 ATP6V1AP38606 617 aa11.03□□□□□ -0.64
LINC00299-204ENST00000454043 ARHGEF12Q9NZN5 1544 aa11.03□□□□□ -0.64
LINC00299-204ENST00000454043 TRAPPC8Q9Y2L5 1435 aa11.02□□□□□ -0.64
LINC00299-204ENST00000454043 ZNF518AQ6AHZ1 1483 aa11.02□□□□□ -0.65
LINC00299-204ENST00000454043 FUT2Q10981 343 aa11.02□□□□□ -0.65
LINC00299-204ENST00000454043 TEX14Q8IWB6 1497 aa11.01□□□□□ -0.65
LINC00299-204ENST00000454043 DUOX2Q9NRD8 1548 aa11.01□□□□□ -0.65
LINC00299-204ENST00000454043 MORN1Q5T089 497 aa11.01□□□□□ -0.65
LINC00299-204ENST00000454043 PLXNC1O60486 1568 aa11.01□□□□□ -0.65
LINC00299-204ENST00000454043 ERBINQ96RT1 1412 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms