RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 NWD2Q9ULI1 1742 aa20.8■□□□□ 0.92
HSPG2-207ENST00000453796 SBNO2Q9Y2G9 1366 aa20.79■□□□□ 0.92
HSPG2-207ENST00000453796 RBM6P78332 1123 aaKnown RBP20.78■□□□□ 0.92
HSPG2-207ENST00000453796 CARD11Q9BXL7 1154 aa20.78■□□□□ 0.92
HSPG2-207ENST00000453796 PHRF1Q9P1Y6 1649 aaKnown RBP20.78■□□□□ 0.92
HSPG2-207ENST00000453796 EVC2Q86UK5 1308 aa20.78■□□□□ 0.92
HSPG2-207ENST00000453796 PCGF6Q9BYE7 350 aa20.77■□□□□ 0.92
HSPG2-207ENST00000453796 TRPC5Q9UL62 973 aaPredicted RBP20.77■□□□□ 0.92
HSPG2-207ENST00000453796 RGS12O14924 1447 aa20.77■□□□□ 0.91
HSPG2-207ENST00000453796 AKAP12Q02952 1782 aa20.75■□□□□ 0.91
HSPG2-207ENST00000453796 NRAPQ86VF7 1730 aa20.75■□□□□ 0.91
HSPG2-207ENST00000453796 CLSPNQ9HAW4 1339 aa20.75■□□□□ 0.91
HSPG2-207ENST00000453796 PAK3O75914 559 aaPredicted RBP20.74■□□□□ 0.91
HSPG2-207ENST00000453796 HAP1P54257 671 aaPredicted RBP20.74■□□□□ 0.91
HSPG2-207ENST00000453796 COL14A1Q05707 1796 aaKnown RBP20.74■□□□□ 0.91
HSPG2-207ENST00000453796 PLEKHG5O94827 1062 aa20.73■□□□□ 0.91
HSPG2-207ENST00000453796 GLI3P10071 1580 aa20.72■□□□□ 0.91
HSPG2-207ENST00000453796 UNC5CLQ8IV45 518 aa20.72■□□□□ 0.91
HSPG2-207ENST00000453796 CABP1Q9NZU7 370 aa20.72■□□□□ 0.91
HSPG2-207ENST00000453796 BRD4O60885 1362 aaPredicted RBP20.72■□□□□ 0.91
HSPG2-207ENST00000453796 USP6P35125 1406 aa20.71■□□□□ 0.91
HSPG2-207ENST00000453796 FAM83GA6ND36 823 aa20.7■□□□□ 0.9
HSPG2-207ENST00000453796 SSH2Q76I76 1423 aa20.7■□□□□ 0.9
HSPG2-207ENST00000453796 NRKQ7Z2Y5 1582 aa20.69■□□□□ 0.9
HSPG2-207ENST00000453796 ATAD2Q6PL18 1390 aa20.69■□□□□ 0.9
HSPG2-207ENST00000453796 GJD4Q96KN9 370 aaPredicted RBP20.68■□□□□ 0.9
HSPG2-207ENST00000453796 PIK3C2AO00443 1686 aa20.67■□□□□ 0.9
HSPG2-207ENST00000453796 MON2Q7Z3U7 1717 aa20.67■□□□□ 0.9
HSPG2-207ENST00000453796 TIMELESSQ9UNS1 1208 aa20.67■□□□□ 0.9
HSPG2-207ENST00000453796 USP19O94966 1318 aa20.67■□□□□ 0.9
HSPG2-207ENST00000453796 CPSF1Q10570 1443 aaKnown RBP20.66■□□□□ 0.9
HSPG2-207ENST00000453796 NUTM2GQ5VZR2 741 aa20.65■□□□□ 0.9
HSPG2-207ENST00000453796 ABTB2Q8N961 1025 aa20.65■□□□□ 0.9
HSPG2-207ENST00000453796 BRWD3Q6RI45 1802 aa20.64■□□□□ 0.9
HSPG2-207ENST00000453796 VPS72Q15906 364 aa20.64■□□□□ 0.89
HSPG2-207ENST00000453796 TESK2Q96S53 571 aa20.64■□□□□ 0.89
HSPG2-207ENST00000453796 UPF1Q92900 1129 aaKnown RBP eCLIP20.63■□□□□ 0.89
HSPG2-207ENST00000453796 SLIT3O75094 1523 aa20.63■□□□□ 0.89
HSPG2-207ENST00000453796 CD163L1Q9NR16 1453 aa20.62■□□□□ 0.89
HSPG2-207ENST00000453796 KIAA0232Q92628 1395 aa20.62■□□□□ 0.89
HSPG2-207ENST00000453796 LMO7Q8WWI1 1683 aa20.62■□□□□ 0.89
HSPG2-207ENST00000453796 ZNF692Q9BU19 519 aaPredicted RBP20.62■□□□□ 0.89
HSPG2-207ENST00000453796 BTG4Q9NY30 223 aa20.62■□□□□ 0.89
HSPG2-207ENST00000453796 ST20-MTHFSA0A0A6YYL1 179 aa20.61■□□□□ 0.89
HSPG2-207ENST00000453796 NLRP13Q86W25 1043 aa20.61■□□□□ 0.89
HSPG2-207ENST00000453796 PUS7Q96PZ0 661 aaKnown RBP20.61■□□□□ 0.89
HSPG2-207ENST00000453796 PRDM11Q9NQV5 511 aa20.6■□□□□ 0.89
HSPG2-207ENST00000453796 CPDO75976 1380 aa20.59■□□□□ 0.89
HSPG2-207ENST00000453796 USP54Q70EL1 1684 aa20.59■□□□□ 0.89
HSPG2-207ENST00000453796 TTC21BQ7Z4L5 1316 aa20.58■□□□□ 0.89
HSPG2-207ENST00000453796 ZC3H6P61129 1189 aaKnown RBP20.58■□□□□ 0.89
HSPG2-207ENST00000453796 EP400Q96L91 3159 aa20.58■□□□□ 0.88
HSPG2-207ENST00000453796 USP47Q96K76 1375 aa20.58■□□□□ 0.88
HSPG2-207ENST00000453796 ONECUT3O60422 494 aaPredicted RBP20.57■□□□□ 0.88
HSPG2-207ENST00000453796 GCP02774 474 aa20.57■□□□□ 0.88
HSPG2-207ENST00000453796 CHRNA2Q15822 529 aa20.57■□□□□ 0.88
HSPG2-207ENST00000453796 KTN1Q86UP2 1357 aaKnown RBP20.57■□□□□ 0.88
HSPG2-207ENST00000453796 TTC21AQ8NDW8 1320 aa20.56■□□□□ 0.88
HSPG2-207ENST00000453796 NLRP6P59044 892 aa20.56■□□□□ 0.88
HSPG2-207ENST00000453796 CAMTA1Q9Y6Y1 1673 aa20.56■□□□□ 0.88
HSPG2-207ENST00000453796 COL18A1P39060 1754 aa20.56■□□□□ 0.88
HSPG2-207ENST00000453796 SLC24A1O60721 1099 aa20.54■□□□□ 0.88
HSPG2-207ENST00000453796 CCER1Q8TC90 406 aaPredicted RBP20.54■□□□□ 0.88
HSPG2-207ENST00000453796 SLC12A5Q9H2X9 1139 aa20.54■□□□□ 0.88
HSPG2-207ENST00000453796 THSD7AQ9UPZ6 1657 aa20.54■□□□□ 0.88
HSPG2-207ENST00000453796 SPATA31A5Q5VU36 1347 aa20.53■□□□□ 0.88
HSPG2-207ENST00000453796 SPATA31A7Q8IWB4 1347 aa20.53■□□□□ 0.88
HSPG2-207ENST00000453796 CCDC9Q9Y3X0 531 aaKnown RBP20.53■□□□□ 0.88
HSPG2-207ENST00000453796 A0A1W2PP64 1363 aa20.51■□□□□ 0.87
HSPG2-207ENST00000453796 NINLQ9Y2I6 1382 aa20.51■□□□□ 0.87
HSPG2-207ENST00000453796 SEPT12Q8IYM1 358 aa20.51■□□□□ 0.87
HSPG2-207ENST00000453796 NFAT5O94916 1531 aa20.51■□□□□ 0.87
HSPG2-207ENST00000453796 USP31Q70CQ4 1352 aa20.5■□□□□ 0.87
HSPG2-207ENST00000453796 RGPD5Q99666 1765 aa20.5■□□□□ 0.87
HSPG2-207ENST00000453796 TMC1Q8TDI8 760 aa20.5■□□□□ 0.87
HSPG2-207ENST00000453796 EDC4Q6P2E9 1401 aaKnown RBP20.5■□□□□ 0.87
HSPG2-207ENST00000453796 SPATA31A1Q5TZJ5 1347 aa20.49■□□□□ 0.87
HSPG2-207ENST00000453796 COL5A2P05997 1499 aaPredicted RBP20.49■□□□□ 0.87
HSPG2-207ENST00000453796 FAM98CQ17RN3 349 aaKnown RBP20.48■□□□□ 0.87
HSPG2-207ENST00000453796 HDGFL2Q7Z4V5 671 aaPredicted RBP20.48■□□□□ 0.87
HSPG2-207ENST00000453796 AATKQ6ZMQ8 1374 aa20.47■□□□□ 0.87
HSPG2-207ENST00000453796 TMF1P82094 1093 aa20.47■□□□□ 0.87
HSPG2-207ENST00000453796 STRN4Q9NRL3 753 aa20.47■□□□□ 0.87
HSPG2-207ENST00000453796 TERF2IPQ9NYB0 399 aa20.47■□□□□ 0.87
HSPG2-207ENST00000453796 MYOM1P52179 1685 aa20.47■□□□□ 0.87
HSPG2-207ENST00000453796 ZRANB1Q9UGI0 708 aa20.46■□□□□ 0.87
HSPG2-207ENST00000453796 LTN1O94822 1766 aa20.45■□□□□ 0.86
HSPG2-207ENST00000453796 ARHGEF25Q86VW2 580 aa20.45■□□□□ 0.86
HSPG2-207ENST00000453796 NME9Q86XW9 330 aa20.45■□□□□ 0.86
HSPG2-207ENST00000453796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.45■□□□□ 0.86
HSPG2-207ENST00000453796 KCNH5Q8NCM2 988 aa20.45■□□□□ 0.86
HSPG2-207ENST00000453796 LARP1Q6PKG0 1096 aaKnown RBP20.44■□□□□ 0.86
HSPG2-207ENST00000453796 OVOS2A0A0J9YW53 1432 aa20.44■□□□□ 0.86
HSPG2-207ENST00000453796 OVOS2Q6IE36 1432 aa20.44■□□□□ 0.86
HSPG2-207ENST00000453796 ABCC6O95255 1503 aa20.43■□□□□ 0.86
HSPG2-207ENST00000453796 KRT27Q7Z3Y8 459 aa20.43■□□□□ 0.86
HSPG2-207ENST00000453796 ANKRD36BQ8N2N9 1353 aa20.43■□□□□ 0.86
HSPG2-207ENST00000453796 EVA1CP58658 441 aa20.42■□□□□ 0.86
HSPG2-207ENST00000453796 WNK3Q9BYP7 1800 aa20.41■□□□□ 0.86
HSPG2-207ENST00000453796 BARGINQ6ZT62 677 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms